Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10c14
         (542 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81088-4|CAB03125.1|  105|Caenorhabditis elegans Hypothetical pr...    33   0.18 
AF003141-14|AAM48549.1|  362|Caenorhabditis elegans Hypothetical...    30   1.2  
AF003141-13|AAK21490.1|  549|Caenorhabditis elegans Hypothetical...    30   1.2  
U97194-8|AAB52447.3| 1254|Caenorhabditis elegans Prion-like-(q/n...    29   2.2  
AF100656-11|AAF99960.1|  115|Caenorhabditis elegans Hypothetical...    29   2.2  
Z81486-7|CAB03989.1|  480|Caenorhabditis elegans Hypothetical pr...    29   2.9  
Z29443-7|CAA82571.2|  497|Caenorhabditis elegans Hypothetical pr...    28   3.8  
Z70312-3|CAA94385.1|  172|Caenorhabditis elegans Hypothetical pr...    28   5.0  
AF039046-3|ABP57815.1|   51|Caenorhabditis elegans Caenacin (cae...    28   5.0  
Z70781-5|CAE17848.1|   78|Caenorhabditis elegans Hypothetical pr...    27   6.6  
U58748-10|AAB52970.2|  701|Caenorhabditis elegans Hypothetical p...    27   6.6  
Z77663-2|CAB01209.1|  215|Caenorhabditis elegans Hypothetical pr...    27   8.7  
Z72514-1|CAA96674.1|  428|Caenorhabditis elegans Hypothetical pr...    27   8.7  
U02289-1|AAA18934.1| 1439|Caenorhabditis elegans GTPase-activati...    27   8.7  
AF067219-3|AAC17027.1|   74|Caenorhabditis elegans Hypothetical ...    27   8.7  
AC024790-13|AAL32247.1|  311|Caenorhabditis elegans Hypothetical...    27   8.7  

>Z81088-4|CAB03125.1|  105|Caenorhabditis elegans Hypothetical
           protein F53F1.4 protein.
          Length = 105

 Score = 32.7 bits (71), Expect = 0.18
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = +1

Query: 193 SPCGGASSAPIPTYPSAGYHGQAPAQAGYGT 285
           +PCGGA+ A +   P+AGY    PA  GY T
Sbjct: 72  APCGGAAPAYVAPPPAAGYAAPPPA-GGYAT 101


>AF003141-14|AAM48549.1|  362|Caenorhabditis elegans Hypothetical
           protein W02D3.11b protein.
          Length = 362

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
 Frame = +1

Query: 145 QDYFRDKRSQYGTYYTSPCGGASSAPIPTYPSAGYHGQAPAQAGYGTNYVYGGPHYR-LA 321
           QDY    R+ Y  Y T P    SS P    PSAGY+     +  Y +     GP  R + 
Sbjct: 269 QDY--GVRASYDPY-TQPAAPVSSYPSQQQPSAGYYDNYAPKTAYESYGRERGPDPRDVR 325

Query: 322 DPAE 333
           DP +
Sbjct: 326 DPRD 329


>AF003141-13|AAK21490.1|  549|Caenorhabditis elegans Hypothetical
           protein W02D3.11a protein.
          Length = 549

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
 Frame = +1

Query: 145 QDYFRDKRSQYGTYYTSPCGGASSAPIPTYPSAGYHGQAPAQAGYGTNYVYGGPHYR-LA 321
           QDY    R+ Y  Y T P    SS P    PSAGY+     +  Y +     GP  R + 
Sbjct: 269 QDY--GVRASYDPY-TQPAAPVSSYPSQQQPSAGYYDNYAPKTAYESYGRERGPDPRDVR 325

Query: 322 DPAE 333
           DP +
Sbjct: 326 DPRD 329


>U97194-8|AAB52447.3| 1254|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 20
           protein.
          Length = 1254

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +1

Query: 226 PTYPSAGYHGQAPAQAGYGTNYVYGG 303
           P YP  GY G  P Q  +   Y+ GG
Sbjct: 716 PGYPGQGYPGMPPPQGAFPPGYLPGG 741


>AF100656-11|AAF99960.1|  115|Caenorhabditis elegans Hypothetical
           protein F49F1.12 protein.
          Length = 115

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
 Frame = +1

Query: 115 PDTKGSLRNGQDYFRDKRSQYGTYYTSP-CGGASSAPIPT-YPSAGYHGQ 258
           PD K + R+     R KR + GT   S  C G+ S PIP   PS G   Q
Sbjct: 56  PDVKSTQRSANQN-RQKRQRCGTSRCSDSCSGSRSTPIPACRPSNGTWNQ 104


>Z81486-7|CAB03989.1|  480|Caenorhabditis elegans Hypothetical
           protein C53A5.9 protein.
          Length = 480

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
 Frame = +1

Query: 127 GSLRNGQDYFRDKRSQYGTYYTSPCGGASSAPIPTYPSAGYH-GQAPAQAGYGTNYVYGG 303
           G   NGQ  F +K   Y     + C GA+     T P+AG+H G      GY + Y+   
Sbjct: 241 GGTHNGQ--FLNKFEYYNQKKNARCMGANLNHKRTKPAAGFHNGALYVVGGYDSIYLSSV 298

Query: 304 PHYRLAD 324
             Y L +
Sbjct: 299 ELYDLEE 305


>Z29443-7|CAA82571.2|  497|Caenorhabditis elegans Hypothetical
           protein T07C4.9a protein.
          Length = 497

 Score = 28.3 bits (60), Expect = 3.8
 Identities = 24/72 (33%), Positives = 30/72 (41%), Gaps = 2/72 (2%)
 Frame = +1

Query: 97  GAPSVLPDTKGSLRNGQDYFRDKRSQYGTYYTSPCGGASSAPIPTYPSAGYHGQAPAQAG 276
           G   VL +  G L  G +  +   SQ  +   S        P    PS G +GQ P Q G
Sbjct: 10  GIQDVLDNKLGGL-GGNNKQQQPSSQQSSQEPSNMNSGGGYP-NQQPSYGGYGQPPQQPG 67

Query: 277 YGT-NY-VYGGP 306
           YG  +Y  YG P
Sbjct: 68  YGNGSYDPYGQP 79


>Z70312-3|CAA94385.1|  172|Caenorhabditis elegans Hypothetical
           protein ZC168.5 protein.
          Length = 172

 Score = 27.9 bits (59), Expect = 5.0
 Identities = 18/48 (37%), Positives = 19/48 (39%)
 Frame = +1

Query: 196 PCGGASSAPIPTYPSAGYHGQAPAQAGYGTNYVYGGPHYRLADPAEFD 339
           PCGG   AP P  P   Y G  P+ AG      YG   YR       D
Sbjct: 46  PCGGGYEAP-PPPPPPSYAG-GPSYAGPSYAGSYGPGPYRAKSKRSVD 91


>AF039046-3|ABP57815.1|   51|Caenorhabditis elegans Caenacin
           (caenorhabditis bacteriocin)protein 11 protein.
          Length = 51

 Score = 27.9 bits (59), Expect = 5.0
 Identities = 11/16 (68%), Positives = 11/16 (68%)
 Frame = +1

Query: 265 AQAGYGTNYVYGGPHY 312
           AQ GYG NY YG P Y
Sbjct: 18  AQYGYGYNYGYGAPMY 33


>Z70781-5|CAE17848.1|   78|Caenorhabditis elegans Hypothetical
           protein F57A8.8 protein.
          Length = 78

 Score = 27.5 bits (58), Expect = 6.6
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = +1

Query: 223 IPTYPSAGYHGQAPAQAGYGTNYVYGG 303
           I T  S  Y+G  P  +GY  N VYGG
Sbjct: 12  ILTITSGQYYGGYPTASGYYGNGVYGG 38


>U58748-10|AAB52970.2|  701|Caenorhabditis elegans Hypothetical
           protein ZK180.6 protein.
          Length = 701

 Score = 27.5 bits (58), Expect = 6.6
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +1

Query: 193 SPCGGASSAPIPTYPSA 243
           +PCGG  +AP P Y +A
Sbjct: 44  NPCGGGGAAPAPVYAAA 60


>Z77663-2|CAB01209.1|  215|Caenorhabditis elegans Hypothetical
           protein F53F4.2 protein.
          Length = 215

 Score = 27.1 bits (57), Expect = 8.7
 Identities = 13/48 (27%), Positives = 18/48 (37%)
 Frame = +1

Query: 169 SQYGTYYTSPCGGASSAPIPTYPSAGYHGQAPAQAGYGTNYVYGGPHY 312
           S Y +Y  +      +  +P Y   GY G       YG +Y    P Y
Sbjct: 107 SLYQSYMNAGVPRQQTVLVPVYTQGGYGGAYGGYPSYGQSYGQSYPSY 154


>Z72514-1|CAA96674.1|  428|Caenorhabditis elegans Hypothetical
           protein T10B10.1 protein.
          Length = 428

 Score = 27.1 bits (57), Expect = 8.7
 Identities = 15/54 (27%), Positives = 22/54 (40%)
 Frame = +1

Query: 196 PCGGASSAPIPTYPSAGYHGQAPAQAGYGTNYVYGGPHYRLADPAEFDPEMLGY 357
           P   + S P P+YPS  Y   +     Y +      P Y +  PA+ +    GY
Sbjct: 360 PAHPSPSYPSPSYPSPSYPSPSYPSPSYPSPSYPAEPAYSVPPPAKPEQPSGGY 413


>U02289-1|AAA18934.1| 1439|Caenorhabditis elegans GTPase-activating
           protein protein.
          Length = 1439

 Score = 27.1 bits (57), Expect = 8.7
 Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
 Frame = +1

Query: 115 PDTKGSLRNGQDYFRDKRSQYGTYYTSP-CGGASSAPIP-TYPSAGYHGQAPAQAGYGTN 288
           P  +G+L     YFRD  +++G+  +SP  GG S   +P T   A   G AP      T+
Sbjct: 30  PLARGALSPAA-YFRDLENRHGSGASSPIVGGLSVVAVPITQRHAPTAGLAPISDDISTS 88

Query: 289 YV 294
            V
Sbjct: 89  KV 90


>AF067219-3|AAC17027.1|   74|Caenorhabditis elegans Hypothetical
           protein R12E2.6 protein.
          Length = 74

 Score = 27.1 bits (57), Expect = 8.7
 Identities = 11/29 (37%), Positives = 13/29 (44%)
 Frame = +1

Query: 193 SPCGGASSAPIPTYPSAGYHGQAPAQAGY 279
           +PCGG    P P +   GY    P   GY
Sbjct: 41  NPCGGGFGPPPPPFGPVGYALPPPPPNGY 69


>AC024790-13|AAL32247.1|  311|Caenorhabditis elegans Hypothetical
           protein Y47D7A.13 protein.
          Length = 311

 Score = 27.1 bits (57), Expect = 8.7
 Identities = 20/54 (37%), Positives = 22/54 (40%), Gaps = 3/54 (5%)
 Frame = +1

Query: 127 GSLRNGQDYFRDKRSQYGTYYTSPC--GGASSAPIPTYPSAGYHGQAPAQ-AGY 279
           G +  G  Y     +Q   Y   P   GGA          AGY  QAPAQ AGY
Sbjct: 153 GPIGGGAGYQGGAPAQGAGYQQGPAVGGGAGYQQQAPAQGAGYQQQAPAQGAGY 206


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,670,953
Number of Sequences: 27780
Number of extensions: 271743
Number of successful extensions: 883
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 818
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 875
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1091917214
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)