Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10c08
(607 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U70735-1|AAD03469.1| 297|Homo sapiens 34 kDa Mov34 homolog prot... 101 3e-21
BC002520-1|AAH02520.2| 327|Homo sapiens COP9 constitutive photo... 101 3e-21
D50063-1|BAA08780.1| 324|Homo sapiens proteasome subunit p40 / ... 40 0.009
BC012606-1|AAH12606.1| 324|Homo sapiens proteasome (prosome, ma... 40 0.009
BC000338-1|AAH00338.1| 326|Homo sapiens PSMD7 protein protein. 40 0.009
AF354444-1|AAK18634.1| 348|Homo sapiens IFP38 protein. 35 0.19
U94855-1|AAD03467.1| 357|Homo sapiens translation initiation fa... 34 0.45
CR456959-1|CAG33240.1| 357|Homo sapiens EIF3S5 protein. 34 0.45
BT006894-1|AAP35540.1| 357|Homo sapiens eukaryotic translation ... 34 0.45
BC000490-1|AAH00490.1| 357|Homo sapiens eukaryotic translation ... 34 0.45
AK095574-1|BAC04577.1| 350|Homo sapiens protein ( Homo sapiens ... 34 0.45
Y19188-1|CAB60727.1| 759|Homo sapiens aczonin protein. 30 7.3
BC125271-1|AAI25272.1| 641|Homo sapiens PCLO protein protein. 30 7.3
BC122565-1|AAI22566.1| 641|Homo sapiens PCLO protein protein. 30 7.3
L25270-1|AAA61302.1| 1560|Homo sapiens XE169 protein. 29 9.6
BC054499-1|AAH54499.1| 1559|Homo sapiens jumonji, AT rich intera... 29 9.6
AL139396-7|CAI39836.1| 1560|Homo sapiens jumonji, AT rich intera... 29 9.6
AL139396-6|CAI39837.1| 1516|Homo sapiens jumonji, AT rich intera... 29 9.6
AL139396-5|CAI39838.1| 1557|Homo sapiens jumonji, AT rich intera... 29 9.6
>U70735-1|AAD03469.1| 297|Homo sapiens 34 kDa Mov34 homolog
protein.
Length = 297
Score = 101 bits (241), Expect = 3e-21
Identities = 46/76 (60%), Positives = 56/76 (73%)
Frame = +2
Query: 380 LHPLVIMNVSEHWTRLKAQEGFPQTVVGALIGKQKGRNIEVMNSFELVFSMXXXXXXXXX 559
LHPLVI+N+S+HW R+++QEG P V+GALIGKQ+GRNIEVMNSFEL+
Sbjct: 13 LHPLVILNISDHWIRMRSQEGRPVQVIGALIGKQEGRNIEVMNSFELLSHTVEEKIIIDK 72
Query: 560 XYYNMKEEQFKQVFSD 607
YY KEEQFKQVF +
Sbjct: 73 EYYYTKEEQFKQVFKE 88
>BC002520-1|AAH02520.2| 327|Homo sapiens COP9 constitutive
photomorphogenic homolog subunit 6 (Arabidopsis)
protein.
Length = 327
Score = 101 bits (241), Expect = 3e-21
Identities = 46/76 (60%), Positives = 56/76 (73%)
Frame = +2
Query: 380 LHPLVIMNVSEHWTRLKAQEGFPQTVVGALIGKQKGRNIEVMNSFELVFSMXXXXXXXXX 559
LHPLVI+N+S+HW R+++QEG P V+GALIGKQ+GRNIEVMNSFEL+
Sbjct: 43 LHPLVILNISDHWIRMRSQEGRPVQVIGALIGKQEGRNIEVMNSFELLSHTVEEKIIIDK 102
Query: 560 XYYNMKEEQFKQVFSD 607
YY KEEQFKQVF +
Sbjct: 103 EYYYTKEEQFKQVFKE 118
>D50063-1|BAA08780.1| 324|Homo sapiens proteasome subunit p40 /
Mov34 protein protein.
Length = 324
Score = 39.5 bits (88), Expect = 0.009
Identities = 18/49 (36%), Positives = 33/49 (67%)
Frame = +2
Query: 380 LHPLVIMNVSEHWTRLKAQEGFPQTVVGALIGKQKGRNIEVMNSFELVF 526
+HPLV+++V +H+ R+ + G + VVG L+G + + ++V NSF + F
Sbjct: 11 VHPLVLLSVVDHFNRI-VKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPF 58
>BC012606-1|AAH12606.1| 324|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 7 (Mov34 homolog)
protein.
Length = 324
Score = 39.5 bits (88), Expect = 0.009
Identities = 18/49 (36%), Positives = 33/49 (67%)
Frame = +2
Query: 380 LHPLVIMNVSEHWTRLKAQEGFPQTVVGALIGKQKGRNIEVMNSFELVF 526
+HPLV+++V +H+ R+ + G + VVG L+G + + ++V NSF + F
Sbjct: 11 VHPLVLLSVVDHFNRI-GKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPF 58
>BC000338-1|AAH00338.1| 326|Homo sapiens PSMD7 protein protein.
Length = 326
Score = 39.5 bits (88), Expect = 0.009
Identities = 18/49 (36%), Positives = 33/49 (67%)
Frame = +2
Query: 380 LHPLVIMNVSEHWTRLKAQEGFPQTVVGALIGKQKGRNIEVMNSFELVF 526
+HPLV+++V +H+ R+ + G + VVG L+G + + ++V NSF + F
Sbjct: 11 VHPLVLLSVVDHFNRI-GKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPF 58
>AF354444-1|AAK18634.1| 348|Homo sapiens IFP38 protein.
Length = 348
Score = 35.1 bits (77), Expect = 0.19
Identities = 23/89 (25%), Positives = 41/89 (46%)
Frame = +2
Query: 263 ASSGPPIEVPNPTSPAPTTPGSNKXXXXXXXXXXXXXXXLHPLVIMNVSEHWTRLKAQEG 442
AS+ P++ P PT P P PG LHP+++ + + + R +G
Sbjct: 54 ASAQAPVQTPAPTLPGPALPG---------PFPGGRVVRLHPVLLASTVDSYER--RNKG 102
Query: 443 FPQTVVGALIGKQKGRNIEVMNSFELVFS 529
+ V+G L+G ++EV N F + ++
Sbjct: 103 AAR-VIGTLLGTVNKHSVEVTNCFSVSYN 130
>U94855-1|AAD03467.1| 357|Homo sapiens translation initiation
factor 3 47 kDa subunit protein.
Length = 357
Score = 33.9 bits (74), Expect = 0.45
Identities = 23/86 (26%), Positives = 38/86 (44%)
Frame = +2
Query: 263 ASSGPPIEVPNPTSPAPTTPGSNKXXXXXXXXXXXXXXXLHPLVIMNVSEHWTRLKAQEG 442
AS+ P + P P P P PG LHP+++ ++ + + R EG
Sbjct: 64 ASAQAPAQTPAPALPGPALPG---------PFPGGRVVRLHPVILASIVDSYER--RNEG 112
Query: 443 FPQTVVGALIGKQKGRNIEVMNSFEL 520
+ V+G L+G ++EV N F +
Sbjct: 113 AAR-VIGTLLGTVDKHSVEVTNCFSV 137
>CR456959-1|CAG33240.1| 357|Homo sapiens EIF3S5 protein.
Length = 357
Score = 33.9 bits (74), Expect = 0.45
Identities = 23/86 (26%), Positives = 38/86 (44%)
Frame = +2
Query: 263 ASSGPPIEVPNPTSPAPTTPGSNKXXXXXXXXXXXXXXXLHPLVIMNVSEHWTRLKAQEG 442
AS+ P + P P P P PG LHP+++ ++ + + R EG
Sbjct: 64 ASAQAPAQTPAPALPGPALPG---------PFPGGRVVRLHPVILASIVDSYER--RNEG 112
Query: 443 FPQTVVGALIGKQKGRNIEVMNSFEL 520
+ V+G L+G ++EV N F +
Sbjct: 113 AAR-VIGTLLGTVDKHSVEVTNCFSV 137
>BT006894-1|AAP35540.1| 357|Homo sapiens eukaryotic translation
initiation factor 3, subunit 5 epsilon, 47kDa protein.
Length = 357
Score = 33.9 bits (74), Expect = 0.45
Identities = 23/86 (26%), Positives = 38/86 (44%)
Frame = +2
Query: 263 ASSGPPIEVPNPTSPAPTTPGSNKXXXXXXXXXXXXXXXLHPLVIMNVSEHWTRLKAQEG 442
AS+ P + P P P P PG LHP+++ ++ + + R EG
Sbjct: 64 ASAQAPAQTPAPALPGPALPG---------PFPGGRVVRLHPVILASIVDSYER--RNEG 112
Query: 443 FPQTVVGALIGKQKGRNIEVMNSFEL 520
+ V+G L+G ++EV N F +
Sbjct: 113 AAR-VIGTLLGTVDKHSVEVTNCFSV 137
>BC000490-1|AAH00490.1| 357|Homo sapiens eukaryotic translation
initiation factor 3, subunit 5 epsilon, 47kDa protein.
Length = 357
Score = 33.9 bits (74), Expect = 0.45
Identities = 23/86 (26%), Positives = 38/86 (44%)
Frame = +2
Query: 263 ASSGPPIEVPNPTSPAPTTPGSNKXXXXXXXXXXXXXXXLHPLVIMNVSEHWTRLKAQEG 442
AS+ P + P P P P PG LHP+++ ++ + + R EG
Sbjct: 64 ASAQAPAQTPAPALPGPALPG---------PFPGGRVVRLHPVILASIVDSYER--RNEG 112
Query: 443 FPQTVVGALIGKQKGRNIEVMNSFEL 520
+ V+G L+G ++EV N F +
Sbjct: 113 AAR-VIGTLLGTVDKHSVEVTNCFSV 137
>AK095574-1|BAC04577.1| 350|Homo sapiens protein ( Homo sapiens
cDNA FLJ38255 fis, clone FCBBF3001020, highly similar to
EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 5. ).
Length = 350
Score = 33.9 bits (74), Expect = 0.45
Identities = 23/86 (26%), Positives = 38/86 (44%)
Frame = +2
Query: 263 ASSGPPIEVPNPTSPAPTTPGSNKXXXXXXXXXXXXXXXLHPLVIMNVSEHWTRLKAQEG 442
AS+ P + P P P P PG LHP+++ ++ + + R EG
Sbjct: 57 ASAQAPAQTPAPALPGPALPG---------PFPGGRVVRLHPVILASIVDSYER--RNEG 105
Query: 443 FPQTVVGALIGKQKGRNIEVMNSFEL 520
+ V+G L+G ++EV N F +
Sbjct: 106 AAR-VIGTLLGTVDKHSVEVTNCFSV 130
>Y19188-1|CAB60727.1| 759|Homo sapiens aczonin protein.
Length = 759
Score = 29.9 bits (64), Expect = 7.3
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +2
Query: 257 ESASSGPPIEVPNPTSPAPTTPGSNK 334
+ S+ PP + P P P+P PGS K
Sbjct: 413 QPGSTKPPPQQPGPAKPSPQQPGSTK 438
>BC125271-1|AAI25272.1| 641|Homo sapiens PCLO protein protein.
Length = 641
Score = 29.9 bits (64), Expect = 7.3
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +2
Query: 257 ESASSGPPIEVPNPTSPAPTTPGSNK 334
+ S+ PP + P P P+P PGS K
Sbjct: 483 QPGSTKPPPQQPGPAKPSPQQPGSTK 508
>BC122565-1|AAI22566.1| 641|Homo sapiens PCLO protein protein.
Length = 641
Score = 29.9 bits (64), Expect = 7.3
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +2
Query: 257 ESASSGPPIEVPNPTSPAPTTPGSNK 334
+ S+ PP + P P P+P PGS K
Sbjct: 483 QPGSTKPPPQQPGPAKPSPQQPGSTK 508
>L25270-1|AAA61302.1| 1560|Homo sapiens XE169 protein.
Length = 1560
Score = 29.5 bits (63), Expect = 9.6
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +2
Query: 188 EFSYPRVKMSS--ADRIDFEMEVEVESASSGPPIEVPNPTSPA 310
E RV+ S A+ + E E+E E+ GPP +P SP+
Sbjct: 1476 ELEPKRVRSSGPEAEEVQEEEELEEETGGEGPPAPIPTTGSPS 1518
>BC054499-1|AAH54499.1| 1559|Homo sapiens jumonji, AT rich interactive
domain 1C protein.
Length = 1559
Score = 29.5 bits (63), Expect = 9.6
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +2
Query: 188 EFSYPRVKMSS--ADRIDFEMEVEVESASSGPPIEVPNPTSPA 310
E RV+ S A+ + E E+E E+ GPP +P SP+
Sbjct: 1475 ELEPKRVRSSGPEAEEVQEEEELEEETGGEGPPAPIPTTGSPS 1517
>AL139396-7|CAI39836.1| 1560|Homo sapiens jumonji, AT rich interactive
domain 1C protein.
Length = 1560
Score = 29.5 bits (63), Expect = 9.6
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +2
Query: 188 EFSYPRVKMSS--ADRIDFEMEVEVESASSGPPIEVPNPTSPA 310
E RV+ S A+ + E E+E E+ GPP +P SP+
Sbjct: 1476 ELEPKRVRSSGPEAEEVQEEEELEEETGGEGPPAPIPTTGSPS 1518
>AL139396-6|CAI39837.1| 1516|Homo sapiens jumonji, AT rich interactive
domain 1C protein.
Length = 1516
Score = 29.5 bits (63), Expect = 9.6
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +2
Query: 188 EFSYPRVKMSS--ADRIDFEMEVEVESASSGPPIEVPNPTSPA 310
E RV+ S A+ + E E+E E+ GPP +P SP+
Sbjct: 1432 ELEPKRVRSSGPEAEEVQEEEELEEETGGEGPPAPIPTTGSPS 1474
>AL139396-5|CAI39838.1| 1557|Homo sapiens jumonji, AT rich interactive
domain 1C protein.
Length = 1557
Score = 29.5 bits (63), Expect = 9.6
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +2
Query: 188 EFSYPRVKMSS--ADRIDFEMEVEVESASSGPPIEVPNPTSPA 310
E RV+ S A+ + E E+E E+ GPP +P SP+
Sbjct: 1473 ELEPKRVRSSGPEAEEVQEEEELEEETGGEGPPAPIPTTGSPS 1515
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,017,010
Number of Sequences: 237096
Number of extensions: 1359722
Number of successful extensions: 4676
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 4165
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4653
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6410414940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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