Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10c08
         (607 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070607-1|AAL48078.1|  341|Drosophila melanogaster RE71054p pro...   109   4e-24
AE014297-3186|AAF56022.1|  341|Drosophila melanogaster CG6932-PA...   109   4e-24
AE014297-1933|AAF55130.1|  537|Drosophila melanogaster CG3984-PA...    31   1.6  
AY095051-1|AAM11379.1| 1838|Drosophila melanogaster LD40310p pro...    29   4.9  
AE014134-1014|AAN10569.1| 1838|Drosophila melanogaster CG9088-PB...    29   4.9  
AE014134-1013|AAF52319.1| 1838|Drosophila melanogaster CG9088-PA...    29   4.9  

>AY070607-1|AAL48078.1|  341|Drosophila melanogaster RE71054p
           protein.
          Length = 341

 Score =  109 bits (261), Expect = 4e-24
 Identities = 50/76 (65%), Positives = 57/76 (75%)
 Frame = +2

Query: 380 LHPLVIMNVSEHWTRLKAQEGFPQTVVGALIGKQKGRNIEVMNSFELVFSMXXXXXXXXX 559
           LHPLVIMN+SEHWTR +AQ G P+ V GALIGKQKGRNIE+MNSFEL   +         
Sbjct: 56  LHPLVIMNISEHWTRFRAQHGEPRQVYGALIGKQKGRNIEIMNSFELKTDVIGDETVINK 115

Query: 560 XYYNMKEEQFKQVFSD 607
            YYN KE+Q+KQVFSD
Sbjct: 116 DYYNKKEQQYKQVFSD 131


>AE014297-3186|AAF56022.1|  341|Drosophila melanogaster CG6932-PA
           protein.
          Length = 341

 Score =  109 bits (261), Expect = 4e-24
 Identities = 50/76 (65%), Positives = 57/76 (75%)
 Frame = +2

Query: 380 LHPLVIMNVSEHWTRLKAQEGFPQTVVGALIGKQKGRNIEVMNSFELVFSMXXXXXXXXX 559
           LHPLVIMN+SEHWTR +AQ G P+ V GALIGKQKGRNIE+MNSFEL   +         
Sbjct: 56  LHPLVIMNISEHWTRFRAQHGEPRQVYGALIGKQKGRNIEIMNSFELKTDVIGDETVINK 115

Query: 560 XYYNMKEEQFKQVFSD 607
            YYN KE+Q+KQVFSD
Sbjct: 116 DYYNKKEQQYKQVFSD 131


>AE014297-1933|AAF55130.1|  537|Drosophila melanogaster CG3984-PA
           protein.
          Length = 537

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = +2

Query: 266 SSGPPIEVPNPTSPAPTTPGS 328
           ++GP I  P+PTSP  TTP S
Sbjct: 238 TNGPSINAPSPTSPPTTTPPS 258


>AY095051-1|AAM11379.1| 1838|Drosophila melanogaster LD40310p protein.
          Length = 1838

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 19/84 (22%), Positives = 40/84 (47%)
 Frame = +2

Query: 20   IKNYRTATNNYHQSVERKILLSNHKY*IANTDKLIAIIETIQIFISHYIVL*FQFIEFSY 199
            I   RT +++  ++ + K+ +   +  +   D L  II+     +   +VL  QF+E S 
Sbjct: 957  INKVRTRSDHNQEAAQYKLTMEELELFVQEIDNLCCIIDE-GASVRELLVLGKQFVERSE 1015

Query: 200  PRVKMSSADRIDFEMEVEVESASS 271
             ++++S     + E+E  +   SS
Sbjct: 1016 SQLQLSLESLEESELETLINEGSS 1039


>AE014134-1014|AAN10569.1| 1838|Drosophila melanogaster CG9088-PB,
            isoform B protein.
          Length = 1838

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 19/84 (22%), Positives = 40/84 (47%)
 Frame = +2

Query: 20   IKNYRTATNNYHQSVERKILLSNHKY*IANTDKLIAIIETIQIFISHYIVL*FQFIEFSY 199
            I   RT +++  ++ + K+ +   +  +   D L  II+     +   +VL  QF+E S 
Sbjct: 957  INKVRTRSDHNQEAAQYKLTMEELELFVQEIDNLCCIIDE-GASVRELLVLGKQFVERSE 1015

Query: 200  PRVKMSSADRIDFEMEVEVESASS 271
             ++++S     + E+E  +   SS
Sbjct: 1016 SQLQLSLESLEESELETLINEGSS 1039


>AE014134-1013|AAF52319.1| 1838|Drosophila melanogaster CG9088-PA,
            isoform A protein.
          Length = 1838

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 19/84 (22%), Positives = 40/84 (47%)
 Frame = +2

Query: 20   IKNYRTATNNYHQSVERKILLSNHKY*IANTDKLIAIIETIQIFISHYIVL*FQFIEFSY 199
            I   RT +++  ++ + K+ +   +  +   D L  II+     +   +VL  QF+E S 
Sbjct: 957  INKVRTRSDHNQEAAQYKLTMEELELFVQEIDNLCCIIDE-GASVRELLVLGKQFVERSE 1015

Query: 200  PRVKMSSADRIDFEMEVEVESASS 271
             ++++S     + E+E  +   SS
Sbjct: 1016 SQLQLSLESLEESELETLINEGSS 1039


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,981,082
Number of Sequences: 53049
Number of extensions: 443905
Number of successful extensions: 1793
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1659
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1784
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2482967880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)