Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10c08
         (607 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132951-5|CAC44307.1|  426|Caenorhabditis elegans Hypothetical ...    57   8e-09
U00055-2|AAA50721.1|  223|Caenorhabditis elegans Hypothetical pr...    29   2.6  
Z82083-3|CAB04971.1|  756|Caenorhabditis elegans Hypothetical pr...    28   5.9  
U27312-10|AAA68253.1|  231|Caenorhabditis elegans Hypothetical p...    28   5.9  
Z81054-12|CAB61006.1| 1781|Caenorhabditis elegans Hypothetical p...    27   7.9  
Z81032-6|CAB60991.1| 1781|Caenorhabditis elegans Hypothetical pr...    27   7.9  
AF125459-8|AAD12840.2|  317|Caenorhabditis elegans Serpentine re...    27   7.9  
AF038576-1|AAC38973.1| 1781|Caenorhabditis elegans CED-5 protein.      27   7.9  

>AL132951-5|CAC44307.1|  426|Caenorhabditis elegans Hypothetical
           protein Y67H2A.6 protein.
          Length = 426

 Score = 57.2 bits (132), Expect = 8e-09
 Identities = 26/48 (54%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
 Frame = +2

Query: 380 LHPLVIMNVSEHWTRLKAQEG-FPQTVVGALIGKQKGRNIEVMNSFEL 520
           LHPLVIM +SEH++R K Q+G   + V GA++G+Q GR +E +NSF L
Sbjct: 16  LHPLVIMQMSEHYSRTKVQQGPTVKKVFGAILGRQNGRQVEAINSFVL 63


>U00055-2|AAA50721.1|  223|Caenorhabditis elegans Hypothetical
           protein R02F2.5 protein.
          Length = 223

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 15/30 (50%), Positives = 18/30 (60%)
 Frame = +2

Query: 224 DRIDFEMEVEVESASSGPPIEVPNPTSPAP 313
           D+ + E+E EVE   S P   VP PT PAP
Sbjct: 102 DQTEKEVEKEVEKRKSAPRAPVPAPT-PAP 130


>Z82083-3|CAB04971.1|  756|Caenorhabditis elegans Hypothetical
           protein ZK1010.5 protein.
          Length = 756

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +2

Query: 251 EVESASSGPPIEVPNPTSPAPTTP 322
           E   A   P  EVPNP  P+P +P
Sbjct: 569 ETTDAPEEPATEVPNPQPPSPPSP 592


>U27312-10|AAA68253.1|  231|Caenorhabditis elegans Hypothetical
           protein F26A1.12 protein.
          Length = 231

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +2

Query: 275 PPIEVPNPTSPAPTTPG 325
           PP   P PT+PAP+ PG
Sbjct: 59  PPPATPPPTTPAPSCPG 75


>Z81054-12|CAB61006.1| 1781|Caenorhabditis elegans Hypothetical
            protein C02F4.1 protein.
          Length = 1781

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = +2

Query: 218  SADRIDFEMEVEVESASSGPPIEVPNPTSPAPTTPGSN 331
            S D I  ++   +  +   PP   PNP SP    P SN
Sbjct: 1698 SFDNISSKLRSSLAISKLAPPPRPPNPISPINRGPSSN 1735


>Z81032-6|CAB60991.1| 1781|Caenorhabditis elegans Hypothetical protein
            C02F4.1 protein.
          Length = 1781

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = +2

Query: 218  SADRIDFEMEVEVESASSGPPIEVPNPTSPAPTTPGSN 331
            S D I  ++   +  +   PP   PNP SP    P SN
Sbjct: 1698 SFDNISSKLRSSLAISKLAPPPRPPNPISPINRGPSSN 1735


>AF125459-8|AAD12840.2|  317|Caenorhabditis elegans Serpentine
           receptor, class g (gamma)protein 21 protein.
          Length = 317

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 17/57 (29%), Positives = 28/57 (49%)
 Frame = -1

Query: 181 LKLEDYIMRNKYLYCLDYRNQFVGICNLIFMI*Q*YFPLYTLVIIICRGTVIFNAFH 11
           L + +Y ++N   Y L      +GI   +F   Q YF  +T  +   R  ++F+AFH
Sbjct: 227 LTILEYRIKNVERY-LTIFTLIMGIQTALFAFTQIYFAFFTAYLPGIRSFMLFSAFH 282


>AF038576-1|AAC38973.1| 1781|Caenorhabditis elegans CED-5 protein.
          Length = 1781

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = +2

Query: 218  SADRIDFEMEVEVESASSGPPIEVPNPTSPAPTTPGSN 331
            S D I  ++   +  +   PP   PNP SP    P SN
Sbjct: 1698 SFDNISSKLRSSLAISKLAPPPRPPNPISPINRGPSSN 1735


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,965,201
Number of Sequences: 27780
Number of extensions: 232135
Number of successful extensions: 840
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 777
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 836
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1300523034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)