Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10c08
         (607 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   9.4  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    21   9.4  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            21   9.4  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = -1

Query: 133  DYRNQFVGICNLIFMI*Q*YFPLYTLVIIICRG 35
            D  N FVG  N +F   + +   Y L+   C G
Sbjct: 1604 DSTNDFVGPKNCLFRKPEHFVASYALISNQCEG 1636


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = +2

Query: 179 QFIEFSYPRVKMSS 220
           ++++FSYPR++  S
Sbjct: 105 EYLKFSYPRMRAPS 118


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = +1

Query: 25  KLPYRDK*LSPKCREENIIVKS*ILNCK 108
           ++PY  K   P+C   N    S + NC+
Sbjct: 144 QVPYTVKNFHPRCAVNNYNDPSNVRNCE 171


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,708
Number of Sequences: 438
Number of extensions: 3098
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17848938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)