Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10c06
(545 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z35663-11|CAA84732.2| 791|Caenorhabditis elegans Hypothetical p... 32 0.31
AF039047-3|AAB94222.1| 748|Caenorhabditis elegans Carnitine pal... 32 0.31
Z95559-16|CAB63365.3| 1440|Caenorhabditis elegans Hypothetical p... 30 1.2
Z78060-5|CAB01492.1| 216|Caenorhabditis elegans Hypothetical pr... 29 1.7
U23511-1|AAC46791.1| 859|Caenorhabditis elegans Hypothetical pr... 29 1.7
AL022271-2|CAA18350.1| 216|Caenorhabditis elegans Hypothetical ... 29 1.7
AF000198-2|AAB53055.2| 748|Caenorhabditis elegans Hypothetical ... 29 2.9
Z36719-1|CAA85311.2| 576|Caenorhabditis elegans Hypothetical pr... 28 3.8
U41534-7|AAB47599.3| 1743|Caenorhabditis elegans Hypothetical pr... 28 3.8
U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and en... 28 3.8
L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RET... 28 3.8
L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RET... 28 3.8
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 28 3.8
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 28 3.8
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 28 3.8
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ... 28 3.8
AL033514-7|CAA22114.1| 648|Caenorhabditis elegans Hypothetical ... 28 3.8
U29380-10|AAO38582.1| 454|Caenorhabditis elegans Hypothetical p... 28 5.0
U29380-9|AAA68745.1| 472|Caenorhabditis elegans Hypothetical pr... 28 5.0
AC006742-7|ABB51176.1| 1434|Caenorhabditis elegans Ferm domain (... 28 5.0
AC006742-1|AAF60499.2| 1393|Caenorhabditis elegans Hypothetical ... 28 5.0
Z92813-3|CAB07287.1| 621|Caenorhabditis elegans Hypothetical pr... 27 6.7
Z82278-6|CAB05258.1| 690|Caenorhabditis elegans Hypothetical pr... 27 6.7
U28971-8|AAD31046.2| 767|Caenorhabditis elegans Related to isle... 27 6.7
AJ245560-1|CAB52188.1| 767|Caenorhabditis elegans IDA-1 protein... 27 6.7
AF126740-1|AAK14908.1| 767|Caenorhabditis elegans IA2 protein. 27 6.7
AF067948-4|AAO25983.1| 756|Caenorhabditis elegans Egl-27 relate... 27 6.7
AF067948-3|AAO25984.1| 870|Caenorhabditis elegans Egl-27 relate... 27 6.7
AF067948-2|AAD34654.1| 870|Caenorhabditis elegans Egl-27 relate... 27 6.7
AF067948-1|AAD34653.1| 1022|Caenorhabditis elegans Egl-27 relate... 27 6.7
Z78200-8|CAB01583.2| 368|Caenorhabditis elegans Hypothetical pr... 27 8.8
>Z35663-11|CAA84732.2| 791|Caenorhabditis elegans Hypothetical
protein T04A8.13 protein.
Length = 791
Score = 31.9 bits (69), Expect = 0.31
Identities = 34/153 (22%), Positives = 63/153 (41%), Gaps = 2/153 (1%)
Frame = +3
Query: 90 GEHLDTFKTLNGDFSDTTVRERKSTAQAEL-DHHLNQNVDDGISNGRSLHAKKPIIVKKK 266
G +D + + D D R+R+ Q E + ++ D + +K KK+
Sbjct: 28 GLGMDQKEIVGDDKKDKEARKRERKLQDEFAELKKDEEKDKEEAEKEKNEKEKKEEEKKE 87
Query: 267 IGYHLYRDSDEEKRLTSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTEDID-DHLMSEE 443
G+ D E+K+ EN N++ K K D++ + T TED + + ++
Sbjct: 88 DGHEKKEDKKEDKK-----ENENDEKKEKSKDDKKEESKEDKKEKTKTEDNEGKNEEKKK 142
Query: 444 DMKQSLKMAKEAIANLERDLQKMDTKSSPKSAQ 542
+ K+ K KE E D +K K+ + +
Sbjct: 143 EKKEEKKDEKEKKEKTEDDKEKEKEKTKEEKVK 175
>AF039047-3|AAB94222.1| 748|Caenorhabditis elegans Carnitine
palmitoyl transferaseprotein 4 protein.
Length = 748
Score = 31.9 bits (69), Expect = 0.31
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = +3
Query: 426 HLMSEEDMKQSLKMAKEAIANLERDLQK 509
HLMSEED Q L+M+++ ++N R +Q+
Sbjct: 162 HLMSEEDYDQLLEMSRKFVSNEGRSIQR 189
>Z95559-16|CAB63365.3| 1440|Caenorhabditis elegans Hypothetical
protein Y41E3.9 protein.
Length = 1440
Score = 29.9 bits (64), Expect = 1.2
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Frame = +3
Query: 300 EKRLTSSRE--NCNEKVKV---KLCDEEAALTSTGMGRSTTTEDIDDHLMSEEDMKQSLK 464
EK++ SS N +EK +V K + A + T + +D + E+D ++ K
Sbjct: 1089 EKKMLSSEHLSNDSEKARVEIGKFLAKSAEFSPTPAVAVAILDVFEDLKLDEDDDAETRK 1148
Query: 465 -MAKEAIANLERDLQKMD 515
MAK A+A L++D K+D
Sbjct: 1149 IMAKYALAYLKKDWSKVD 1166
>Z78060-5|CAB01492.1| 216|Caenorhabditis elegans Hypothetical
protein C34D1.5 protein.
Length = 216
Score = 29.5 bits (63), Expect = 1.7
Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
Frame = +3
Query: 294 DEEKRL--TSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTEDIDDHLMSEEDMKQSLKM 467
DE+KRL T + C EK+K K D E LT + L E+ + L+
Sbjct: 111 DEKKRLRNTEAARRCREKIKRKTDDLETELTRLTARNEVMNQHRIRLLSQVEEQMRMLEN 170
Query: 468 AKEAIANLERDLQ 506
K LE +++
Sbjct: 171 IKSRNPELEAEIR 183
>U23511-1|AAC46791.1| 859|Caenorhabditis elegans Hypothetical
protein C32D5.3 protein.
Length = 859
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +3
Query: 369 AALTSTGMGRSTTTEDIDDHLMSEEDMKQSLK 464
+AL ST G +T TE+ L + ED+ +SLK
Sbjct: 645 SALNSTSQGATTITEEDQTLLFNAEDIAESLK 676
>AL022271-2|CAA18350.1| 216|Caenorhabditis elegans Hypothetical
protein C34D1.5 protein.
Length = 216
Score = 29.5 bits (63), Expect = 1.7
Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
Frame = +3
Query: 294 DEEKRL--TSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTEDIDDHLMSEEDMKQSLKM 467
DE+KRL T + C EK+K K D E LT + L E+ + L+
Sbjct: 111 DEKKRLRNTEAARRCREKIKRKTDDLETELTRLTARNEVMNQHRIRLLSQVEEQMRMLEN 170
Query: 468 AKEAIANLERDLQ 506
K LE +++
Sbjct: 171 IKSRNPELEAEIR 183
>AF000198-2|AAB53055.2| 748|Caenorhabditis elegans Hypothetical
protein T28F2.4a protein.
Length = 748
Score = 28.7 bits (61), Expect = 2.9
Identities = 24/97 (24%), Positives = 41/97 (42%), Gaps = 2/97 (2%)
Frame = +3
Query: 192 NQNVDDGISNGRSLHAKKPIIVKKKIGYHLYRDSDEEKRLTSSRENCNEKVKVKLCDEEA 371
N+N ISNGR + KK +V+ + DSDEE + +++ + D E
Sbjct: 142 NENKVTLISNGREIAFKKTEVVESDDEQMIGLDSDEELEDEDETDIDEDEMMIDPKDIER 201
Query: 372 ALTSTGMGRSTTTED--IDDHLMSEEDMKQSLKMAKE 476
+ + ED I+D +E+ + + A E
Sbjct: 202 YINFESVEDEEDMEDEEIEDEEFEDEEFEDEEEEADE 238
>Z36719-1|CAA85311.2| 576|Caenorhabditis elegans Hypothetical
protein C06C3.3 protein.
Length = 576
Score = 28.3 bits (60), Expect = 3.8
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 4/47 (8%)
Frame = +3
Query: 126 DFSDTTV-RER---KSTAQAELDHHLNQNVDDGISNGRSLHAKKPII 254
D +TT+ RE+ KST Q ++D + + +D I N L ++KP I
Sbjct: 425 DQGNTTLKREKSIEKSTRQGKIDKSIEKLIDKSIDNTEKLSSQKPKI 471
>U41534-7|AAB47599.3| 1743|Caenorhabditis elegans Hypothetical
protein C16A3.3 protein.
Length = 1743
Score = 28.3 bits (60), Expect = 3.8
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 363 EEAALTSTGMGRSTTTEDIDDHLMSE 440
E+A +T TG G+ +DDHL+S+
Sbjct: 628 EKANVTFTGEGKKEVYASVDDHLLSD 653
>U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and env
protein precursor protein.
Length = 2272
Score = 28.3 bits (60), Expect = 3.8
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = +3
Query: 417 IDDHLMSEEDMKQSLKMAKEAIANLERDLQKM 512
+DD L++ +DM+Q L+ KEA+ + + K+
Sbjct: 1181 VDDLLIASKDMEQHLQDVKEALTRIRKSGMKL 1212
>L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RETR-1
protein, isoforma protein.
Length = 2175
Score = 28.3 bits (60), Expect = 3.8
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = +3
Query: 417 IDDHLMSEEDMKQSLKMAKEAIANLERDLQKM 512
+DD L++ +DM+Q L+ KEA+ + + K+
Sbjct: 1084 VDDLLIASKDMEQHLQDVKEALTRIRKSGMKL 1115
>L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RETR-1
protein, isoformb protein.
Length = 2186
Score = 28.3 bits (60), Expect = 3.8
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = +3
Query: 417 IDDHLMSEEDMKQSLKMAKEAIANLERDLQKM 512
+DD L++ +DM+Q L+ KEA+ + + K+
Sbjct: 1095 VDDLLIASKDMEQHLQDVKEALTRIRKSGMKL 1126
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 28.3 bits (60), Expect = 3.8
Identities = 21/94 (22%), Positives = 45/94 (47%), Gaps = 5/94 (5%)
Frame = +3
Query: 270 GYHLYRDSDEEKRLTSSRENCNEKVK-VKLCDEEAALTSTGMGRSTTTEDIDD-HLMSEE 443
G ++ +++ +R + + +V+ +K C E L M E ++S++
Sbjct: 1949 GQEIFANTNTVERNSKAGAKAKGEVENLKKCVETLLLFDAEMDMKDIKESSPKKEIISKK 2008
Query: 444 DMKQ---SLKMAKEAIANLERDLQKMDTKSSPKS 536
D + +K+ ++ + ++ERDL KM+ S KS
Sbjct: 2009 DQQSLDDQIKVTQQILKDVERDLNKMERTSPGKS 2042
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 28.3 bits (60), Expect = 3.8
Identities = 21/94 (22%), Positives = 45/94 (47%), Gaps = 5/94 (5%)
Frame = +3
Query: 270 GYHLYRDSDEEKRLTSSRENCNEKVK-VKLCDEEAALTSTGMGRSTTTEDIDD-HLMSEE 443
G ++ +++ +R + + +V+ +K C E L M E ++S++
Sbjct: 1949 GQEIFANTNTVERNSKAGAKAKGEVENLKKCVETLLLFDAEMDMKDIKESSPKKEIISKK 2008
Query: 444 DMKQ---SLKMAKEAIANLERDLQKMDTKSSPKS 536
D + +K+ ++ + ++ERDL KM+ S KS
Sbjct: 2009 DQQSLDDQIKVTQQILKDVERDLNKMERTSPGKS 2042
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 28.3 bits (60), Expect = 3.8
Identities = 21/94 (22%), Positives = 45/94 (47%), Gaps = 5/94 (5%)
Frame = +3
Query: 270 GYHLYRDSDEEKRLTSSRENCNEKVK-VKLCDEEAALTSTGMGRSTTTEDIDD-HLMSEE 443
G ++ +++ +R + + +V+ +K C E L M E ++S++
Sbjct: 1949 GQEIFANTNTVERNSKAGAKAKGEVENLKKCVETLLLFDAEMDMKDIKESSPKKEIISKK 2008
Query: 444 DMKQ---SLKMAKEAIANLERDLQKMDTKSSPKS 536
D + +K+ ++ + ++ERDL KM+ S KS
Sbjct: 2009 DQQSLDDQIKVTQQILKDVERDLNKMERTSPGKS 2042
>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
protein Y46G5A.4 protein.
Length = 2145
Score = 28.3 bits (60), Expect = 3.8
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
Frame = +3
Query: 9 VFHP*AMETLIVLFAVIYTIIA--APAQ---LGEHLDTFKTLNGDFSDTTVRERKS 161
VF P +T V A++ +A AP + L EH DTF+ L D D ++RE S
Sbjct: 1558 VFVPVRRQTRPVAVALLTMALADGAPKRFLRLAEHDDTFQALLADIEDESLRESVS 1613
>AL033514-7|CAA22114.1| 648|Caenorhabditis elegans Hypothetical
protein Y75B8A.7 protein.
Length = 648
Score = 28.3 bits (60), Expect = 3.8
Identities = 9/39 (23%), Positives = 24/39 (61%)
Frame = +3
Query: 411 EDIDDHLMSEEDMKQSLKMAKEAIANLERDLQKMDTKSS 527
E+++D ++ +ED +++ + L+ DL+KM+ + +
Sbjct: 133 EELEDEMIDDEDEADLFNLSESDLKTLDADLKKMEEEEA 171
>U29380-10|AAO38582.1| 454|Caenorhabditis elegans Hypothetical
protein ZK546.14b protein.
Length = 454
Score = 27.9 bits (59), Expect = 5.0
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +3
Query: 438 EEDMKQSLKMAKEAIANLERDLQKMDTKS 524
++D+K+SLKM K ++ N R L K + KS
Sbjct: 16 DDDVKESLKMRKHSLVN--RQLSKKERKS 42
>U29380-9|AAA68745.1| 472|Caenorhabditis elegans Hypothetical
protein ZK546.14a protein.
Length = 472
Score = 27.9 bits (59), Expect = 5.0
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +3
Query: 438 EEDMKQSLKMAKEAIANLERDLQKMDTKS 524
++D+K+SLKM K ++ N R L K + KS
Sbjct: 34 DDDVKESLKMRKHSLVN--RQLSKKERKS 60
>AC006742-7|ABB51176.1| 1434|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 5
protein.
Length = 1434
Score = 27.9 bits (59), Expect = 5.0
Identities = 13/52 (25%), Positives = 30/52 (57%)
Frame = +3
Query: 102 DTFKTLNGDFSDTTVRERKSTAQAELDHHLNQNVDDGISNGRSLHAKKPIIV 257
D F +G+ ++ +RE+K + +L H L+ + ++ + S+H +PI++
Sbjct: 193 DPFDEDSGNSNENQLREKKLHKKEQLAHRLSSSSEEIVE--ASIHEDEPIVM 242
>AC006742-1|AAF60499.2| 1393|Caenorhabditis elegans Hypothetical
protein Y38C1AB.4 protein.
Length = 1393
Score = 27.9 bits (59), Expect = 5.0
Identities = 13/52 (25%), Positives = 30/52 (57%)
Frame = +3
Query: 102 DTFKTLNGDFSDTTVRERKSTAQAELDHHLNQNVDDGISNGRSLHAKKPIIV 257
D F +G+ ++ +RE+K + +L H L+ + ++ + S+H +PI++
Sbjct: 193 DPFDEDSGNSNENQLREKKLHKKEQLAHRLSSSSEEIVE--ASIHEDEPIVM 242
>Z92813-3|CAB07287.1| 621|Caenorhabditis elegans Hypothetical
protein T28A8.3 protein.
Length = 621
Score = 27.5 bits (58), Expect = 6.7
Identities = 25/103 (24%), Positives = 43/103 (41%)
Frame = +3
Query: 117 LNGDFSDTTVRERKSTAQAELDHHLNQNVDDGISNGRSLHAKKPIIVKKKIGYHLYRDSD 296
L GD S + +RK A + DHH N D + +S +K + + D
Sbjct: 248 LEGDHSRSARNKRKYAAYRKTDHHHLSNAKDPKLSRKS--GRKSDLE--------FSDKS 297
Query: 297 EEKRLTSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTEDIDD 425
+E + S+ CN + + C++ A G S E+++D
Sbjct: 298 DEDDVDSAISKCNFPKRAR-CEKSADPELHESGESDDDEEMED 339
>Z82278-6|CAB05258.1| 690|Caenorhabditis elegans Hypothetical
protein M162.7 protein.
Length = 690
Score = 27.5 bits (58), Expect = 6.7
Identities = 13/43 (30%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +3
Query: 420 DDHLMSEEDMKQSLKMAKEAIANLERDLQKMDT-KSSPKSAQM 545
DD + +++KQ + MAK + + D+Q++ T +S+ K +M
Sbjct: 254 DDQFLMNKNLKQVMNMAK-GLKSSREDIQRLQTLRSNTKELEM 295
>U28971-8|AAD31046.2| 767|Caenorhabditis elegans Related to islet
cell diabetesautoantigen protein 1 protein.
Length = 767
Score = 27.5 bits (58), Expect = 6.7
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = +3
Query: 375 LTSTGMGRSTTT--EDIDDHLMSEEDMKQSLKMAKEAIANLERDLQK 509
L TG+ T ED++ +++EDM Q ++ KE E D+++
Sbjct: 126 LIDTGLTEDPTILDEDVNPENVTDEDMAQIIEQLKEPSLPTEEDIEE 172
>AJ245560-1|CAB52188.1| 767|Caenorhabditis elegans IDA-1 protein
protein.
Length = 767
Score = 27.5 bits (58), Expect = 6.7
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = +3
Query: 375 LTSTGMGRSTTT--EDIDDHLMSEEDMKQSLKMAKEAIANLERDLQK 509
L TG+ T ED++ +++EDM Q ++ KE E D+++
Sbjct: 126 LIDTGLTEDPTILDEDVNPENVTDEDMAQIIEQLKEPSLPTEEDIEE 172
>AF126740-1|AAK14908.1| 767|Caenorhabditis elegans IA2 protein.
Length = 767
Score = 27.5 bits (58), Expect = 6.7
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = +3
Query: 375 LTSTGMGRSTTT--EDIDDHLMSEEDMKQSLKMAKEAIANLERDLQK 509
L TG+ T ED++ +++EDM Q ++ KE E D+++
Sbjct: 126 LIDTGLTEDPTILDEDVNPENVTDEDMAQIIEQLKEPSLPTEEDIEE 172
>AF067948-4|AAO25983.1| 756|Caenorhabditis elegans Egl-27 related
protein 1, isoform c protein.
Length = 756
Score = 27.5 bits (58), Expect = 6.7
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Frame = +3
Query: 288 DSDEEKRLTSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTED---IDDHLMSEEDMKQS 458
++ E T +E+ ++ V K+ ++E G GR+++TE+ D + +D K+
Sbjct: 115 EASAETSETKVKEDTDD-VAEKMEEDEECPAPVGQGRTSSTEEPSASDAPAATAKDKKEE 173
Query: 459 LKMAKEAIANLERDLQKMDTK 521
K AKE NL+ + TK
Sbjct: 174 -KEAKENAKNLKETAEAEATK 193
>AF067948-3|AAO25984.1| 870|Caenorhabditis elegans Egl-27 related
protein 1, isoform d protein.
Length = 870
Score = 27.5 bits (58), Expect = 6.7
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Frame = +3
Query: 288 DSDEEKRLTSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTED---IDDHLMSEEDMKQS 458
++ E T +E+ ++ V K+ ++E G GR+++TE+ D + +D K+
Sbjct: 115 EASAETSETKVKEDTDD-VAEKMEEDEECPAPVGQGRTSSTEEPSASDAPAATAKDKKEE 173
Query: 459 LKMAKEAIANLERDLQKMDTK 521
K AKE NL+ + TK
Sbjct: 174 -KEAKENAKNLKETAEAEATK 193
>AF067948-2|AAD34654.1| 870|Caenorhabditis elegans Egl-27 related
protein 1, isoform b protein.
Length = 870
Score = 27.5 bits (58), Expect = 6.7
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Frame = +3
Query: 288 DSDEEKRLTSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTED---IDDHLMSEEDMKQS 458
++ E T +E+ ++ V K+ ++E G GR+++TE+ D + +D K+
Sbjct: 115 EASAETSETKVKEDTDD-VAEKMEEDEECPAPVGQGRTSSTEEPSASDAPAATAKDKKEE 173
Query: 459 LKMAKEAIANLERDLQKMDTK 521
K AKE NL+ + TK
Sbjct: 174 -KEAKENAKNLKETAEAEATK 193
>AF067948-1|AAD34653.1| 1022|Caenorhabditis elegans Egl-27 related
protein 1, isoform a protein.
Length = 1022
Score = 27.5 bits (58), Expect = 6.7
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Frame = +3
Query: 288 DSDEEKRLTSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTED---IDDHLMSEEDMKQS 458
++ E T +E+ ++ V K+ ++E G GR+++TE+ D + +D K+
Sbjct: 115 EASAETSETKVKEDTDD-VAEKMEEDEECPAPVGQGRTSSTEEPSASDAPAATAKDKKEE 173
Query: 459 LKMAKEAIANLERDLQKMDTK 521
K AKE NL+ + TK
Sbjct: 174 -KEAKENAKNLKETAEAEATK 193
>Z78200-8|CAB01583.2| 368|Caenorhabditis elegans Hypothetical
protein T04H1.6 protein.
Length = 368
Score = 27.1 bits (57), Expect = 8.8
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +3
Query: 297 EEKRLTSSRENCNEKVKVKLCDE 365
E++ S ENCN K +K C E
Sbjct: 173 EDQAFDKSTENCNHKNAIKFCPE 195
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,693,410
Number of Sequences: 27780
Number of extensions: 191357
Number of successful extensions: 738
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 737
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1102518352
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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