Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10c06
(545 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g28770.1 68416.m03591 expressed protein 31 0.66
At1g01690.1 68414.m00087 expressed protein 30 0.88
At4g36105.1 68417.m05139 expressed protein 30 1.2
At1g72410.1 68414.m08374 COP1-interacting protein-related simila... 30 1.2
At1g42440.1 68414.m04894 expressed protein contains Pfam domain,... 30 1.2
At5g67100.1 68418.m08460 DNA-directed DNA polymerase alpha catal... 29 1.5
At3g62620.1 68416.m07034 sucrose-phosphatase-related contains we... 29 1.5
At1g20290.1 68414.m02533 hypothetical protein 29 2.0
At2g31250.1 68415.m03816 glutamyl-tRNA reductase, putative simil... 29 2.7
At5g16500.1 68418.m01928 protein kinase family protein contains ... 28 3.5
At3g18610.1 68416.m02365 nucleolin, putative contains Pfam profi... 28 3.5
At2g22720.3 68415.m02692 expressed protein 28 3.5
At2g22720.2 68415.m02691 expressed protein 28 3.5
At2g22720.1 68415.m02693 expressed protein 28 3.5
At1g22260.1 68414.m02782 expressed protein 28 3.5
At5g44900.1 68418.m05505 disease resistance protein (TIR class),... 28 4.7
At1g21640.1 68414.m02709 ATP-NAD kinase family protein contains ... 28 4.7
At5g60030.1 68418.m07527 expressed protein 27 6.2
At5g20610.1 68418.m02448 expressed protein 27 6.2
At1g70810.1 68414.m08168 C2 domain-containing protein similar to... 27 8.2
At1g35660.1 68414.m04432 expressed protein 27 8.2
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 30.7 bits (66), Expect = 0.66
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +3
Query: 387 GMGRSTTTEDIDDHLMSEEDMKQSLKMAKEAIANLERDLQK 509
G G S DI+ +L S+ED+K ++ AK A +++ L++
Sbjct: 337 GQGESIEDSDIEKNLESKEDVKSEVEAAKNAGSSMTGKLEE 377
>At1g01690.1 68414.m00087 expressed protein
Length = 742
Score = 30.3 bits (65), Expect = 0.88
Identities = 16/69 (23%), Positives = 34/69 (49%)
Frame = +3
Query: 147 RERKSTAQAELDHHLNQNVDDGISNGRSLHAKKPIIVKKKIGYHLYRDSDEEKRLTSSRE 326
R+++S + E+D+ N + D + ++LH I++K H R +KRL ++
Sbjct: 389 RKKRSPQEEEVDNENNSSEDSRLMGAKNLHLFLSEIMRKL--KHAIRKEKPDKRLLGKKK 446
Query: 327 NCNEKVKVK 353
+ + + K
Sbjct: 447 SFEKSLSTK 455
>At4g36105.1 68417.m05139 expressed protein
Length = 245
Score = 29.9 bits (64), Expect = 1.2
Identities = 23/88 (26%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
Frame = +3
Query: 303 KRLTSSR-ENCNEKVKVKLCDEEAALTSTGM-GRSTTTEDIDDHLMSE-EDMKQSLKMAK 473
+R+T++ E C+ K KV +C+EE + + S E + +M+E E +K +L +
Sbjct: 109 RRVTAAESETCSHKEKVIICEEEITRKTVQIQNLSLRLEQTERIVMTECESLKNALTASN 168
Query: 474 EAIANL----ERDLQKMDTKSSPKSAQM 545
+ L R Q ++ + KS Q+
Sbjct: 169 NVLDTLLSSSRRHFQTIEARLVAKSTQL 196
>At1g72410.1 68414.m08374 COP1-interacting protein-related similar
to COP1-Interacting ProteinI 7 (CIP7) [Arabidopsis
thaliana] GI:3327870
Length = 1163
Score = 29.9 bits (64), Expect = 1.2
Identities = 31/133 (23%), Positives = 57/133 (42%), Gaps = 1/133 (0%)
Frame = +3
Query: 129 FSDTTVRERKSTAQAELDHHLNQNVDDGISNGRSLHAKKPIIVKKKIGYHLYRDSDEEKR 308
F TV E K A HHL D+ S SL ++P ++ K L + +
Sbjct: 162 FDPHTVSELKQFADRFSAHHL----DEACSKYISLWKQRPDLIDMKYSNQLAGVDNVSLQ 217
Query: 309 LTSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTED-IDDHLMSEEDMKQSLKMAKEAIA 485
S+R+ N + + ++ A TST T+D +D + + + + +++ +
Sbjct: 218 KDSTRQKQNAVNESEHQIQQCATTSTKRNEEEKTDDSLDVTSSTVKTTQHTRRLSVQDRI 277
Query: 486 NLERDLQKMDTKS 524
NL + QK ++ S
Sbjct: 278 NLFENKQKENSPS 290
>At1g42440.1 68414.m04894 expressed protein contains Pfam domain,
PF04950: Protein of unknown function (DUF663)
Length = 793
Score = 29.9 bits (64), Expect = 1.2
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Frame = +3
Query: 288 DSDEEKRLTSSRENCNEK--VKVKLCDEEAALTSTGMGRSTTTED--IDDHLMSEEDMKQ 455
DSD+ + E+ N++ + D+ +L + T E +DD ++EE +K
Sbjct: 407 DSDDNGMVLDRGEDSNQEGMYDQEFEDDGKSLNLRDIDTETQNESEMVDDEDLTEEQIKD 466
Query: 456 SLKMAKEAIANLERDLQKMDT 518
+K KEA A+ E +++T
Sbjct: 467 EIKKIKEAYADDEEFPDEVET 487
>At5g67100.1 68418.m08460 DNA-directed DNA polymerase alpha
catalytic subunit, putative similar to SP|O48653 DNA
polymerase alpha catalytic subunit (EC 2.7.7.7) {Oryza
sativa}; contains Pfam profiles: PF03175 DNA polymerase
type B, organellar and viral, PF00136 DNA polymerase
family B, PF03104 DNA polymerase family B, exonuclease
domain
Length = 1492
Score = 29.5 bits (63), Expect = 1.5
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +3
Query: 417 IDDHLMSEEDMKQSLKMAKEAIANLERDLQKMDTKSSPKSAQM 545
+D+ LM EEDMK+S + E + L D+ K D + + ++
Sbjct: 239 MDNELMKEEDMKESEVIPSETMELLGSDIVKEDGSNKIRKTEV 281
>At3g62620.1 68416.m07034 sucrose-phosphatase-related contains weak
similarity to sucrose-phosphatase [Arabidopsis thaliana]
gi|11127757|gb|AAG31075
Length = 358
Score = 29.5 bits (63), Expect = 1.5
Identities = 17/69 (24%), Positives = 36/69 (52%)
Frame = +3
Query: 288 DSDEEKRLTSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTEDIDDHLMSEEDMKQSLKM 467
DS E+ ++ +N ++ L EEA+ GM ++ ED+D L+ + + + L++
Sbjct: 281 DSILEELNDATVDNSQWTAEIVLEAEEASKNQMGMRITSCLEDLDKQLLMQRILGKDLEV 340
Query: 468 AKEAIANLE 494
++ +LE
Sbjct: 341 LLHSVMHLE 349
>At1g20290.1 68414.m02533 hypothetical protein
Length = 382
Score = 29.1 bits (62), Expect = 2.0
Identities = 38/111 (34%), Positives = 50/111 (45%), Gaps = 3/111 (2%)
Frame = +3
Query: 93 EHLDTFKTLNGDFSDTTVRERKSTAQAELDHHLNQ-NVDDGISNGRSLHAKKPIIVKKKI 269
EH D FK + +S E K A A H LNQ N D SN + +IV KKI
Sbjct: 95 EH-DQFKWKHV-YSHIGSAEEKDGAVAIWLHSLNQRNYPDLRSNECK---RNEVIVYKKI 149
Query: 270 GYHLYRDSDEEKRLTSSRENCNEKVKVKLCDEEAALTSTG--MGRSTTTED 416
G + EEK + +EN N ++ + D+ TS G M TT E+
Sbjct: 150 GEASEENIHEEK--ITVKENTNGNAELFVVDKVNDETSEGTIMEERTTLEE 198
>At2g31250.1 68415.m03816 glutamyl-tRNA reductase, putative similar
to HEMA2 [SP|P49294], HEMA1 [SP|P42804]
Length = 524
Score = 28.7 bits (61), Expect = 2.7
Identities = 31/131 (23%), Positives = 58/131 (44%), Gaps = 14/131 (10%)
Frame = +3
Query: 54 VIYTIIAA--PAQLGEHLDTFKTLNGDFS----DTTVRERKSTAQAELDHHLNQNVDD-- 209
VI+T ++ P L EH++ D++ D +V + AELD NVDD
Sbjct: 329 VIFTSTSSETPLFLKEHVEILPPCPADYARLFVDISVPRNVGSCVAELDSARVYNVDDLK 388
Query: 210 -GISNGRSLHAKK-----PIIVKKKIGYHLYRDSDEEKRLTSSRENCNEKVKVKLCDEEA 371
++ + A+K PII ++ I + +RDS + + E+++ + ++
Sbjct: 389 EVVAANKEDRARKSMEALPIIREETIEFEGWRDSLQTFPTIRKLRSKTERIRAECVEKLI 448
Query: 372 ALTSTGMGRST 404
+ GM + T
Sbjct: 449 SKHGNGMDKKT 459
>At5g16500.1 68418.m01928 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 636
Score = 28.3 bits (60), Expect = 3.5
Identities = 22/83 (26%), Positives = 41/83 (49%)
Frame = +3
Query: 288 DSDEEKRLTSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTEDIDDHLMSEEDMKQSLKM 467
DSD+E S ++ E+ +++ E ++ +S + ID+ QSLK+
Sbjct: 437 DSDDESDSNSEKDQEEEQSQLEKARESSSSSSDS---GSERRSIDE----TNATAQSLKI 489
Query: 468 AKEAIANLERDLQKMDTKSSPKS 536
+ ++ E D +K+ +KSS KS
Sbjct: 490 SYSNYSSEEEDNEKLSSKSSCKS 512
>At3g18610.1 68416.m02365 nucleolin, putative contains Pfam profile:
PF00076 RNA recognition motif
Length = 636
Score = 28.3 bits (60), Expect = 3.5
Identities = 28/146 (19%), Positives = 60/146 (41%), Gaps = 1/146 (0%)
Frame = +3
Query: 102 DTFKTLNGDFSDTTVRERKSTAQAELDHHLNQNVDDGISNGRSLHAKKPIIVKKKIGYHL 281
D+ + D V+++ +T + + + ++ S+ AKKP +VK
Sbjct: 236 DSSDESSSDEETPVVKKKPTTVVKDAKAESSSSEEESSSDDEPTPAKKPTVVKN--AKPA 293
Query: 282 YRDSDEEKRLTSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTEDIDDHLMSEEDMKQSL 461
+DS + + E+ +EK K + + T S++ E D+ +E+ K
Sbjct: 294 AKDSSSSEEDSDEEESDDEKPPTK---KAKVSSKTSKQESSSDESSDE--SDKEESKDEK 348
Query: 462 KMAKEAIANLER-DLQKMDTKSSPKS 536
K+ +++E D ++ PK+
Sbjct: 349 VTPKKKDSDVEMVDAEQKSNAKQPKT 374
>At2g22720.3 68415.m02692 expressed protein
Length = 569
Score = 28.3 bits (60), Expect = 3.5
Identities = 12/50 (24%), Positives = 23/50 (46%)
Frame = +3
Query: 120 NGDFSDTTVRERKSTAQAELDHHLNQNVDDGISNGRSLHAKKPIIVKKKI 269
NG + + R + A+ +DH + +G+ GRS +P+ K +
Sbjct: 356 NGQLNSRSDSRRSAPAKVPVDHRKQMSSSNGVGPGRSATNARPLPSKSSL 405
>At2g22720.2 68415.m02691 expressed protein
Length = 672
Score = 28.3 bits (60), Expect = 3.5
Identities = 12/50 (24%), Positives = 23/50 (46%)
Frame = +3
Query: 120 NGDFSDTTVRERKSTAQAELDHHLNQNVDDGISNGRSLHAKKPIIVKKKI 269
NG + + R + A+ +DH + +G+ GRS +P+ K +
Sbjct: 459 NGQLNSRSDSRRSAPAKVPVDHRKQMSSSNGVGPGRSATNARPLPSKSSL 508
>At2g22720.1 68415.m02693 expressed protein
Length = 340
Score = 28.3 bits (60), Expect = 3.5
Identities = 12/50 (24%), Positives = 23/50 (46%)
Frame = +3
Query: 120 NGDFSDTTVRERKSTAQAELDHHLNQNVDDGISNGRSLHAKKPIIVKKKI 269
NG + + R + A+ +DH + +G+ GRS +P+ K +
Sbjct: 127 NGQLNSRSDSRRSAPAKVPVDHRKQMSSSNGVGPGRSATNARPLPSKSSL 176
>At1g22260.1 68414.m02782 expressed protein
Length = 857
Score = 28.3 bits (60), Expect = 3.5
Identities = 17/78 (21%), Positives = 39/78 (50%)
Frame = +3
Query: 279 LYRDSDEEKRLTSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTEDIDDHLMSEEDMKQS 458
L+R + ++ L S+ NEK+ D+E+ ++ R +T++ ID + +
Sbjct: 347 LFRVAATKEALESAGNELNEKIVELQNDKESLISQLSGLRCSTSQTIDKLESEAKGLVSK 406
Query: 459 LKMAKEAIANLERDLQKM 512
A+ AI+ L+ +++ +
Sbjct: 407 HADAESAISQLKEEMETL 424
>At5g44900.1 68418.m05505 disease resistance protein (TIR class),
putative domain signature TIR exists, suggestive of a
disease resistance protein.
Length = 274
Score = 27.9 bits (59), Expect = 4.7
Identities = 21/83 (25%), Positives = 38/83 (45%)
Frame = +3
Query: 171 AELDHHLNQNVDDGISNGRSLHAKKPIIVKKKIGYHLYRDSDEEKRLTSSRENCNEKVKV 350
A L ++N +DD GR L I + ++ ++ K T+SR +E K+
Sbjct: 40 ALLKENVNVFIDDHELRGRDLDHLFSRIEESRVALTIF-----SKNFTNSRWCLDELAKI 94
Query: 351 KLCDEEAALTSTGMGRSTTTEDI 419
K C ++ +LT + T+D+
Sbjct: 95 KECVDQESLTVIPIFFKMKTDDV 117
>At1g21640.1 68414.m02709 ATP-NAD kinase family protein contains
similarity to NAD kinase [Homo sapiens]
gi|20070086|gb|AAM01195; contains Pfam domain, PF01513:
ATP-NAD kinase
Length = 985
Score = 27.9 bits (59), Expect = 4.7
Identities = 15/61 (24%), Positives = 29/61 (47%)
Frame = +3
Query: 243 KPIIVKKKIGYHLYRDSDEEKRLTSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTEDID 422
K +++ KK+G L ++ E +EN N V+ ++ D A + G ++ +D
Sbjct: 678 KTVLLLKKLGQELMEEAKEAASFLYHQENMNVLVEPEVHDVFARIPGFGFVQTFYIQDTS 737
Query: 423 D 425
D
Sbjct: 738 D 738
>At5g60030.1 68418.m07527 expressed protein
Length = 292
Score = 27.5 bits (58), Expect = 6.2
Identities = 20/85 (23%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Frame = +3
Query: 285 RDSDEEKRLTSSRENC-NEKVKVKLCDEEAALTSTGMGRSTTTEDIDDHLMSE-EDMKQS 458
R +++K+ + E+ +EKVK KL DE+ + + + ++ D+ ++ E E ++
Sbjct: 149 RKKEKKKKKNNKDEDVVDEKVKEKLEDEQKSADRKERKKKKSKKNNDEDVVDEKEKLEDE 208
Query: 459 LKMAKEAIANLERDLQKMDTKSSPK 533
K A+ +D +D K K
Sbjct: 209 QKSAEIKEKKKNKDEDVVDEKEKEK 233
>At5g20610.1 68418.m02448 expressed protein
Length = 1164
Score = 27.5 bits (58), Expect = 6.2
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +3
Query: 360 DEEAALTSTGMGRSTTTEDIDDHLMSEEDMKQSLKMAKEAIANLERDL 503
D E+AL S M +T +ED +D + K + KE + + RD+
Sbjct: 503 DLESALKSVEMLEATASEDEEDRKKHGDKDKYFITPMKETVPSCSRDV 550
>At1g70810.1 68414.m08168 C2 domain-containing protein similar to
zinc finger and C2 domain protein GI:9957238 from
[Arabidopsis thaliana]
Length = 165
Score = 27.1 bits (57), Expect = 8.2
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +3
Query: 243 KPIIVKKKIGYHLYRDSDEEKRLTSSRENC 332
KP + K+G D E KR+ +RENC
Sbjct: 91 KPFLEVHKMGLQELPDGTEIKRVVPNRENC 120
>At1g35660.1 68414.m04432 expressed protein
Length = 1155
Score = 27.1 bits (57), Expect = 8.2
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 6/89 (6%)
Frame = +3
Query: 279 LYRDSDEEKRLTSSRENCNEKVKVKLCDEEA--ALTSTGMGRSTTT--ED--IDDHLMSE 440
L +SDEE LT +VK+ +EEA +T T T ED +DH +S
Sbjct: 385 LILNSDEESDLTFESNGVQREVKITDLEEEALDPVTIADHENETVTFSEDKFTEDHSVSN 444
Query: 441 EDMKQSLKMAKEAIANLERDLQKMDTKSS 527
S++ EA +L ++L D+ S
Sbjct: 445 IVPLVSVRPKLEANVSLCKELLHSDSPDS 473
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,922,443
Number of Sequences: 28952
Number of extensions: 172140
Number of successful extensions: 673
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 649
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 671
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1023490624
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -