Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10c04
         (634 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ000675-1|CAA04232.1|  600|Anopheles gambiae infection responsi...    25   2.6  
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    23   6.1  
EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calc...    23   8.1  

>AJ000675-1|CAA04232.1|  600|Anopheles gambiae infection responsive
           serine proteaselike protein protein.
          Length = 600

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = +1

Query: 373 SGVHQINILDEE-GWASLRRARRADPAASVAPLLAIQLSHPGSY 501
           S  H++ I  E+ G  S+ +  R  P+A +  +  ++L+HP  Y
Sbjct: 399 SSTHEMAIPREDIGVKSVHQHPRYSPSALLNNIAVLELAHPVQY 442


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = +1

Query: 262 PENYGLYAEVDGKSLTAARIGENKYQISWTEE 357
           PEN G +A    K++    +GE   Q  W  E
Sbjct: 53  PENNGRWAFSSCKAVAVVAVGELPIQRVWCSE 84


>EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calcium
           channel beta subunitprotein.
          Length = 466

 Score = 23.0 bits (47), Expect = 8.1
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = -2

Query: 498 AARMTKLYGE*WSNRGGRIGTSSTTQRSPA 409
           AAR +KLY    S+  G +G S      P+
Sbjct: 158 AARSSKLYTSKGSSSSGNLGASGVPGAEPS 187


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 587,330
Number of Sequences: 2352
Number of extensions: 11049
Number of successful extensions: 13
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61886940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)