Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10c03
         (643 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    21   6.5  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   6.5  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   6.5  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   6.5  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   8.6  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    21   8.6  

>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -3

Query: 299 RFRSIHLWFV 270
           RFR++ LWFV
Sbjct: 354 RFRALKLWFV 363


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +3

Query: 186 DISAPKGRGRGWQMNNQA 239
           +I AP   G GWQ    A
Sbjct: 303 EIDAPSHAGNGWQWGPDA 320


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -3

Query: 245  LACLVVHLPPP 213
            L CL V LPPP
Sbjct: 1326 LPCLAVGLPPP 1336


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +1

Query: 448  IWMTCLIHLKKLKTWIYG 501
            IW+  LIH KK+  ++ G
Sbjct: 1172 IWICSLIHRKKIVKFLDG 1189


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 11/44 (25%), Positives = 18/44 (40%)
 Frame = +3

Query: 420 RQAQDQNPYNLDDMSYSLEEAENMDLRENIANLITVMCEITFDP 551
           R ++ Q+ + +      L   +N  LRE +    T  C    DP
Sbjct: 10  RASKGQDKHMVHWFRRGLRLHDNPSLREGLKGARTFRCVFVLDP 53


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +1

Query: 280 RWILLNRSYQQMLKNGTLQITLLKRYPLTTLNL 378
           +W LLN ++QQ+ K    +   +K Y    L L
Sbjct: 103 KWRLLNNNFQQIDKIFKTRDDRVKVYQAPVLQL 135


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,575
Number of Sequences: 336
Number of extensions: 3794
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16448590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)