Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10c01
         (717 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0603 + 26539104-26539148,26539941-26540046,26540465-265406...   206   1e-53
06_03_1374 - 29671511-29672252,29672452-29672558,29672904-29673245     73   2e-13
04_01_0100 + 1034057-1034308,1034962-1035078,1035152-1035382,103...    51   8e-07
04_04_0192 - 23471346-23471572,23473004-23473195,23474342-234744...    29   4.9  
05_07_0219 - 28474661-28475146,28475979-28476644                       28   6.4  

>04_04_0603 +
           26539104-26539148,26539941-26540046,26540465-26540603,
           26540837-26540945,26541030-26541166,26541610-26541746,
           26542184-26542290,26542483-26542610,26543418-26543469
          Length = 319

 Score =  206 bits (503), Expect = 1e-53
 Identities = 97/166 (58%), Positives = 125/166 (75%)
 Frame = +1

Query: 82  MNYENKIILAPMVRIGTLPMRLLALKYGADIVYTEELIDWKFLRSKRRFNDILNTVDYVD 261
           M Y +K++LAPMVR+GTLP RLLA +YGADI Y EE+ID KFL+ +R  N+ L T D+++
Sbjct: 1   MEYRDKLVLAPMVRVGTLPFRLLAAEYGADITYGEEIIDHKFLKCERVTNESLGTTDFLE 60

Query: 262 QTDGTIVFRTCEEEKKKVVLQLGTCDEARALKVAKLVEHDVAAIDINMGCPKEFSIKGGM 441
           +   T+VFRTC +E+ +VV Q+GT D  RALK A+LV +DVAAIDINMGCPK FS+ GGM
Sbjct: 61  RGTDTVVFRTCPQERDRVVFQMGTSDAVRALKAAQLVCNDVAAIDINMGCPKSFSLSGGM 120

Query: 442 GVALLSKPDKAYQILKTLVDNLSIPVTCKIRILKTPEATLELVNKL 579
           G ALLSKP+  + IL TL  NL   VTCKIR+L T + T+EL  ++
Sbjct: 121 GAALLSKPELIHDILTTLRRNLDTTVTCKIRLLNTRQDTVELARRV 166


>06_03_1374 - 29671511-29672252,29672452-29672558,29672904-29673245
          Length = 396

 Score = 73.3 bits (172), Expect = 2e-13
 Identities = 52/161 (32%), Positives = 78/161 (48%)
 Frame = +1

Query: 97  KIILAPMVRIGTLPMRLLALKYGADIVYTEELIDWKFLRSKRRFNDILNTVDYVDQTDGT 276
           K+++APMV    LP R+L  +YGA   YT  L         R F++        ++    
Sbjct: 63  KMVVAPMVDNSELPFRMLCRRYGATGAYTPML-------HSRIFSE--------NEKHRA 107

Query: 277 IVFRTCEEEKKKVVLQLGTCDEARALKVAKLVEHDVAAIDINMGCPKEFSIKGGMGVALL 456
           + F TC+E++   V Q    D    L+ AK+VE     +DIN GCP+  + +G  G  L+
Sbjct: 108 MEFTTCKEDRPLFV-QFCANDPDILLQAAKIVEPYCDYVDINFGCPQRIARRGYYGAFLM 166

Query: 457 SKPDKAYQILKTLVDNLSIPVTCKIRILKTPEATLELVNKL 579
           +       +++ L  NL +PV+CKIRI    E TL     L
Sbjct: 167 NNLPLVKSLVQNLSANLHVPVSCKIRIFPRLEDTLAYAKML 207


>04_01_0100 +
           1034057-1034308,1034962-1035078,1035152-1035382,
           1038200-1038455,1038551-1038807,1038978-1039250,
           1039617-1039898,1040045-1040165,1040351-1040520,
           1040613-1040711
          Length = 685

 Score = 51.2 bits (117), Expect = 8e-07
 Identities = 41/153 (26%), Positives = 72/153 (47%), Gaps = 2/153 (1%)
 Frame = +1

Query: 82  MNYENKIILAPMVRIGTLPMRLLALKYGADIVYTEELIDWKFLRSKRRFNDILNTVDYVD 261
           +++  K+ LAP+  +G LP R L    GADI   E  +    L+ +              
Sbjct: 328 IDFREKLYLAPLTTVGNLPFRRLCKTLGADITCGEMAMCTNLLQGQA------------- 374

Query: 262 QTDGTIVFRTCEEEKKKVVLQLGTCDEARALKVAKLVEHDVAA--IDINMGCPKEFSIKG 435
            ++  ++ R   E+   V +  G   +  A +  +LV+++ +   IDINMGCP +  +  
Sbjct: 375 -SEWALLRRHSSEDLFGVQI-CGAYPDTVA-RTVELVDNECSVDFIDINMGCPIDIVVNK 431

Query: 436 GMGVALLSKPDKAYQILKTLVDNLSIPVTCKIR 534
           G G +LL+KP +   I++        P+T K+R
Sbjct: 432 GAGSSLLTKPMRIKSIVQAASTVTEKPLTVKVR 464


>04_04_0192 -
           23471346-23471572,23473004-23473195,23474342-23474418,
           23475810-23475850,23475928-23475974,23476108-23476194,
           23476807-23477011,23477747-23477866
          Length = 331

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 14/49 (28%), Positives = 23/49 (46%)
 Frame = +1

Query: 145 LLALKYGADIVYTEELIDWKFLRSKRRFNDILNTVDYVDQTDGTIVFRT 291
           +LA KY    + T  ++ W F  S R    + N    ++  +GT+V  T
Sbjct: 142 VLAWKYSHAYILTNRILPWAFYASLRFLMKLNNETVTIELKNGTVVHGT 190


>05_07_0219 - 28474661-28475146,28475979-28476644
          Length = 383

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 16/49 (32%), Positives = 23/49 (46%)
 Frame = -2

Query: 470 LSGFDNSATPMPPFIENSFGHPILISIAATSCSTNLATFKALASSHVPS 324
           +  FD +  P PP +  +  HP   S A +S  T  AT  A  +S  P+
Sbjct: 67  VESFDTAPPPSPPPLSATTPHPPPPSPATSSSRTATATATATPTSPTPT 115


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,636,164
Number of Sequences: 37544
Number of extensions: 330716
Number of successful extensions: 726
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 706
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 726
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1862792824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)