Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10c01
(717 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC006527-1|AAH06527.1| 493|Homo sapiens dihydrouridine synthase... 217 2e-56
AK000406-1|BAA91143.1| 493|Homo sapiens protein ( Homo sapiens ... 217 2e-56
AB101210-1|BAE07219.1| 493|Homo sapiens up-regulated in lung ca... 217 2e-56
BC064918-1|AAH64918.1| 473|Homo sapiens dihydrouridine synthase... 62 2e-09
BC062566-1|AAH62566.1| 473|Homo sapiens DUS1L protein protein. 62 2e-09
U62767-1|AAD00100.1| 307|Homo sapiens PP35 protein. 60 6e-09
BC009973-1|AAH09973.1| 650|Homo sapiens dihydrouridine synthase... 53 9e-07
BC008362-1|AAH08362.1| 613|Homo sapiens DUS3L protein protein. 53 9e-07
BC004549-1|AAH04549.1| 408|Homo sapiens DUS3L protein protein. 53 9e-07
AL365411-1|CAB96955.1| 465|Homo sapiens hypothetical protein, s... 53 9e-07
AK023958-1|BAB14740.1| 650|Homo sapiens protein ( Homo sapiens ... 53 9e-07
BC017081-1|AAH17081.4| 406|Homo sapiens DUS1L protein protein. 52 2e-06
AF091072-1|AAC72941.1| 223|Homo sapiens unknown protein. 46 2e-04
AC005757-1|AAC62258.1| 540|Homo sapiens R32611_1 protein. 34 0.44
>BC006527-1|AAH06527.1| 493|Homo sapiens dihydrouridine synthase
2-like, SMM1 homolog (S. cerevisiae) protein.
Length = 493
Score = 217 bits (531), Expect = 2e-56
Identities = 106/168 (63%), Positives = 130/168 (77%)
Frame = +1
Query: 76 INMNYENKIILAPMVRIGTLPMRLLALKYGADIVYTEELIDWKFLRSKRRFNDILNTVDY 255
+++ Y NK+ILAPMVR+GTLPMRLLAL YGADIVY EELID K ++ KR N++L+TVD+
Sbjct: 6 LSLCYHNKLILAPMVRVGTLPMRLLALDYGADIVYCEELIDLKMIQCKRVVNEVLSTVDF 65
Query: 256 VDQTDGTIVFRTCEEEKKKVVLQLGTCDEARALKVAKLVEHDVAAIDINMGCPKEFSIKG 435
V D +VFRTCE E+ +VV Q+GT D RAL VA+LVE+DVA ID+NMGCPK++S KG
Sbjct: 66 V-APDDRVVFRTCEREQNRVVFQMGTSDAERALAVARLVENDVAGIDVNMGCPKQYSTKG 124
Query: 436 GMGVALLSKPDKAYQILKTLVDNLSIPVTCKIRILKTPEATLELVNKL 579
GMG ALLS PDK +IL TLV PVTCKIRIL + E TL LV ++
Sbjct: 125 GMGAALLSDPDKIEKILSTLVKGTRRPVTCKIRILPSLEDTLSLVKRI 172
>AK000406-1|BAA91143.1| 493|Homo sapiens protein ( Homo sapiens
cDNA FLJ20399 fis, clone KAT00581. ).
Length = 493
Score = 217 bits (531), Expect = 2e-56
Identities = 106/168 (63%), Positives = 130/168 (77%)
Frame = +1
Query: 76 INMNYENKIILAPMVRIGTLPMRLLALKYGADIVYTEELIDWKFLRSKRRFNDILNTVDY 255
+++ Y NK+ILAPMVR+GTLPMRLLAL YGADIVY EELID K ++ KR N++L+TVD+
Sbjct: 6 LSLCYHNKLILAPMVRVGTLPMRLLALDYGADIVYCEELIDLKMIQCKRVVNEVLSTVDF 65
Query: 256 VDQTDGTIVFRTCEEEKKKVVLQLGTCDEARALKVAKLVEHDVAAIDINMGCPKEFSIKG 435
V D +VFRTCE E+ +VV Q+GT D RAL VA+LVE+DVA ID+NMGCPK++S KG
Sbjct: 66 V-APDDRVVFRTCEREQNRVVFQMGTSDAERALAVARLVENDVAGIDVNMGCPKQYSTKG 124
Query: 436 GMGVALLSKPDKAYQILKTLVDNLSIPVTCKIRILKTPEATLELVNKL 579
GMG ALLS PDK +IL TLV PVTCKIRIL + E TL LV ++
Sbjct: 125 GMGAALLSDPDKIEKILSTLVKGTRRPVTCKIRILPSLEDTLSLVKRI 172
>AB101210-1|BAE07219.1| 493|Homo sapiens up-regulated in lung
cancer 8 protein.
Length = 493
Score = 217 bits (531), Expect = 2e-56
Identities = 106/168 (63%), Positives = 130/168 (77%)
Frame = +1
Query: 76 INMNYENKIILAPMVRIGTLPMRLLALKYGADIVYTEELIDWKFLRSKRRFNDILNTVDY 255
+++ Y NK+ILAPMVR+GTLPMRLLAL YGADIVY EELID K ++ KR N++L+TVD+
Sbjct: 6 LSLCYHNKLILAPMVRVGTLPMRLLALDYGADIVYCEELIDLKMIQCKRVVNEVLSTVDF 65
Query: 256 VDQTDGTIVFRTCEEEKKKVVLQLGTCDEARALKVAKLVEHDVAAIDINMGCPKEFSIKG 435
V D +VFRTCE E+ +VV Q+GT D RAL VA+LVE+DVA ID+NMGCPK++S KG
Sbjct: 66 V-APDDRVVFRTCEREQNRVVFQMGTSDAERALAVARLVENDVAGIDVNMGCPKQYSTKG 124
Query: 436 GMGVALLSKPDKAYQILKTLVDNLSIPVTCKIRILKTPEATLELVNKL 579
GMG ALLS PDK +IL TLV PVTCKIRIL + E TL LV ++
Sbjct: 125 GMGAALLSDPDKIEKILSTLVKGTRRPVTCKIRILPSLEDTLSLVKRI 172
>BC064918-1|AAH64918.1| 473|Homo sapiens dihydrouridine synthase
1-like (S. cerevisiae) protein.
Length = 473
Score = 62.1 bits (144), Expect = 2e-09
Identities = 44/159 (27%), Positives = 76/159 (47%)
Frame = +1
Query: 103 ILAPMVRIGTLPMRLLALKYGADIVYTEELIDWKFLRSKRRFNDILNTVDYVDQTDGTIV 282
++APMV L RLL+ ++GA + YT L F+R +Y + +
Sbjct: 20 VVAPMVDQSELAWRLLSRRHGAQLCYTPMLHAQVFVRD----------ANYRKE---NLY 66
Query: 283 FRTCEEEKKKVVLQLGTCDEARALKVAKLVEHDVAAIDINMGCPKEFSIKGGMGVALLSK 462
C E+ + +++Q D ++ A L + AID+N+GCP+ + +G G L +
Sbjct: 67 CEVCPED-RPLIVQFCANDPEVFVQAALLAQDYCDAIDLNLGCPQMIAKRGHYGAFLQDE 125
Query: 463 PDKAYQILKTLVDNLSIPVTCKIRILKTPEATLELVNKL 579
D +++ + LS+PVTCKIR+ + T+ L
Sbjct: 126 WDLLQRMILLAHEKLSVPVTCKIRVFPEIDKTVRYAQML 164
>BC062566-1|AAH62566.1| 473|Homo sapiens DUS1L protein protein.
Length = 473
Score = 62.1 bits (144), Expect = 2e-09
Identities = 44/159 (27%), Positives = 76/159 (47%)
Frame = +1
Query: 103 ILAPMVRIGTLPMRLLALKYGADIVYTEELIDWKFLRSKRRFNDILNTVDYVDQTDGTIV 282
++APMV L RLL+ ++GA + YT L F+R +Y + +
Sbjct: 20 VVAPMVDQSELAWRLLSRRHGAQLCYTPMLHAQVFVRD----------ANYRKE---NLY 66
Query: 283 FRTCEEEKKKVVLQLGTCDEARALKVAKLVEHDVAAIDINMGCPKEFSIKGGMGVALLSK 462
C E+ + +++Q D ++ A L + AID+N+GCP+ + +G G L +
Sbjct: 67 CEVCPED-RPLIVQFCANDPEVFVQAALLAQDYCDAIDLNLGCPQMIAKRGHYGAFLQDE 125
Query: 463 PDKAYQILKTLVDNLSIPVTCKIRILKTPEATLELVNKL 579
D +++ + LS+PVTCKIR+ + T+ L
Sbjct: 126 WDLLQRMILLAHEKLSVPVTCKIRVFPEIDKTVRYAQML 164
>U62767-1|AAD00100.1| 307|Homo sapiens PP35 protein.
Length = 307
Score = 60.5 bits (140), Expect = 6e-09
Identities = 48/173 (27%), Positives = 81/173 (46%), Gaps = 5/173 (2%)
Frame = +1
Query: 73 PINMNYENKII--LAPMVRIGTLPMRLLALKYGADIVYTEELIDWKFLRSKRRFNDILNT 246
PI M + +++ APMVR L R L KY D+ YT ++ F++S + + T
Sbjct: 8 PIEMFHSGQLVKVCAPMVRYSKLAFRTLVRKYSCDLCYTPMIVAADFVKSIKARDSEFTT 67
Query: 247 VDYVDQTDGTIVFRTCEEEKKKVVLQLGTCDEARALKVAKLVEHDVAAIDINMGCPKEFS 426
+Q D C +++Q D A++V IDIN GCP+ ++
Sbjct: 68 ----NQGD-------CP-----LIVQFAANDARLLSDAARIVCPYANGIDINCGCPQRWA 111
Query: 427 IKGGMGVALLSKPDKAYQILKTLVDNLSIP---VTCKIRILKTPEATLELVNK 576
+ G G L++KP+ ++K + + + P V+ KIRI + T++L K
Sbjct: 112 MAEGYGACLINKPELVQDMVKQVRNQVETPGFSVSIKIRINDDLKRTVDLCQK 164
>BC009973-1|AAH09973.1| 650|Homo sapiens dihydrouridine synthase
3-like (S. cerevisiae) protein.
Length = 650
Score = 53.2 bits (122), Expect = 9e-07
Identities = 42/153 (27%), Positives = 69/153 (45%), Gaps = 2/153 (1%)
Frame = +1
Query: 82 MNYENKIILAPMVRIGTLPMRLLALKYGADIVYTEELIDWKFLRSKRRFNDILNTVDYVD 261
++ K+ LAP+ G LP R + ++GAD+ E + L+ + +L
Sbjct: 301 LDIRGKLYLAPLTTCGNLPFRRICKRFGADVTCGEMAVCTNLLQGQMSEWALLKR----- 355
Query: 262 QTDGTIVFRTCEEEKKKVVLQLGTCDEARALKVAKLVEHDVAA--IDINMGCPKEFSIKG 435
CE+ +QL K A+L+ V +DIN+GCP + K
Sbjct: 356 --------HQCEDI---FGVQLEGAFPDTMTKCAELLSRTVEVDFVDINVGCPIDLVYKK 404
Query: 436 GMGVALLSKPDKAYQILKTLVDNLSIPVTCKIR 534
G G AL+++ K QI++ + L +P+T KIR
Sbjct: 405 GGGCALMNRSTKFQQIVRGMNQVLDVPLTVKIR 437
>BC008362-1|AAH08362.1| 613|Homo sapiens DUS3L protein protein.
Length = 613
Score = 53.2 bits (122), Expect = 9e-07
Identities = 42/153 (27%), Positives = 69/153 (45%), Gaps = 2/153 (1%)
Frame = +1
Query: 82 MNYENKIILAPMVRIGTLPMRLLALKYGADIVYTEELIDWKFLRSKRRFNDILNTVDYVD 261
++ K+ LAP+ G LP R + ++GAD+ E + L+ + +L
Sbjct: 264 LDIRGKLYLAPLTTCGNLPFRRICKRFGADVTCGEMAVCTNLLQGQMSEWALLKR----- 318
Query: 262 QTDGTIVFRTCEEEKKKVVLQLGTCDEARALKVAKLVEHDVAA--IDINMGCPKEFSIKG 435
CE+ +QL K A+L+ V +DIN+GCP + K
Sbjct: 319 --------HQCEDI---FGVQLEGAFPDTMTKCAELLSRTVEVDFVDINVGCPIDLVYKK 367
Query: 436 GMGVALLSKPDKAYQILKTLVDNLSIPVTCKIR 534
G G AL+++ K QI++ + L +P+T KIR
Sbjct: 368 GGGCALMNRSTKFQQIVRGMNQVLDVPLTVKIR 400
>BC004549-1|AAH04549.1| 408|Homo sapiens DUS3L protein protein.
Length = 408
Score = 53.2 bits (122), Expect = 9e-07
Identities = 42/153 (27%), Positives = 69/153 (45%), Gaps = 2/153 (1%)
Frame = +1
Query: 82 MNYENKIILAPMVRIGTLPMRLLALKYGADIVYTEELIDWKFLRSKRRFNDILNTVDYVD 261
++ K+ LAP+ G LP R + ++GAD+ E + L+ + +L
Sbjct: 59 LDIRGKLYLAPLTTCGNLPFRRICKRFGADVTCGEMAVCTNLLQGQMSEWALLKR----- 113
Query: 262 QTDGTIVFRTCEEEKKKVVLQLGTCDEARALKVAKLVEHDVAA--IDINMGCPKEFSIKG 435
CE+ +QL K A+L+ V +DIN+GCP + K
Sbjct: 114 --------HQCEDI---FGVQLEGAFPDTMTKCAELLSRTVEVDFVDINVGCPIDLVYKK 162
Query: 436 GMGVALLSKPDKAYQILKTLVDNLSIPVTCKIR 534
G G AL+++ K QI++ + L +P+T KIR
Sbjct: 163 GGGCALMNRSTKFQQIVRGMNQVLDVPLTVKIR 195
>AL365411-1|CAB96955.1| 465|Homo sapiens hypothetical protein,
similar to (AF091072.1) predicted protein [Homo sapiens]
protein.
Length = 465
Score = 53.2 bits (122), Expect = 9e-07
Identities = 42/153 (27%), Positives = 69/153 (45%), Gaps = 2/153 (1%)
Frame = +1
Query: 82 MNYENKIILAPMVRIGTLPMRLLALKYGADIVYTEELIDWKFLRSKRRFNDILNTVDYVD 261
++ K+ LAP+ G LP R + ++GAD+ E + L+ + +L
Sbjct: 284 LDIRGKLYLAPLTTCGNLPFRRICKRFGADVTCGEMAVCTNLLQGQMSEWALLKR----- 338
Query: 262 QTDGTIVFRTCEEEKKKVVLQLGTCDEARALKVAKLVEHDVAA--IDINMGCPKEFSIKG 435
CE+ +QL K A+L+ V +DIN+GCP + K
Sbjct: 339 --------HQCEDI---FGVQLEGAFPDTMTKCAELLSRTVEVDFVDINVGCPIDLVYKK 387
Query: 436 GMGVALLSKPDKAYQILKTLVDNLSIPVTCKIR 534
G G AL+++ K QI++ + L +P+T KIR
Sbjct: 388 GGGCALMNRSTKFQQIVRGMNQVLDVPLTVKIR 420
>AK023958-1|BAB14740.1| 650|Homo sapiens protein ( Homo sapiens
cDNA FLJ13896 fis, clone THYRO1001703, weakly similar to
NIFR3-LIKE PROTEIN. ).
Length = 650
Score = 53.2 bits (122), Expect = 9e-07
Identities = 42/153 (27%), Positives = 69/153 (45%), Gaps = 2/153 (1%)
Frame = +1
Query: 82 MNYENKIILAPMVRIGTLPMRLLALKYGADIVYTEELIDWKFLRSKRRFNDILNTVDYVD 261
++ K+ LAP+ G LP R + ++GAD+ E + L+ + +L
Sbjct: 301 LDIRGKLYLAPLTTCGNLPFRRICKRFGADVTCGEMAVCTNLLQGQMSEWALLKR----- 355
Query: 262 QTDGTIVFRTCEEEKKKVVLQLGTCDEARALKVAKLVEHDVAA--IDINMGCPKEFSIKG 435
CE+ +QL K A+L+ V +DIN+GCP + K
Sbjct: 356 --------HQCEDI---FGVQLEGAFPDTMTKCAELLSRTVEVDFVDINVGCPIDLVYKK 404
Query: 436 GMGVALLSKPDKAYQILKTLVDNLSIPVTCKIR 534
G G AL+++ K QI++ + L +P+T KIR
Sbjct: 405 GGGCALMNRSTKFQQIVRGMNQVLDVPLTVKIR 437
>BC017081-1|AAH17081.4| 406|Homo sapiens DUS1L protein protein.
Length = 406
Score = 52.4 bits (120), Expect = 2e-06
Identities = 27/93 (29%), Positives = 48/93 (51%)
Frame = +1
Query: 301 EKKKVVLQLGTCDEARALKVAKLVEHDVAAIDINMGCPKEFSIKGGMGVALLSKPDKAYQ 480
E + +++Q D ++ A L + AID+N+GCP+ + +G G L + D +
Sbjct: 5 EDRPLIVQFCANDPEVFVQAALLAQDYCDAIDLNLGCPQMIAKRGHYGAFLQDEWDLLQR 64
Query: 481 ILKTLVDNLSIPVTCKIRILKTPEATLELVNKL 579
++ + LS+PVTCKIR+ + T+ L
Sbjct: 65 MILLAHEKLSVPVTCKIRVFPEIDKTVRYAQML 97
>AF091072-1|AAC72941.1| 223|Homo sapiens unknown protein.
Length = 223
Score = 45.6 bits (103), Expect = 2e-04
Identities = 21/52 (40%), Positives = 33/52 (63%)
Frame = +1
Query: 379 DVAAIDINMGCPKEFSIKGGMGVALLSKPDKAYQILKTLVDNLSIPVTCKIR 534
+V +DIN+GCP + K G G AL+++ K QI++ + L +P+T KIR
Sbjct: 10 EVDFVDINVGCPIDLVYKKGGGCALMNRSTKFQQIVRGMNQVLDVPLTVKIR 61
>AC005757-1|AAC62258.1| 540|Homo sapiens R32611_1 protein.
Length = 540
Score = 34.3 bits (75), Expect = 0.44
Identities = 34/136 (25%), Positives = 59/136 (43%), Gaps = 12/136 (8%)
Frame = +1
Query: 202 KFLRSKRRFNDILNTVDYVDQTDGTIVFRTCE--EEK------KKVVLQLGTCDEARALK 357
K LR + F D+ + +D +D + ++TCE EE K V L+ DE A
Sbjct: 26 KLLRQLQEFTDLGHRLDCLDLKGEKLDYKTCEALEEVFKRLQFKVVDLEQTNLDEDGASA 85
Query: 358 VAKLVEHDVAAIDINMGCPKEFSIKGGMGVALLSKPDKAYQILKT----LVDNLSIPVTC 525
+ ++E+ +A +N+ K +G A + + Q L L+D+ S P
Sbjct: 86 LFDMIEYYESATHLNISFNKHIGTRGWQAAAHMMRKTSCLQYLDARNTPLLDH-SAPFVA 144
Query: 526 KIRILKTPEATLELVN 573
+ +++ A L L N
Sbjct: 145 RALRIRSSLAVLHLEN 160
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,348,670
Number of Sequences: 237096
Number of extensions: 1939263
Number of successful extensions: 3553
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3475
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3550
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8399192100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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