Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10c01
         (717 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL032643-4|CAA21662.1|  436|Caenorhabditis elegans Hypothetical ...   173   8e-44
Z81077-3|CAB03067.1|  527|Caenorhabditis elegans Hypothetical pr...    59   4e-09
AF125451-6|AAD12825.1|  554|Caenorhabditis elegans Hypothetical ...    58   6e-09
U21323-13|AAA62547.2|  284|Caenorhabditis elegans Hypothetical p...    48   5e-06
Z69792-6|CAA93669.2|  398|Caenorhabditis elegans Hypothetical pr...    30   1.9  
Z69790-5|CAA93657.2|  398|Caenorhabditis elegans Hypothetical pr...    30   1.9  
Z99278-1|CAB16490.1|  793|Caenorhabditis elegans Hypothetical pr...    29   4.4  
Z92831-2|CAB07368.2|  861|Caenorhabditis elegans Hypothetical pr...    29   4.4  
U23450-6|AAK31469.1|  790|Caenorhabditis elegans Hypothetical pr...    28   7.7  

>AL032643-4|CAA21662.1|  436|Caenorhabditis elegans Hypothetical
           protein Y54E5A.6 protein.
          Length = 436

 Score =  173 bits (422), Expect = 8e-44
 Identities = 85/164 (51%), Positives = 112/164 (68%)
 Frame = +1

Query: 88  YENKIILAPMVRIGTLPMRLLALKYGADIVYTEELIDWKFLRSKRRFNDILNTVDYVDQT 267
           Y NK ILAPMVR G  P+RLL LKYGAD+ YTEE++D K + + R  N+ L T+DY +  
Sbjct: 5   YRNKKILAPMVRAGRTPLRLLCLKYGADLCYTEEIVDKKLIEATRVVNEALGTIDYRNGD 64

Query: 268 DGTIVFRTCEEEKKKVVLQLGTCDEARALKVAKLVEHDVAAIDINMGCPKEFSIKGGMGV 447
           D  I+ R   EEK + +LQ+GT    +A K+A++V  DVA ID+NMGCPK FSI  GMG 
Sbjct: 65  D--IILRLAPEEKGRCILQIGTNSGEKAAKIAQIVGDDVAGIDVNMGCPKPFSIHCGMGA 122

Query: 448 ALLSKPDKAYQILKTLVDNLSIPVTCKIRILKTPEATLELVNKL 579
           ALL++ +K   IL +L     +PVTCKIR+L  PE TL+LV ++
Sbjct: 123 ALLTQTEKIVDILTSLKSAAKVPVTCKIRVLDDPEDTLKLVQEI 166


>Z81077-3|CAB03067.1|  527|Caenorhabditis elegans Hypothetical
           protein F36A2.2 protein.
          Length = 527

 Score = 58.8 bits (136), Expect = 4e-09
 Identities = 43/160 (26%), Positives = 73/160 (45%)
 Frame = +1

Query: 103 ILAPMVRIGTLPMRLLALKYGADIVYTEELIDWKFLRSKRRFNDILNTVDYVDQTDGTIV 282
           +LAPMV    L  R+   KYGA + +T  +    F+       + L  V    + D  +V
Sbjct: 76  VLAPMVDQSELAFRMFTRKYGAQLTFTPMIHAHLFVNDGTYRRNSLALV----KADRPLV 131

Query: 283 FRTCEEEKKKVVLQLGTCDEARALKVAKLVEHDVAAIDINMGCPKEFSIKGGMGVALLSK 462
            + C     KV   L  C         +LVE     +D+N+GCP+  + +G  G  L  +
Sbjct: 132 VQFC---ANKVDTFLAAC---------RLVEDVCDGVDLNLGCPQMVAKRGRYGSWLQDE 179

Query: 463 PDKAYQILKTLVDNLSIPVTCKIRILKTPEATLELVNKLI 582
            D   +++  + D   +P++CKIR+    + T+E   +L+
Sbjct: 180 VDLICEMVSAVRDYCRLPISCKIRVRDDRQQTVEYAKRLV 219


>AF125451-6|AAD12825.1|  554|Caenorhabditis elegans Hypothetical
           protein Y37E11B.5 protein.
          Length = 554

 Score = 58.0 bits (134), Expect = 6e-09
 Identities = 53/169 (31%), Positives = 72/169 (42%), Gaps = 9/169 (5%)
 Frame = +1

Query: 73  PINM-NYENKIILAPMVRIGTLPMRLLALKYGADIVYTEELIDWKFLRSKRRFNDILNTV 249
           P+NM + + K  LAP+  +G LP R + + YGADI   E  +    L        +L   
Sbjct: 196 PLNMGSLDGKKYLAPLTTVGNLPFRRICVDYGADITCGEMALATSILSGTASEYSLLKR- 254

Query: 250 DYVDQTDGTIVFRTCEEEKKKVVLQLGTCDEARALKVAKLVEHDVAAIDINMGCPKEFSI 429
                         CE+    V L  G  D         +   DV  IDINMGCP +   
Sbjct: 255 ------------HPCEKIFG-VQLAGGFADTMAKASQIVVENFDVDFIDINMGCPIDVVN 301

Query: 430 KGGMGVALLSKPDKAYQILKTLVDNLS--IPVTCKIR------ILKTPE 552
           + G G AL S+P K +++L      L    P+T KIR      +LK PE
Sbjct: 302 QKGGGCALPSRPQKLFEVLAATKSVLGGCCPLTVKIRTGMKEGVLKAPE 350


>U21323-13|AAA62547.2|  284|Caenorhabditis elegans Hypothetical
           protein C45G9.2 protein.
          Length = 284

 Score = 48.4 bits (110), Expect = 5e-06
 Identities = 44/157 (28%), Positives = 67/157 (42%), Gaps = 3/157 (1%)
 Frame = +1

Query: 115 MVRIGTLPMRLLALKYGADIVYTEELIDWKFLRSKRRFNDILNTVDYVDQTDGTIVFRTC 294
           MVR   L  R L   Y  D+ +T  +    F+ S++  +  L+                C
Sbjct: 1   MVRYSKLAFRQLVRVYDVDVCFTPMIYAKNFIESEKCRSSELSV---------------C 45

Query: 295 EEEKKKVVLQLGTCDEARALKVAKLVEHDVAAIDINMGCPKEFSIKGGMGVALLSKPDKA 474
           E +   +V Q  T D     + A++V      +D+N GCPK      G G ALLSKP+  
Sbjct: 46  EGDSPLIV-QFATDDPFVLSEAAEMVYKCSTGVDLNCGCPKHDVRSKGFGSALLSKPELL 104

Query: 475 YQILKTLVDNLSIP---VTCKIRILKTPEATLELVNK 576
             +++     +  P   V+ KIRI    E T++L  K
Sbjct: 105 ADMVRQTRARIPDPDFSVSLKIRINHDIEKTVDLCRK 141


>Z69792-6|CAA93669.2|  398|Caenorhabditis elegans Hypothetical
           protein F40E10.6 protein.
          Length = 398

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 17/33 (51%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
 Frame = -3

Query: 619 LFTYFAMTGIDMLSIYLPTLKWLLVSSV-FLSY 524
           +F ++A T  D+LS Y P LK+L V SV FLS+
Sbjct: 200 MFLFYAATR-DLLSPYRPVLKFLTVKSVIFLSF 231


>Z69790-5|CAA93657.2|  398|Caenorhabditis elegans Hypothetical
           protein F40E10.6 protein.
          Length = 398

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 17/33 (51%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
 Frame = -3

Query: 619 LFTYFAMTGIDMLSIYLPTLKWLLVSSV-FLSY 524
           +F ++A T  D+LS Y P LK+L V SV FLS+
Sbjct: 200 MFLFYAATR-DLLSPYRPVLKFLTVKSVIFLSF 231


>Z99278-1|CAB16490.1|  793|Caenorhabditis elegans Hypothetical
           protein Y53C12B.1 protein.
          Length = 793

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 15/58 (25%), Positives = 26/58 (44%)
 Frame = +1

Query: 130 TLPMRLLALKYGADIVYTEELIDWKFLRSKRRFNDILNTVDYVDQTDGTIVFRTCEEE 303
           T P++ +A K   + VYT   + W     ++ F+   N V  +D  D T  +   + E
Sbjct: 2   TEPIKEIAAKRSVEAVYTGGTVRWS-ANGQKLFSTCTNVVKVIDLADNTASYTIGDPE 58


>Z92831-2|CAB07368.2|  861|Caenorhabditis elegans Hypothetical
           protein F22G12.4 protein.
          Length = 861

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 14/43 (32%), Positives = 24/43 (55%)
 Frame = +1

Query: 379 DVAAIDINMGCPKEFSIKGGMGVALLSKPDKAYQILKTLVDNL 507
           DVA++ +N GC  E  +  G G  +L   D+++   +TL+  L
Sbjct: 367 DVASLLVNFGCDVESRVALGAGGEVLDDGDESWITKQTLLHRL 409


>U23450-6|AAK31469.1|  790|Caenorhabditis elegans Hypothetical
           protein C30B5.5 protein.
          Length = 790

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
 Frame = -1

Query: 378 MFH*FGNL*SSGFITRPEL*NHFFLFFFTSAEYNSSICLIN-IIYCVKYVVK 226
           +F  FGN  ++  +TRP + N   LF    A ++S + +    IY ++Y+++
Sbjct: 45  LFGLFGNATTALILTRPSMRNPNNLFLTALAVFDSCLLITAFFIYAMEYIIE 96


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,179,694
Number of Sequences: 27780
Number of extensions: 329632
Number of successful extensions: 811
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 780
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 810
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)