Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10b24
         (628 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    25   0.39 
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    23   1.6  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    23   2.1  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    23   2.1  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    23   2.1  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    23   2.8  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    22   3.7  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    22   4.8  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   8.4  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 25.4 bits (53), Expect = 0.39
 Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
 Frame = +2

Query: 500 CQKPISSYQ-YLHPKHT*NKCKLSRKVF*IKLGRNI 604
           CQ  +  Y  Y  PKHT   C++  + F   LGR +
Sbjct: 432 CQDKLGDYACYCPPKHTGKNCEIYDRGFPGGLGRAV 467



 Score = 21.8 bits (44), Expect = 4.8
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +3

Query: 417 VFMVSCENRNLWNKISTIKNCNKPNKENVKN 509
           V MVSC++  L   +   K CN    E++ N
Sbjct: 136 VEMVSCKDAALRKVVPLKKLCNNGTCEDIGN 166


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +3

Query: 465 TIKNCNKPNKENVKNPLVRTN 527
           ++KNC   NKE    PL+ T+
Sbjct: 93  SVKNCKLKNKERKVKPLLITD 113


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = +3

Query: 435 ENRNLWNKISTIKNCNKPNKENVKNPLVRTNTYIQSTPKTSVN 563
           EN+ L N+ S   + NK +K+N  +P +R         KT  N
Sbjct: 99  ENKTLINETSLQLDENKLDKKNDDSPALRALLTRPQAKKTPPN 141


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = +3

Query: 435 ENRNLWNKISTIKNCNKPNKENVKNPLVRTNTYIQSTPKTSVN 563
           EN+ L N+ S   + NK +K+N  +P +R         KT  N
Sbjct: 99  ENKTLINETSLQLDENKLDKKNDDSPALRALLTRPQAKKTPPN 141


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = -3

Query: 578 ILFLIIYTCFRCALDVGIGTN*WVFDIFFI 489
           I F + Y   +  LD+G     +VFD+F++
Sbjct: 180 IFFDMFYQHHKIVLDMGKNCVTYVFDLFYL 209


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -3

Query: 134 HYFLKQFHY 108
           H+F KQFHY
Sbjct: 181 HFFKKQFHY 189



 Score = 21.8 bits (44), Expect = 4.8
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = -1

Query: 133 IIS*NNFITTTLFYR 89
           IIS + F+TTT FYR
Sbjct: 237 IISGSIFMTTTSFYR 251


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +3

Query: 474 NCNKPNKENVKNPLVRTNTYIQSTPKTSVNY 566
           N  K N   +KNP ++T   I    + SVNY
Sbjct: 78  NLKKFNALKLKNPNLKTLVAIGGWNEGSVNY 108


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
 Frame = -3

Query: 383 LSYFLE*VKFVIVTKSNIFIISCSIKF*AHV---VILQNIYSA 264
           L Y  + V  +  TKSNIFI+  S+     +   +IL NI+ A
Sbjct: 85  LLYSKQIVTILKKTKSNIFILKESVDTFNDIFGWIILCNIFEA 127


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = -2

Query: 144 KKYPLFPKTISLQQHYFIEVHNFTPYFL 61
           K + L P++I L++  FI+      +FL
Sbjct: 14  KFFALTPRSIKLEKQTFIQKFYAVAFFL 41


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,404
Number of Sequences: 336
Number of extensions: 3180
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16083914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)