Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10b24
(628 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41107-11|AAC71161.1| 454|Caenorhabditis elegans Hypothetical p... 34 0.096
U41107-10|AAN39669.1| 416|Caenorhabditis elegans Hypothetical p... 34 0.096
U41107-9|AAK73877.1| 471|Caenorhabditis elegans Hypothetical pr... 34 0.096
U41107-8|AAN39670.1| 468|Caenorhabditis elegans Hypothetical pr... 34 0.096
AJ243182-1|CAB45863.1| 2857|Caenorhabditis elegans inositol 1,4,... 31 0.89
AJ243181-1|CAB45862.1| 2836|Caenorhabditis elegans inositol 1,4,... 31 0.89
AJ243180-1|CAB45861.1| 2892|Caenorhabditis elegans inositol 1,4,... 31 0.89
AJ243179-1|CAB45860.1| 2846|Caenorhabditis elegans inositol 1,4,... 31 0.89
AF168688-1|AAF05302.1| 2846|Caenorhabditis elegans inositol 1,4,... 31 0.89
AF036702-4|AAK68365.1| 2857|Caenorhabditis elegans Inositol trip... 31 0.89
AF036702-3|AAK68366.1| 2846|Caenorhabditis elegans Inositol trip... 31 0.89
AF036702-2|AAW30669.1| 2836|Caenorhabditis elegans Inositol trip... 31 0.89
AF036702-1|AAW30668.1| 2892|Caenorhabditis elegans Inositol trip... 31 0.89
U50197-4|AAA91257.1| 443|Caenorhabditis elegans Intermediate fi... 29 2.7
U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical p... 29 2.7
U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical p... 29 2.7
U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical p... 29 2.7
U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical p... 29 2.7
Z36752-2|CAA85324.1| 371|Caenorhabditis elegans Hypothetical pr... 28 4.8
AC024796-11|AAK29890.2| 828|Caenorhabditis elegans Hypothetical... 28 4.8
AC024775-7|AAK68451.1| 251|Caenorhabditis elegans Hypothetical ... 28 4.8
U46674-3|AAA85755.1| 301|Caenorhabditis elegans Hypothetical pr... 28 6.3
AF039710-6|AAB96688.1| 392|Caenorhabditis elegans Hypothetical ... 28 6.3
Z22181-1|CAA80179.1| 710|Caenorhabditis elegans Hypothetical pr... 27 8.3
L11247-6|AAA28005.2| 367|Caenorhabditis elegans Hypothetical pr... 27 8.3
AF220526-1|AAF43009.1| 332|Caenorhabditis elegans DNAse II homo... 27 8.3
AC092690-1|AAK73856.2| 427|Caenorhabditis elegans Hypothetical ... 27 8.3
>U41107-11|AAC71161.1| 454|Caenorhabditis elegans Hypothetical
protein F55C12.1a protein.
Length = 454
Score = 33.9 bits (74), Expect = 0.096
Identities = 19/56 (33%), Positives = 37/56 (66%), Gaps = 3/56 (5%)
Frame = +3
Query: 279 LENDNMRLKLDATRNNENIAFRDD--DKLDLLQ-KIAELNKQKSQLMHHVFMVSCE 437
LE + +R K+D R+ E+I+ R+D +++++L+ K+AEL K+K ++ + S E
Sbjct: 217 LETEELRRKVDGPRS-ESISDREDMHEEIEILKAKVAELMKEKEEMTDQLLATSVE 271
>U41107-10|AAN39669.1| 416|Caenorhabditis elegans Hypothetical
protein F55C12.1c protein.
Length = 416
Score = 33.9 bits (74), Expect = 0.096
Identities = 19/56 (33%), Positives = 37/56 (66%), Gaps = 3/56 (5%)
Frame = +3
Query: 279 LENDNMRLKLDATRNNENIAFRDD--DKLDLLQ-KIAELNKQKSQLMHHVFMVSCE 437
LE + +R K+D R+ E+I+ R+D +++++L+ K+AEL K+K ++ + S E
Sbjct: 179 LETEELRRKVDGPRS-ESISDREDMHEEIEILKAKVAELMKEKEEMTDQLLATSVE 233
>U41107-9|AAK73877.1| 471|Caenorhabditis elegans Hypothetical
protein F55C12.1b protein.
Length = 471
Score = 33.9 bits (74), Expect = 0.096
Identities = 19/56 (33%), Positives = 37/56 (66%), Gaps = 3/56 (5%)
Frame = +3
Query: 279 LENDNMRLKLDATRNNENIAFRDD--DKLDLLQ-KIAELNKQKSQLMHHVFMVSCE 437
LE + +R K+D R+ E+I+ R+D +++++L+ K+AEL K+K ++ + S E
Sbjct: 234 LETEELRRKVDGPRS-ESISDREDMHEEIEILKAKVAELMKEKEEMTDQLLATSVE 288
>U41107-8|AAN39670.1| 468|Caenorhabditis elegans Hypothetical
protein F55C12.1d protein.
Length = 468
Score = 33.9 bits (74), Expect = 0.096
Identities = 19/56 (33%), Positives = 37/56 (66%), Gaps = 3/56 (5%)
Frame = +3
Query: 279 LENDNMRLKLDATRNNENIAFRDD--DKLDLLQ-KIAELNKQKSQLMHHVFMVSCE 437
LE + +R K+D R+ E+I+ R+D +++++L+ K+AEL K+K ++ + S E
Sbjct: 231 LETEELRRKVDGPRS-ESISDREDMHEEIEILKAKVAELMKEKEEMTDQLLATSVE 285
>AJ243182-1|CAB45863.1| 2857|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2857
Score = 30.7 bits (66), Expect = 0.89
Identities = 18/36 (50%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = -3
Query: 224 QLVNTVVIVVAFKS--GLECRVVIKTYY*RSIHYFL 123
QLVN +V VVAF S GLE R + + R++HY L
Sbjct: 2501 QLVNKIVHVVAFVSNKGLEDRPIAEILACRNLHYLL 2536
>AJ243181-1|CAB45862.1| 2836|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2836
Score = 30.7 bits (66), Expect = 0.89
Identities = 18/36 (50%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = -3
Query: 224 QLVNTVVIVVAFKS--GLECRVVIKTYY*RSIHYFL 123
QLVN +V VVAF S GLE R + + R++HY L
Sbjct: 2480 QLVNKIVHVVAFVSNKGLEDRPIAEILACRNLHYLL 2515
>AJ243180-1|CAB45861.1| 2892|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2892
Score = 30.7 bits (66), Expect = 0.89
Identities = 18/36 (50%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = -3
Query: 224 QLVNTVVIVVAFKS--GLECRVVIKTYY*RSIHYFL 123
QLVN +V VVAF S GLE R + + R++HY L
Sbjct: 2536 QLVNKIVHVVAFVSNKGLEDRPIAEILACRNLHYLL 2571
>AJ243179-1|CAB45860.1| 2846|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2846
Score = 30.7 bits (66), Expect = 0.89
Identities = 18/36 (50%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = -3
Query: 224 QLVNTVVIVVAFKS--GLECRVVIKTYY*RSIHYFL 123
QLVN +V VVAF S GLE R + + R++HY L
Sbjct: 2490 QLVNKIVHVVAFVSNKGLEDRPIAEILACRNLHYLL 2525
>AF168688-1|AAF05302.1| 2846|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2846
Score = 30.7 bits (66), Expect = 0.89
Identities = 18/36 (50%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = -3
Query: 224 QLVNTVVIVVAFKS--GLECRVVIKTYY*RSIHYFL 123
QLVN +V VVAF S GLE R + + R++HY L
Sbjct: 2490 QLVNKIVHVVAFVSNKGLEDRPIAEILACRNLHYLL 2525
>AF036702-4|AAK68365.1| 2857|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform e protein.
Length = 2857
Score = 30.7 bits (66), Expect = 0.89
Identities = 18/36 (50%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = -3
Query: 224 QLVNTVVIVVAFKS--GLECRVVIKTYY*RSIHYFL 123
QLVN +V VVAF S GLE R + + R++HY L
Sbjct: 2501 QLVNKIVHVVAFVSNKGLEDRPIAEILACRNLHYLL 2536
>AF036702-3|AAK68366.1| 2846|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform f protein.
Length = 2846
Score = 30.7 bits (66), Expect = 0.89
Identities = 18/36 (50%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = -3
Query: 224 QLVNTVVIVVAFKS--GLECRVVIKTYY*RSIHYFL 123
QLVN +V VVAF S GLE R + + R++HY L
Sbjct: 2490 QLVNKIVHVVAFVSNKGLEDRPIAEILACRNLHYLL 2525
>AF036702-2|AAW30669.1| 2836|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform d protein.
Length = 2836
Score = 30.7 bits (66), Expect = 0.89
Identities = 18/36 (50%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = -3
Query: 224 QLVNTVVIVVAFKS--GLECRVVIKTYY*RSIHYFL 123
QLVN +V VVAF S GLE R + + R++HY L
Sbjct: 2480 QLVNKIVHVVAFVSNKGLEDRPIAEILACRNLHYLL 2515
>AF036702-1|AAW30668.1| 2892|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform a protein.
Length = 2892
Score = 30.7 bits (66), Expect = 0.89
Identities = 18/36 (50%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = -3
Query: 224 QLVNTVVIVVAFKS--GLECRVVIKTYY*RSIHYFL 123
QLVN +V VVAF S GLE R + + R++HY L
Sbjct: 2536 QLVNKIVHVVAFVSNKGLEDRPIAEILACRNLHYLL 2571
>U50197-4|AAA91257.1| 443|Caenorhabditis elegans Intermediate
filament, d protein 2 protein.
Length = 443
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/66 (25%), Positives = 32/66 (48%)
Frame = +3
Query: 306 LDATRNNENIAFRDDDKLDLLQKIAELNKQKSQLMHHVFMVSCENRNLWNKISTIKNCNK 485
L A N RD+ + + ++ IA+LN + ++ + V + +NR L N I +N
Sbjct: 37 LSAYAQNAAAIIRDNREREKVE-IADLNNRLARYVEKVRFLEAQNRVLENDIGVFRNAAH 95
Query: 486 PNKENV 503
+ E +
Sbjct: 96 THSERI 101
>U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical
protein F35D11.11a protein.
Length = 1840
Score = 29.1 bits (62), Expect = 2.7
Identities = 22/105 (20%), Positives = 47/105 (44%), Gaps = 3/105 (2%)
Frame = +3
Query: 264 RRINVLENDNMRLKLDATRNNENIAFRDDDKLDLLQKIAELNKQKSQLMHHVFMVSCENR 443
RRI+VLE D +L +I + + ++L+ K+ + +L + ++ +N
Sbjct: 984 RRISVLEGDVEKLTAGIAERESSINALESNTMELISKLETTEAELEKLKDELAVMLKQNS 1043
Query: 444 NLWN-KISTIKNCNKPNK--ENVKNPLVRTNTYIQSTPKTSVNYQ 569
L N K + N+ K +++ + L N + + +VN +
Sbjct: 1044 ELKNGKEGLSEKWNEERKKIQDLADQLREANKVVHNMRMKNVNLE 1088
>U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical
protein F35D11.11c protein.
Length = 1898
Score = 29.1 bits (62), Expect = 2.7
Identities = 22/105 (20%), Positives = 47/105 (44%), Gaps = 3/105 (2%)
Frame = +3
Query: 264 RRINVLENDNMRLKLDATRNNENIAFRDDDKLDLLQKIAELNKQKSQLMHHVFMVSCENR 443
RRI+VLE D +L +I + + ++L+ K+ + +L + ++ +N
Sbjct: 984 RRISVLEGDVEKLTAGIAERESSINALESNTMELISKLETTEAELEKLKDELAVMLKQNS 1043
Query: 444 NLWN-KISTIKNCNKPNK--ENVKNPLVRTNTYIQSTPKTSVNYQ 569
L N K + N+ K +++ + L N + + +VN +
Sbjct: 1044 ELKNGKEGLSEKWNEERKKIQDLADQLREANKVVHNMRMKNVNLE 1088
>U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical
protein F35D11.11d protein.
Length = 1671
Score = 29.1 bits (62), Expect = 2.7
Identities = 22/105 (20%), Positives = 47/105 (44%), Gaps = 3/105 (2%)
Frame = +3
Query: 264 RRINVLENDNMRLKLDATRNNENIAFRDDDKLDLLQKIAELNKQKSQLMHHVFMVSCENR 443
RRI+VLE D +L +I + + ++L+ K+ + +L + ++ +N
Sbjct: 744 RRISVLEGDVEKLTAGIAERESSINALESNTMELISKLETTEAELEKLKDELAVMLKQNS 803
Query: 444 NLWN-KISTIKNCNKPNK--ENVKNPLVRTNTYIQSTPKTSVNYQ 569
L N K + N+ K +++ + L N + + +VN +
Sbjct: 804 ELKNGKEGLSEKWNEERKKIQDLADQLREANKVVHNMRMKNVNLE 848
>U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical
protein F35D11.11b protein.
Length = 1911
Score = 29.1 bits (62), Expect = 2.7
Identities = 22/105 (20%), Positives = 47/105 (44%), Gaps = 3/105 (2%)
Frame = +3
Query: 264 RRINVLENDNMRLKLDATRNNENIAFRDDDKLDLLQKIAELNKQKSQLMHHVFMVSCENR 443
RRI+VLE D +L +I + + ++L+ K+ + +L + ++ +N
Sbjct: 984 RRISVLEGDVEKLTAGIAERESSINALESNTMELISKLETTEAELEKLKDELAVMLKQNS 1043
Query: 444 NLWN-KISTIKNCNKPNK--ENVKNPLVRTNTYIQSTPKTSVNYQ 569
L N K + N+ K +++ + L N + + +VN +
Sbjct: 1044 ELKNGKEGLSEKWNEERKKIQDLADQLREANKVVHNMRMKNVNLE 1088
>Z36752-2|CAA85324.1| 371|Caenorhabditis elegans Hypothetical
protein F35H8.2 protein.
Length = 371
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = -2
Query: 297 ACCHSPKHLFCVVV-IDNDPSWHEEPTREHCGDC 199
A HSP H FC V+ I+++P + E R GDC
Sbjct: 121 AMMHSPIHFFCFVLDINSEPLFKERMFR--LGDC 152
>AC024796-11|AAK29890.2| 828|Caenorhabditis elegans Hypothetical
protein Y48G1C.8 protein.
Length = 828
Score = 28.3 bits (60), Expect = 4.8
Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 1/94 (1%)
Frame = +3
Query: 147 IVSFNNDSTFQATLKGDYNHHSVHELALHAMRDRCLLLQRRINVLENDNMRLKLDATRNN 326
++ +NDS Q L+ D + H+L M+D + + ++L++D + + + NN
Sbjct: 610 VIGHHNDSLDQIQLQHDQHQQQQHQL----MQDVSIAQDAQGHLLDDDLLDMSQEDVLNN 665
Query: 327 ENIAFRDDDKLDLLQKIAELNKQKSQL-MHHVFM 425
DDD L + A + QL H+++
Sbjct: 666 GYDLEFDDDPLTQQENPAPYFENPRQLETGHIYL 699
>AC024775-7|AAK68451.1| 251|Caenorhabditis elegans Hypothetical
protein Y41D4A.1 protein.
Length = 251
Score = 28.3 bits (60), Expect = 4.8
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 477 CNKPNKENVKNPLVRTNT 530
C PN +NV NP++ T T
Sbjct: 81 CTSPNSQNVPNPIITTTT 98
>U46674-3|AAA85755.1| 301|Caenorhabditis elegans Hypothetical
protein T26A8.2 protein.
Length = 301
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +3
Query: 399 SQLMHHVFMVSCENRNLWNKISTIKNCNKPNKENVKNPLVRTNTY 533
SQL+HH VS EN+ +N ++++ N + + +N + T Y
Sbjct: 95 SQLLHHFSDVSEENKQNFNNQNSLQTLNIEFQMSTQNLSINTLIY 139
>AF039710-6|AAB96688.1| 392|Caenorhabditis elegans Hypothetical
protein C46E10.3 protein.
Length = 392
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = +3
Query: 342 RDDDKLDLLQKIAELNKQKSQLMHHVFMVSCENRNLWNKISTIKNCNKPNKENVKN 509
RD ++ DLL++I +Q Q + +V +NR L ++ ++ N VK+
Sbjct: 126 RDLEREDLLRQIDVFRQQSFQTAQNYQLVLTDNRTLLSRTDQLEQANTRLTSQVKS 181
>Z22181-1|CAA80179.1| 710|Caenorhabditis elegans Hypothetical
protein ZK632.2 protein.
Length = 710
Score = 27.5 bits (58), Expect = 8.3
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +3
Query: 243 DRCLLLQRRINVLENDNMRLKLDATRNNENIAFRDDDKLDLLQKIAELNKQKSQ 404
D C +L NVL N +L++ N + +DD L L + +L KQ+ +
Sbjct: 343 DACRILDT-YNVLRKSNTKLRMQRKTLEANDYYDEDDDL-YLDRTGQLEKQREK 394
>L11247-6|AAA28005.2| 367|Caenorhabditis elegans Hypothetical
protein F09G8.2 protein.
Length = 367
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 381 ELNKQKSQLMHHVFMVSCENRNLW 452
++N+QKSQL + +NRNLW
Sbjct: 306 DMNRQKSQLKRGGGALCIQNRNLW 329
>AF220526-1|AAF43009.1| 332|Caenorhabditis elegans DNAse II homolog
F09G8.2 protein.
Length = 332
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 381 ELNKQKSQLMHHVFMVSCENRNLW 452
++N+QKSQL + +NRNLW
Sbjct: 281 DMNRQKSQLKRGGGALCIQNRNLW 304
>AC092690-1|AAK73856.2| 427|Caenorhabditis elegans Hypothetical
protein BE0003N10.2 protein.
Length = 427
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +3
Query: 426 VSCENRNLWNKISTIKNCNKPNKENVKNPLVRT 524
V C + +++ +KNC P K + K+PL+ T
Sbjct: 296 VICAGFSAFSRSFCLKNCKNPKKMSQKSPLLLT 328
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,457,310
Number of Sequences: 27780
Number of extensions: 278226
Number of successful extensions: 742
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 689
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 733
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1374536540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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