Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10b24
         (628 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          24   1.4  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      24   1.4  
AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    24   1.4  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    24   1.4  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          23   2.4  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      23   2.4  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    23   2.4  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    22   5.6  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   7.4  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    21   9.8  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -2

Query: 129 FPKTISLQQHYFIEVHNFTPYFL 61
           F + + L   YF+  HN+ P+ L
Sbjct: 222 FTEDVGLNHFYFMLNHNYPPFML 244


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -2

Query: 129 FPKTISLQQHYFIEVHNFTPYFL 61
           F + + L   YF+  HN+ P+ L
Sbjct: 222 FTEDVGLNHFYFMLNHNYPPFML 244


>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
          protein.
          Length = 139

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -2

Query: 78 FTPYFLLKLCHNCVH 34
          FT Y +   C NC+H
Sbjct: 26 FTMYLVRAFCRNCIH 40


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -2

Query: 78  FTPYFLLKLCHNCVH 34
           FT Y +   C NC+H
Sbjct: 474 FTMYLVRAFCRNCIH 488


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -2

Query: 126 PKTISLQQHYFIEVHNFTPYFLLKLCHN 43
           PK I  Q +YF+     T YFL ++ ++
Sbjct: 253 PKEIRGQLYYFLHKQLMTRYFLERMSND 280


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -2

Query: 126 PKTISLQQHYFIEVHNFTPYFLLKLCHN 43
           PK I  Q +YF+     T YFL ++ ++
Sbjct: 253 PKEIRGQLYYFLHKQLMTRYFLERMSND 280


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -2

Query: 363 GQVCHRHEKQYF 328
           G +C RH+K+YF
Sbjct: 294 GFLCERHQKRYF 305


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = +1

Query: 202 ITTVFTSWLFMP*GIVVYYYN 264
           + T+FT    +P  +++YYY+
Sbjct: 212 VATIFTFSYCIPMILIIYYYS 232


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -2

Query: 126 PKTISLQQHYFIEVHNF 76
           P +IS  QH F+E+  F
Sbjct: 549 PISISKNQHLFVELDQF 565


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +3

Query: 444 NLWNKISTIKNCNKPNKENVKNPL 515
           N W  IS + NC+   +E  +N L
Sbjct: 273 NTWEPISNLINCSDILEEFERNRL 296


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,953
Number of Sequences: 438
Number of extensions: 3458
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18704709
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)