Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10b24
(628 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g32530.1 68415.m03974 cellulose synthase family protein simil... 29 1.9
At5g37055.1 68418.m04446 zinc finger (HIT type) family protein c... 29 2.5
At1g10450.1 68414.m01176 paired amphipathic helix repeat-contain... 29 2.5
At5g62520.2 68418.m07846 expressed protein 29 3.3
At5g62520.1 68418.m07847 expressed protein 29 3.3
At3g49650.1 68416.m05426 kinesin motor protein-related several k... 29 3.3
At3g02710.1 68416.m00262 nuclear associated protein-related / NA... 28 5.8
At5g12150.1 68418.m01426 pleckstrin homology (PH) domain-contain... 27 7.7
At2g15090.1 68415.m01720 fatty acid elongase, putative similar ... 27 7.7
>At2g32530.1 68415.m03974 cellulose synthase family protein similar
to cellulose synthase catalytic subunit from Arabidopsis
thaliana [gi:5230423], cellulose synthase-5 from Zea
mays [gi:9622882]
Length = 755
Score = 29.5 bits (63), Expect = 1.9
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +1
Query: 211 VFTSWLFMP*GIVVYYYNAE*MFWRM-TTCA*NLMLQEIMKILLFVTMTNLTYSRK 375
+++ W FM G V + A FWR+ TTC+ + +I+ LL ++ T ++K
Sbjct: 583 LYSLWEFMSLGFSVQSWFASQSFWRIKTTCSWLFSIPDIILKLLGISKTVFIVTKK 638
>At5g37055.1 68418.m04446 zinc finger (HIT type) family protein
contains Pfam profile: PF04438 HIT zinc finger
Length = 171
Score = 29.1 bits (62), Expect = 2.5
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +3
Query: 267 RINVLENDNMRLKLDATRNNENIAFRDDDKLDLLQK 374
R+ LENDN +++ ++E + +DD L LQK
Sbjct: 38 RLEALENDNGAIEVIDLNDDEEASLDEDDDLGYLQK 73
>At1g10450.1 68414.m01176 paired amphipathic helix repeat-containing
protein similar to Sin3 protein [Yarrowia lipolytica]
GI:18076824; contains Pfam profile PF02671: Paired
amphipathic helix repeat
Length = 1173
Score = 29.1 bits (62), Expect = 2.5
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 4/69 (5%)
Frame = +3
Query: 288 DNMRLKLDAT----RNNENIAFRDDDKLDLLQKIAELNKQKSQLMHHVFMVSCENRNLWN 455
DN+R D + +N +DDK + K++E NK S+++ VSC N
Sbjct: 775 DNVRSNKDKQSCDKKGAKNKTRAEDDKQENCHKLSENNKTASEMLVSGTKVSCHEEN--- 831
Query: 456 KISTIKNCN 482
+ + NCN
Sbjct: 832 --NRVMNCN 838
>At5g62520.2 68418.m07846 expressed protein
Length = 241
Score = 28.7 bits (61), Expect = 3.3
Identities = 17/58 (29%), Positives = 26/58 (44%)
Frame = +3
Query: 135 DTSSIVSFNNDSTFQATLKGDYNHHSVHELALHAMRDRCLLLQRRINVLENDNMRLKL 308
D+SS SF ++ L+GD H ++ + D+C +L N N R KL
Sbjct: 29 DSSSDRSFADELGLMELLEGDKAHDLIYRNCKSGLGDQCQILSVLRNGFRNVGSRAKL 86
>At5g62520.1 68418.m07847 expressed protein
Length = 309
Score = 28.7 bits (61), Expect = 3.3
Identities = 17/58 (29%), Positives = 26/58 (44%)
Frame = +3
Query: 135 DTSSIVSFNNDSTFQATLKGDYNHHSVHELALHAMRDRCLLLQRRINVLENDNMRLKL 308
D+SS SF ++ L+GD H ++ + D+C +L N N R KL
Sbjct: 29 DSSSDRSFADELGLMELLEGDKAHDLIYRNCKSGLGDQCQILSVLRNGFRNVGSRAKL 86
>At3g49650.1 68416.m05426 kinesin motor protein-related several
kinesin-like proteins
Length = 813
Score = 28.7 bits (61), Expect = 3.3
Identities = 14/65 (21%), Positives = 28/65 (43%)
Frame = +3
Query: 276 VLENDNMRLKLDATRNNENIAFRDDDKLDLLQKIAELNKQKSQLMHHVFMVSCENRNLWN 455
++E + R + + E + D D L +I K+K H F N+N++
Sbjct: 24 LMEKERGRDIVRVNNSKEVVVLDPDLSKDYLDRIQNRTKEKKYCFDHAFGPESTNKNVYR 83
Query: 456 KISTI 470
+S++
Sbjct: 84 SMSSV 88
>At3g02710.1 68416.m00262 nuclear associated protein-related /
NAP-related similar to Nuclear associated protein (NAP)
(NYD-SP19) (Swiss-Prot:Q8WYA6) [Homo sapiens]
Length = 529
Score = 27.9 bits (59), Expect = 5.8
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = +3
Query: 201 NHHSVHELALHAMRDRCLLLQRRINVLENDNMRLKLDATRNNENIAFRDDDKLDLLQKIA 380
+H+ V L L ++ L +RR+ DN+ +L N E A + D D LQK+
Sbjct: 42 SHNGVEALDLKTLKKLVLSFERRLR----DNIAARLKYVENPEKFADSEVDLHDDLQKLK 97
Query: 381 EL 386
L
Sbjct: 98 VL 99
>At5g12150.1 68418.m01426 pleckstrin homology (PH) domain-containing
protein / RhoGAP domain-containing protein weak
similarity to glucocorticoid receptor DNA binding factor
1 [Canis familiaris] GI:23266717; contains Pfam profiles
PF00169: PH domain, PF00620: RhoGAP domain
Length = 827
Score = 27.5 bits (58), Expect = 7.7
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +3
Query: 327 ENIAFRDDDKLDLLQKIAELNKQKSQLMHH 416
E IA + D L QK+AEL+ Q SQ H
Sbjct: 654 EEIALAEADVARLKQKVAELHHQLSQQRQH 683
>At2g15090.1 68415.m01720 fatty acid elongase, putative similar to
fatty acid elongase 1 [GI:881615]
Length = 481
Score = 27.5 bits (58), Expect = 7.7
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -2
Query: 153 LLLKKYPLFPKTISLQQHYFIEVHNFTPYFLLKLCHNCVH 34
L LK+ F T ++++ E+ N+TP F L H C+H
Sbjct: 341 LPLKEKLAFFITFVKKKYFKPELRNYTPDFKLAFEHFCIH 380
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,166,077
Number of Sequences: 28952
Number of extensions: 238182
Number of successful extensions: 537
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 528
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 537
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1275599520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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