Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10b23
         (592 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q16WQ2 Cluster: Putative uncharacterized protein; n=1; ...    35   1.6  
UniRef50_A5K8Y9 Cluster: Putative uncharacterized protein; n=2; ...    34   2.9  
UniRef50_Q6VZJ2 Cluster: CNPV155 variola B22R-like protein; n=2;...    32   8.7  
UniRef50_A1RFT4 Cluster: Putative uncharacterized protein; n=3; ...    32   8.7  

>UniRef50_Q16WQ2 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 244

 Score = 34.7 bits (76), Expect = 1.6
 Identities = 16/45 (35%), Positives = 25/45 (55%)
 Frame = +3

Query: 258 SDQPSNENNNAGGKGSDSSNAVEPSSDQLAMESAERDAPSHAYNG 392
           SD P  ++ +      D  ++V PS+D+ A+ SA R  PSH  +G
Sbjct: 96  SDPPRTKSPSVRHSAEDQPSSVRPSADKEAIRSAVRRRPSHLQSG 140


>UniRef50_A5K8Y9 Cluster: Putative uncharacterized protein; n=2;
            Eukaryota|Rep: Putative uncharacterized protein -
            Plasmodium vivax
          Length = 2323

 Score = 33.9 bits (74), Expect = 2.9
 Identities = 19/48 (39%), Positives = 23/48 (47%)
 Frame = +3

Query: 249  GTLSDQPSNENNNAGGKGSDSSNAVEPSSDQLAMESAERDAPSHAYNG 392
            G   D PSNE N A  K S    A + SSD+LA +  E  A  +   G
Sbjct: 1148 GRERDSPSNEANGAPKKLSSQGKAEQSSSDKLATQEEESHADRNLQTG 1195


>UniRef50_Q6VZJ2 Cluster: CNPV155 variola B22R-like protein; n=2;
           Avipoxvirus|Rep: CNPV155 variola B22R-like protein -
           Canarypox virus (CNPV)
          Length = 1830

 Score = 32.3 bits (70), Expect = 8.7
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = +2

Query: 95  LNICN*VCINLRDKNAITKTLRRTFIKTIEAVQNAAKKRSHYRH 226
           LNI +     L+ KN ++ +L     + IE++++A K   HY H
Sbjct: 494 LNILDVPIPRLKGKNIVSSSLSSIAFRKIESIRSAVKTNKHYHH 537


>UniRef50_A1RFT4 Cluster: Putative uncharacterized protein; n=3;
           Shewanella|Rep: Putative uncharacterized protein -
           Shewanella sp. (strain W3-18-1)
          Length = 280

 Score = 32.3 bits (70), Expect = 8.7
 Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
 Frame = +2

Query: 5   CYH-QCSWNVTEGASVVSH--LLFRSIDSYYWELNICN*VCINLRDK 136
           CY  QCSW  +E A+V+SH  L+ RS +  +W+  +C    +  R +
Sbjct: 111 CYFSQCSWQESECANVLSHPLLIGRSAEQAHWQ-TLCQGSAVEQRHR 156


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 509,453,030
Number of Sequences: 1657284
Number of extensions: 8519226
Number of successful extensions: 31482
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 28807
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31345
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41073165837
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)