Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10b23
         (592 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    22   4.5  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    22   4.5  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   5.9  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   5.9  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   5.9  

>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = +3

Query: 360 ERDAPSHAYNG 392
           E DAPSHA NG
Sbjct: 303 EIDAPSHAGNG 313


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -1

Query: 286 LLFSLDGWSLRVPLICSMSRMPIVRPLL 203
           +LFS +G  +R+P +   S     +PLL
Sbjct: 188 ILFSAEGVEIRIPDVIKTSGPHKFQPLL 215


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 11/38 (28%), Positives = 17/38 (44%)
 Frame = -1

Query: 295 PPALLFSLDGWSLRVPLICSMSRMPIVRPLLSRILYCF 182
           PP +L  +  WS + P     +   I   L + I+Y F
Sbjct: 521 PPQVLCYITSWSQKRPGAGKFTPEDINPSLCTHIIYAF 558


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -3

Query: 335 G*RFYSIAGVGSFAACIVILIGWLVT 258
           G RFY   G+    A + I  G+L++
Sbjct: 523 GFRFYIACGIMILVANVAISFGYLIS 548


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -3

Query: 335 G*RFYSIAGVGSFAACIVILIGWLVT 258
           G RFY   G+    A + I  G+L++
Sbjct: 523 GFRFYIACGIMILVANVAISFGYLIS 548


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,701
Number of Sequences: 336
Number of extensions: 2134
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14830622
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)