Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10b23
         (592 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68116-7|CAA92170.1|  238|Caenorhabditis elegans Hypothetical pr...    27   7.5  
AF456249-1|AAL59607.1|  238|Caenorhabditis elegans secreted 2-im...    27   7.5  
Z69646-2|CAA93475.1| 1087|Caenorhabditis elegans Hypothetical pr...    27   10.0 
Z69646-1|CAA93473.3| 1209|Caenorhabditis elegans Hypothetical pr...    27   10.0 
U53336-9|AAA96181.1|  257|Caenorhabditis elegans Pax (paired box...    27   10.0 
U41995-2|AAA83460.1|  317|Caenorhabditis elegans Serpentine rece...    27   10.0 

>Z68116-7|CAA92170.1|  238|Caenorhabditis elegans Hypothetical
           protein F42F12.2 protein.
          Length = 238

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 21/61 (34%), Positives = 27/61 (44%)
 Frame = +2

Query: 74  IDSYYWELNICN*VCINLRDKNAITKTLRRTFIKTIEAVQNAAKKRSHYRHSTHTAYERN 253
           + S YWELN        +R +   T  +    +   + V NAA   SHYR    TA  RN
Sbjct: 61  LPSIYWELN-------GMRIQGEETSNVYENILNDGKQVSNAAMVSSHYRIPCATA--RN 111

Query: 254 S 256
           S
Sbjct: 112 S 112


>AF456249-1|AAL59607.1|  238|Caenorhabditis elegans secreted
           2-immunoglobulin-domainprotein ZIG-2 protein.
          Length = 238

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 21/61 (34%), Positives = 27/61 (44%)
 Frame = +2

Query: 74  IDSYYWELNICN*VCINLRDKNAITKTLRRTFIKTIEAVQNAAKKRSHYRHSTHTAYERN 253
           + S YWELN        +R +   T  +    +   + V NAA   SHYR    TA  RN
Sbjct: 61  LPSIYWELN-------GMRIQGEETSNVYENILNDGKQVSNAAMVSSHYRIPCATA--RN 111

Query: 254 S 256
           S
Sbjct: 112 S 112


>Z69646-2|CAA93475.1| 1087|Caenorhabditis elegans Hypothetical protein
            F57C7.1b protein.
          Length = 1087

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +3

Query: 258  SDQPSNENNNAGGKGSDSSNAVEPSSD 338
            SD PS   +  G + SDS +A + SSD
Sbjct: 979  SDSPSPSASRTGNQSSDSDSASDDSSD 1005


>Z69646-1|CAA93473.3| 1209|Caenorhabditis elegans Hypothetical protein
            F57C7.1a protein.
          Length = 1209

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +3

Query: 258  SDQPSNENNNAGGKGSDSSNAVEPSSD 338
            SD PS   +  G + SDS +A + SSD
Sbjct: 979  SDSPSPSASRTGNQSSDSDSASDDSSD 1005


>U53336-9|AAA96181.1|  257|Caenorhabditis elegans Pax (paired box)
           transcriptionfactor protein 1 protein.
          Length = 257

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = +3

Query: 279 NNNAGGKGSDSSNAVEPSSDQLAMESAERDAPSHAY 386
           N N G   S SS+ +    DQLA +  ++    H Y
Sbjct: 186 NKNGGNSSSSSSSQLRYIRDQLAEQQQQQHLQQHQY 221


>U41995-2|AAA83460.1|  317|Caenorhabditis elegans Serpentine
           receptor, class x protein46 protein.
          Length = 317

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 14/23 (60%), Positives = 17/23 (73%), Gaps = 1/23 (4%)
 Frame = -2

Query: 207 FLAAFCT-ASIVFINVLLNVFVI 142
           F A FC   SI+FI VL++VFVI
Sbjct: 167 FYAIFCKYISIIFIIVLIDVFVI 189


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,679,488
Number of Sequences: 27780
Number of extensions: 201537
Number of successful extensions: 725
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 701
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 725
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1247656244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)