SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10b20
         (366 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC024190-1|AAH24190.1|  125|Homo sapiens MAPBPIP protein protein.     144   8e-35
AL355388-17|CAH72637.1|  150|Homo sapiens mitogen-activated prot...   144   8e-35
AL355388-15|CAH72635.1|  125|Homo sapiens mitogen-activated prot...   144   8e-35
AL355388-16|CAH72636.1|   95|Homo sapiens mitogen-activated prot...   123   2e-28
BC090933-1|AAH90933.1| 1102|Homo sapiens ADNP protein protein.         29   3.5  
BC075794-1|AAH75794.1| 1102|Homo sapiens activity-dependent neur...    29   3.5  
AL034553-1|CAB53748.2| 1102|Homo sapiens activity-dependent neur...    29   3.5  
AF250860-1|AAG47651.1| 1102|Homo sapiens activity-dependent neur...    29   3.5  
AB018327-1|BAA34504.1| 1073|Homo sapiens KIAA0784 protein protein.     29   3.5  

>BC024190-1|AAH24190.1|  125|Homo sapiens MAPBPIP protein protein.
          Length = 125

 Score =  144 bits (349), Expect = 8e-35
 Identities = 64/92 (69%), Positives = 81/92 (88%)
 Frame = +2

Query: 89  MLKPKALTEVLSQANTGGVENTLLLNHQGALLAYSGYNDKDARVTAAIASNVWSAYEKHG 268
           ML+PKALT+VLSQANTGGV++TLLLN++G+LLAYSGY D DARVTAAIASN+W+AY+++G
Sbjct: 1   MLRPKALTQVLSQANTGGVQSTLLLNNEGSLLAYSGYGDTDARVTAAIASNIWAAYDRNG 60

Query: 269 RNVFKEDGLHLILVDCLNGKIAITQVAXLLLC 364
              F ED L  IL+DC+ G++AIT+VA LLLC
Sbjct: 61  NQAFNEDNLKFILMDCMEGRVAITRVANLLLC 92


>AL355388-17|CAH72637.1|  150|Homo sapiens mitogen-activated
           protein-binding protein-interacting protein (MAPBPIP)
           protein.
          Length = 150

 Score =  144 bits (349), Expect = 8e-35
 Identities = 64/92 (69%), Positives = 81/92 (88%)
 Frame = +2

Query: 89  MLKPKALTEVLSQANTGGVENTLLLNHQGALLAYSGYNDKDARVTAAIASNVWSAYEKHG 268
           ML+PKALT+VLSQANTGGV++TLLLN++G+LLAYSGY D DARVTAAIASN+W+AY+++G
Sbjct: 1   MLRPKALTQVLSQANTGGVQSTLLLNNEGSLLAYSGYGDTDARVTAAIASNIWAAYDRNG 60

Query: 269 RNVFKEDGLHLILVDCLNGKIAITQVAXLLLC 364
              F ED L  IL+DC+ G++AIT+VA LLLC
Sbjct: 61  NQAFNEDNLKFILMDCMEGRVAITRVANLLLC 92


>AL355388-15|CAH72635.1|  125|Homo sapiens mitogen-activated
           protein-binding protein-interacting protein (MAPBPIP)
           protein.
          Length = 125

 Score =  144 bits (349), Expect = 8e-35
 Identities = 64/92 (69%), Positives = 81/92 (88%)
 Frame = +2

Query: 89  MLKPKALTEVLSQANTGGVENTLLLNHQGALLAYSGYNDKDARVTAAIASNVWSAYEKHG 268
           ML+PKALT+VLSQANTGGV++TLLLN++G+LLAYSGY D DARVTAAIASN+W+AY+++G
Sbjct: 1   MLRPKALTQVLSQANTGGVQSTLLLNNEGSLLAYSGYGDTDARVTAAIASNIWAAYDRNG 60

Query: 269 RNVFKEDGLHLILVDCLNGKIAITQVAXLLLC 364
              F ED L  IL+DC+ G++AIT+VA LLLC
Sbjct: 61  NQAFNEDNLKFILMDCMEGRVAITRVANLLLC 92


>AL355388-16|CAH72636.1|   95|Homo sapiens mitogen-activated
           protein-binding protein-interacting protein (MAPBPIP)
           protein.
          Length = 95

 Score =  123 bits (296), Expect = 2e-28
 Identities = 54/77 (70%), Positives = 68/77 (88%)
 Frame = +2

Query: 89  MLKPKALTEVLSQANTGGVENTLLLNHQGALLAYSGYNDKDARVTAAIASNVWSAYEKHG 268
           ML+PKALT+VLSQANTGGV++TLLLN++G+LLAYSGY D DARVTAAIASN+W+AY+++G
Sbjct: 1   MLRPKALTQVLSQANTGGVQSTLLLNNEGSLLAYSGYGDTDARVTAAIASNIWAAYDRNG 60

Query: 269 RNVFKEDGLHLILVDCL 319
              F ED L  IL+DC+
Sbjct: 61  NQAFNEDNLKFILMDCM 77


>BC090933-1|AAH90933.1| 1102|Homo sapiens ADNP protein protein.
          Length = 1102

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = +2

Query: 233 ASNVWSAYEKHGRNVFKEDGLHLILVDC 316
           +S  +SAY+ H RNV  ED  + IL++C
Sbjct: 82  SSKFFSAYKSHFRNVHSEDFENRILLNC 109


>BC075794-1|AAH75794.1| 1102|Homo sapiens activity-dependent
           neuroprotector homeobox protein.
          Length = 1102

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = +2

Query: 233 ASNVWSAYEKHGRNVFKEDGLHLILVDC 316
           +S  +SAY+ H RNV  ED  + IL++C
Sbjct: 82  SSKFFSAYKSHFRNVHSEDFENRILLNC 109


>AL034553-1|CAB53748.2| 1102|Homo sapiens activity-dependent
           neuroprotector protein.
          Length = 1102

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = +2

Query: 233 ASNVWSAYEKHGRNVFKEDGLHLILVDC 316
           +S  +SAY+ H RNV  ED  + IL++C
Sbjct: 82  SSKFFSAYKSHFRNVHSEDFENRILLNC 109


>AF250860-1|AAG47651.1| 1102|Homo sapiens activity-dependent
           neuroprotective protein protein.
          Length = 1102

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = +2

Query: 233 ASNVWSAYEKHGRNVFKEDGLHLILVDC 316
           +S  +SAY+ H RNV  ED  + IL++C
Sbjct: 82  SSKFFSAYKSHFRNVHSEDFENRILLNC 109


>AB018327-1|BAA34504.1| 1073|Homo sapiens KIAA0784 protein protein.
          Length = 1073

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = +2

Query: 233 ASNVWSAYEKHGRNVFKEDGLHLILVDC 316
           +S  +SAY+ H RNV  ED  + IL++C
Sbjct: 53  SSKFFSAYKSHFRNVHSEDFENRILLNC 80


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 41,894,935
Number of Sequences: 237096
Number of extensions: 607132
Number of successful extensions: 1565
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1469
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1565
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2306171440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -