BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10b19
(706 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ416109-1|CAC94781.1| 234|Anopheles gambiae PROSAg25 protein p... 440 e-125
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein. 26 1.3
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein. 25 2.3
AY341160-1|AAR13724.1| 159|Anopheles gambiae CED6 protein. 24 4.1
AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubu... 23 9.4
>AJ416109-1|CAC94781.1| 234|Anopheles gambiae PROSAg25 protein
protein.
Length = 234
Score = 440 bits (1084), Expect = e-125
Identities = 206/232 (88%), Positives = 219/232 (94%)
Frame = +2
Query: 11 MASERYSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYDEH 190
MASERYSFSLTTFSPSGKLVQIEYALAAVAAG SVGIKA NGVVIATENK KSILYDEH
Sbjct: 1 MASERYSFSLTTFSPSGKLVQIEYALAAVAAGAPSVGIKAVNGVVIATENKQKSILYDEH 60
Query: 191 SVNKVEMITGHIGMVYSGMGPDYRLLVTQARKMAQQYFLMYHEPIPTAQLVQRVATVMQE 370
SV+KVEM+T HIGM+YSGMGPDYRLLV QARK+AQ Y+L Y EPIPT+QLVQ+VATVMQE
Sbjct: 61 SVHKVEMVTNHIGMIYSGMGPDYRLLVKQARKLAQNYYLTYREPIPTSQLVQKVATVMQE 120
Query: 371 YTQSGGVRPFGVSLLICGWEEGRPYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTE 550
YTQSGGVRPFGVSLLICGW++GRPYLFQCDPSGAYFAWKATAMGKN NNGKTFLEKRY+E
Sbjct: 121 YTQSGGVRPFGVSLLICGWDDGRPYLFQCDPSGAYFAWKATAMGKNANNGKTFLEKRYSE 180
Query: 551 DLELDDAVHTAILTLKEGFEGQMTADNIEVGICDASGFRRLXPAHVKDYLAN 706
DLELDDAVHTAILTLKEGFEGQM ADNIEVGICDA+GFRRL P+ V+DYLAN
Sbjct: 181 DLELDDAVHTAILTLKEGFEGQMNADNIEVGICDANGFRRLDPSDVQDYLAN 232
>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
Length = 3318
Score = 25.8 bits (54), Expect = 1.3
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +2
Query: 38 LTTFSPSGKLVQIEYALAAVAAGGTSVGIKASN 136
++ P G+ I +A +A GG VG A+N
Sbjct: 2678 VSLIDPDGQFAFISIIVAVLAVGGAYVGASAAN 2710
>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
Length = 1664
Score = 25.0 bits (52), Expect = 2.3
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = +2
Query: 410 LLICGWEEGRPYLFQCDPSGAYFAW 484
+++ W E L CD SG F W
Sbjct: 67 VILVKWNEPYQKLASCDSSGIIFVW 91
>AY341160-1|AAR13724.1| 159|Anopheles gambiae CED6 protein.
Length = 159
Score = 24.2 bits (50), Expect = 4.1
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = -3
Query: 695 NPSRGLAXSDGTRSRHRC 642
N S L S+GT RH C
Sbjct: 108 NSSNNLTTSNGTEDRHEC 125
>AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubule
binding protein protein.
Length = 838
Score = 23.0 bits (47), Expect = 9.4
Identities = 12/28 (42%), Positives = 13/28 (46%), Gaps = 1/28 (3%)
Frame = -2
Query: 465 EGSH-WNR*GRPSSQPQINRDTPKGRTP 385
EGS WN RP Q + R PK P
Sbjct: 540 EGSQEWNSRSRPPQQHSMLRTGPKSLAP 567
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 790,766
Number of Sequences: 2352
Number of extensions: 15692
Number of successful extensions: 34
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71922660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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