Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10b18
         (578 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   1.8  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         25   2.3  
AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.     23   7.2  
CR954257-1|CAJ14152.1|  324|Anopheles gambiae putative dodecenoy...    23   9.5  
AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein p...    23   9.5  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
            differentiation regulator protein.
          Length = 1283

 Score = 25.0 bits (52), Expect = 1.8
 Identities = 18/73 (24%), Positives = 36/73 (49%)
 Frame = +2

Query: 263  TPAVHNISSTFSSIHGVSAAFAAIYDCSSAAPSDLRQPTPVTAYVHKSAAPAPDVRQSAR 442
            +P++ N ++  ++    +AA  A    +S     + Q    TA + + A PAP    +++
Sbjct: 1163 SPSIPNSNAGAATPTATTAAPLAPTTGNSKGGGGVVQGDTATA-LDEVALPAPPAPPTSK 1221

Query: 443  AASATTGPAITSA 481
                T+GPA++ A
Sbjct: 1222 RDRRTSGPAVSDA 1234


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 24.6 bits (51), Expect = 2.3
 Identities = 14/50 (28%), Positives = 19/50 (38%)
 Frame = +2

Query: 335  YDCSSAAPSDLRQPTPVTAYVHKSAAPAPDVRQSARAASATTGPAITSAD 484
            Y  +      L     +  Y H  A P+P VR +       TG A TS +
Sbjct: 1925 YKATGQNDGPLSTGVTIAEYGHWVAPPSPMVRANITFGGIETGAAATSRE 1974


>AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.
          Length = 189

 Score = 23.0 bits (47), Expect = 7.2
 Identities = 12/47 (25%), Positives = 20/47 (42%)
 Frame = +2

Query: 344 SSAAPSDLRQPTPVTAYVHKSAAPAPDVRQSARAASATTGPAITSAD 484
           S+AAP      +P TA    +   A   +++     ATT    T+ +
Sbjct: 119 STAAPEGTSVASPTTAEASTTTEAATTTQEATTTEEATTTEEATTTE 165


>CR954257-1|CAJ14152.1|  324|Anopheles gambiae putative
           dodecenoylCoA deltaisomerase protein.
          Length = 324

 Score = 22.6 bits (46), Expect = 9.5
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = +2

Query: 302 IHGVSAAFAAIYDCSSAAPSDLRQPTPVTAYVH 400
           +HG+  +F + YD S  A    ++P    + VH
Sbjct: 95  LHGIGGSFCSGYDLSELAGQ--QEPQQALSIVH 125


>AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein
           protein.
          Length = 357

 Score = 22.6 bits (46), Expect = 9.5
 Identities = 18/75 (24%), Positives = 31/75 (41%)
 Frame = +2

Query: 257 ANTPAVHNISSTFSSIHGVSAAFAAIYDCSSAAPSDLRQPTPVTAYVHKSAAPAPDVRQS 436
           A++PAV       +++   + A       ++AAP+ +  P    A    +AAPA     +
Sbjct: 179 ASSPAVPAAPVATAALAATAFAATNAASVATAAPAAITAPAANAAST--AAAPAAATAHA 236

Query: 437 ARAASATTGPAITSA 481
           A A+   T      A
Sbjct: 237 ATASPVATAALAAGA 251


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 331,566
Number of Sequences: 2352
Number of extensions: 4694
Number of successful extensions: 14
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55086417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)