Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10b18
         (578 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g30700.1 68415.m03745 expressed protein                             28   5.2  
At5g14450.1 68418.m01691 GDSL-motif lipase/hydrolase family prot...    27   9.0  

>At2g30700.1 68415.m03745 expressed protein
          Length = 480

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
 Frame = +2

Query: 314 SAAFAAIYDC--SSAAPSDLRQPTPVTAYVHKSAAPAPDVRQSARA 445
           +AAF  +  C  + A P + ++PT V       AAP+P    S  A
Sbjct: 290 NAAFRILSSCKVNKACPLEFKEPTEVIKACRNVAAPSPSCCSSLNA 335


>At5g14450.1 68418.m01691 GDSL-motif lipase/hydrolase family protein
           similar to early nodulin ENOD8 [Medicago sativa]
           GI:304037, elicitor-induced glycoprotein iEP4 [Daucus
           carota] GI:1911765, pollen-expressed coil protein
           [Medicago sativa] GI:1110502; contains InterPro Entry
           IPR001087 Lipolytic enzyme, G-D-S-L family
          Length = 389

 Score = 27.1 bits (57), Expect = 9.0
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +2

Query: 254 TANTPAVHNISSTFSSIHGVSAAFAAIYD 340
           T   PA++N   + S   G+SAAF  I D
Sbjct: 36  TCTFPAIYNFGDSNSDTGGISAAFEPIRD 64


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,800,657
Number of Sequences: 28952
Number of extensions: 103096
Number of successful extensions: 338
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 326
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 338
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1131744440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)