Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10b15
         (623 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_16635| Best HMM Match : Pribosyltran (HMM E-Value=7.1e-17)         159   1e-39
SB_32706| Best HMM Match : No HMM Matches (HMM E-Value=.)              37   0.012
SB_48574| Best HMM Match : Pribosyltran (HMM E-Value=2.5e-18)          35   0.047
SB_48269| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.1  
SB_7486| Best HMM Match : Frizzled (HMM E-Value=0)                     29   4.1  
SB_48595| Best HMM Match : Transposase_29 (HMM E-Value=3.5)            28   7.1  
SB_27246| Best HMM Match : C2 (HMM E-Value=0.026)                      28   7.1  
SB_34561| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.1  
SB_34070| Best HMM Match : Mucin (HMM E-Value=5.8)                     28   7.1  

>SB_16635| Best HMM Match : Pribosyltran (HMM E-Value=7.1e-17)
          Length = 227

 Score =  159 bits (387), Expect = 1e-39
 Identities = 76/84 (90%), Positives = 81/84 (96%)
 Frame = +1

Query: 370 VEIGESVRGEDVYIVQSGSGEINDNLMELLIMINACKIASASRVTAVIPCFPYARQDKKD 549
           VEI ESVRGEDVYI+QSG GEINDN+MELLIMINACKIASA RVTAVIPCFPYARQDKKD
Sbjct: 2   VEIAESVRGEDVYIIQSGCGEINDNMMELLIMINACKIASAQRVTAVIPCFPYARQDKKD 61

Query: 550 KSRAPITAKLVANILSVSGADHII 621
           KSRAPI+AKLVAN+LSV+GADHII
Sbjct: 62  KSRAPISAKLVANMLSVAGADHII 85


>SB_32706| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 136

 Score = 37.1 bits (82), Expect = 0.012
 Identities = 16/30 (53%), Positives = 22/30 (73%)
 Frame = +1

Query: 448 MELLIMINACKIASASRVTAVIPCFPYARQ 537
           MELL+M++  + ASA R+  VIP + YARQ
Sbjct: 1   MELLLMVSTMRRASAKRINVVIPYYGYARQ 30


>SB_48574| Best HMM Match : Pribosyltran (HMM E-Value=2.5e-18)
          Length = 270

 Score = 35.1 bits (77), Expect = 0.047
 Identities = 19/38 (50%), Positives = 24/38 (63%)
 Frame = +1

Query: 508 VIPCFPYARQDKKDKSRAPITAKLVANILSVSGADHII 621
           VIP  PY++Q K  K R  I AKL+A++L  SG   II
Sbjct: 2   VIPYLPYSKQSKMHK-RGAIPAKLMASLLGKSGLTSII 38


>SB_48269| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1720

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 13/39 (33%), Positives = 23/39 (58%)
 Frame = +1

Query: 256  IKVFSGSSHPDLAQKIVDRLGIDLGKVVTKKFSNMETCV 372
            + +  GS HP+LA  + +R+G + G+ V +K     TC+
Sbjct: 1190 VDILMGSDHPELALALEERVG-EPGEPVARKTPQGWTCI 1227


>SB_7486| Best HMM Match : Frizzled (HMM E-Value=0)
          Length = 535

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 15/45 (33%), Positives = 21/45 (46%)
 Frame = +1

Query: 412 VQSGSGEINDNLMELLIMINACKIASASRVTAVIPCFPYARQDKK 546
           VQ G     D L  L++ I    + S    TAVI C+ Y   +K+
Sbjct: 416 VQRGGQAKTDKLERLIVRIGIFSVLSTVPATAVIACYFYEYANKE 460


>SB_48595| Best HMM Match : Transposase_29 (HMM E-Value=3.5)
          Length = 565

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = +3

Query: 525 VRAARQKRQEQSPDHGQTRCQHPFSVWSRSH 617
           VR A  K +E SP     RC+ P S W + H
Sbjct: 384 VRGAEGKEEENSPS--ARRCEDPPSHWGKEH 412


>SB_27246| Best HMM Match : C2 (HMM E-Value=0.026)
          Length = 576

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 17/49 (34%), Positives = 23/49 (46%)
 Frame = +1

Query: 439 DNLMELLIMINACKIASASRVTAVIPCFPYARQDKKDKSRAPITAKLVA 585
           +  MEL+++I    +A     T       YA + KKDKS  P   K VA
Sbjct: 151 ERTMELMVLIILAIVAGILIATVAASGVYYAYRTKKDKSATPKGKKGVA 199


>SB_34561| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 448

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +2

Query: 530 RGKTKKTRAEPRSRPNSLPTSFQ 598
           RG+T+  R+ P SRP  LP  +Q
Sbjct: 179 RGRTRGNRSTPYSRPRELPDRWQ 201


>SB_34070| Best HMM Match : Mucin (HMM E-Value=5.8)
          Length = 541

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = +2

Query: 512 YLASRTRGKTKKTRAEPRSRPNSLPTSFQCLEPIT 616
           YL  R RG+  + +  P++RP + P +     P T
Sbjct: 230 YLTGRRRGRVTRPKTRPKTRPKTRPKTRPKTRPKT 264


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,225,164
Number of Sequences: 59808
Number of extensions: 341568
Number of successful extensions: 880
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 839
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 880
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1548368000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)