Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10b15
(623 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g35390.2 68415.m04339 ribose-phosphate pyrophosphokinase 1 / ... 135 2e-32
At2g35390.1 68415.m04338 ribose-phosphate pyrophosphokinase 1 / ... 135 2e-32
At2g44530.1 68415.m05539 ribose-phosphate pyrophosphokinase, put... 134 4e-32
At1g32380.1 68414.m03995 ribose-phosphate pyrophosphokinase 2 / ... 131 3e-31
At1g10700.1 68414.m01217 ribose-phosphate pyrophosphokinase 3 / ... 36 0.022
At1g26900.1 68414.m03280 pentatricopeptide (PPR) repeat-containi... 31 0.82
At3g50230.1 68416.m05493 leucine-rich repeat transmembrane prote... 30 1.4
At1g68640.1 68414.m07843 bZIP family transcription factor (PERIA... 29 1.9
At5g66950.1 68418.m08440 expressed protein 29 2.5
At4g37050.1 68417.m05247 patatin, putative similar to patatin-li... 28 4.4
At3g60330.1 68416.m06743 ATPase, plasma membrane-type, putative ... 28 5.8
At5g21900.1 68418.m02539 expressed protein 27 7.7
>At2g35390.2 68415.m04339 ribose-phosphate pyrophosphokinase 1 /
phosphoribosyl diphosphate synthetase 1 (PRSI) identical
to phosphoribosyl diphosphate synthetase 1
(ribose-phosphate pyrophosphokinase 1 (PRS I)
[Arabidopsis thaliana] GI:633140, SP|Q42581
Length = 403
Score = 135 bits (327), Expect = 2e-32
Identities = 66/122 (54%), Positives = 93/122 (76%)
Frame = +1
Query: 256 IKVFSGSSHPDLAQKIVDRLGIDLGKVVTKKFSNMETCVEIGESVRGEDVYIVQSGSGEI 435
+K+FSG+++P LAQ+I +G+DLGKV K+F++ E V++ ESVRG DVY+VQ
Sbjct: 93 LKLFSGTANPALAQEIAWYMGLDLGKVNIKRFADGEIYVQLQESVRGCDVYLVQPTCTPT 152
Query: 436 NDNLMELLIMINACKIASASRVTAVIPCFPYARQDKKDKSRAPITAKLVANILSVSGADH 615
N+NLMELLIM++AC+ ASA +VTAVIP F YAR D+K + R I AKLVAN+++ +GAD
Sbjct: 153 NENLMELLIMVDACRRASAKKVTAVIPYFGYARADRKTQGRESIAAKLVANLITEAGADR 212
Query: 616 II 621
++
Sbjct: 213 VL 214
>At2g35390.1 68415.m04338 ribose-phosphate pyrophosphokinase 1 /
phosphoribosyl diphosphate synthetase 1 (PRSI) identical
to phosphoribosyl diphosphate synthetase 1
(ribose-phosphate pyrophosphokinase 1 (PRS I)
[Arabidopsis thaliana] GI:633140, SP|Q42581
Length = 352
Score = 135 bits (327), Expect = 2e-32
Identities = 66/122 (54%), Positives = 93/122 (76%)
Frame = +1
Query: 256 IKVFSGSSHPDLAQKIVDRLGIDLGKVVTKKFSNMETCVEIGESVRGEDVYIVQSGSGEI 435
+K+FSG+++P LAQ+I +G+DLGKV K+F++ E V++ ESVRG DVY+VQ
Sbjct: 42 LKLFSGTANPALAQEIAWYMGLDLGKVNIKRFADGEIYVQLQESVRGCDVYLVQPTCTPT 101
Query: 436 NDNLMELLIMINACKIASASRVTAVIPCFPYARQDKKDKSRAPITAKLVANILSVSGADH 615
N+NLMELLIM++AC+ ASA +VTAVIP F YAR D+K + R I AKLVAN+++ +GAD
Sbjct: 102 NENLMELLIMVDACRRASAKKVTAVIPYFGYARADRKTQGRESIAAKLVANLITEAGADR 161
Query: 616 II 621
++
Sbjct: 162 VL 163
>At2g44530.1 68415.m05539 ribose-phosphate pyrophosphokinase,
putative / phosphoribosyl diphosphate synthetase,
putative very strong similarity to phosphoribosyl
pyrophosphate synthase [Spinacia oleracea] GI:4902849;
contains Pfam profile PF00156: Phosphoribosyl
transferase domain
Length = 394
Score = 134 bits (324), Expect = 4e-32
Identities = 68/134 (50%), Positives = 97/134 (72%)
Frame = +1
Query: 220 DHVLPLTTRMPNIKVFSGSSHPDLAQKIVDRLGIDLGKVVTKKFSNMETCVEIGESVRGE 399
D + TTR+ ++FSG+++P LAQ+I LG+DLGK+ K+F++ E V++ ESVRG
Sbjct: 69 DSIYQNTTRL---RIFSGTANPILAQEISCYLGLDLGKIKIKRFADGEIYVQLQESVRGC 125
Query: 400 DVYIVQSGSGEINDNLMELLIMINACKIASASRVTAVIPCFPYARQDKKDKSRAPITAKL 579
DV++VQ N+NLMELL+MI+AC+ ASA +TAVIP F YAR D+K + R I AKL
Sbjct: 126 DVFLVQPTCPPANENLMELLVMIDACRRASAKTITAVIPYFGYARADRKTQGRESIAAKL 185
Query: 580 VANILSVSGADHII 621
VAN+++ SGAD ++
Sbjct: 186 VANLITQSGADRVL 199
>At1g32380.1 68414.m03995 ribose-phosphate pyrophosphokinase 2 /
phosphoribosyl diphosphate synthetase 2 (PRS2) identical
to SP:Q42583 from [Arabidopsis thaliana]; strong
similarity to phosphoribosyl diphosphate synthetase 1
(ribose-phosphate pyrophosphokinase 1 (PRS I)
[Arabidopsis thaliana] GI:633140, SP|Q42581
Length = 400
Score = 131 bits (317), Expect = 3e-31
Identities = 63/122 (51%), Positives = 93/122 (76%)
Frame = +1
Query: 256 IKVFSGSSHPDLAQKIVDRLGIDLGKVVTKKFSNMETCVEIGESVRGEDVYIVQSGSGEI 435
+K+FSG+++P L+Q+I +G++LGKV K+F++ E V++ ESVRG DV++VQ
Sbjct: 90 LKLFSGTANPALSQEIAWYMGLELGKVSIKRFADGEIYVQLKESVRGCDVFLVQPTCTPT 149
Query: 436 NDNLMELLIMINACKIASASRVTAVIPCFPYARQDKKDKSRAPITAKLVANILSVSGADH 615
N+NLMELLIM++AC+ ASA +VTAVIP F YAR D+K + R I AKLVAN+++ +GAD
Sbjct: 150 NENLMELLIMVDACRRASAKKVTAVIPYFGYARADRKTQGRESIAAKLVANLITEAGADR 209
Query: 616 II 621
++
Sbjct: 210 VL 211
>At1g10700.1 68414.m01217 ribose-phosphate pyrophosphokinase 3 /
phosphoribosyl diphosphate synthetase 3 (PRS3) nearly
identical to phosphoribosyl diphosphate synthase
GI:4902470 from [Arabidopsis thaliana]
Length = 411
Score = 35.9 bits (79), Expect = 0.022
Identities = 32/115 (27%), Positives = 52/115 (45%), Gaps = 3/115 (2%)
Frame = +1
Query: 262 VFSGSSHPDLAQKIVDRLG-IDLGKVVTKKFSN--METCVEIGESVRGEDVYIVQSGSGE 432
+F DLA++IV + I+L + KKF + ++ + +RG+ V + S S
Sbjct: 103 LFHSDETRDLAERIVAKSDCIELRSINWKKFDDGFPNLFIQNAQGIRGQHVAFLASFSSP 162
Query: 433 INDNLMELLIMINACKIASASRVTAVIPCFPYARQDKKDKSRAPITAKLVANILS 597
+ E L +I A S T V+P FP ++ + TA +A ILS
Sbjct: 163 AV--IFEQLSVIYALPKLFVSSFTLVLPFFPTGTSERMEDEGDVATAFTLARILS 215
>At1g26900.1 68414.m03280 pentatricopeptide (PPR) repeat-containing
protein contains INTERPRO:IPR002885 PPR repeats
Length = 572
Score = 30.7 bits (66), Expect = 0.82
Identities = 34/127 (26%), Positives = 57/127 (44%), Gaps = 9/127 (7%)
Frame = +1
Query: 163 SGLVSMKSTITLEDVVNKLDHVLPLTTRMPN--IKVFSGSSHPDLAQKIVDRL---GIDL 327
S L++ S + + + +HV M N I+ +S S P+ A + ++L G+ L
Sbjct: 64 SKLLAFSSVLDIRYASSIFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTL 123
Query: 328 GK---VVTKKFSNMETCVEIGESVRGEDVYIVQSGSGEINDNLMELLIMINAC-KIASAS 495
+ + T K + E CV IGE + G ++SG D L+ C KI+ A
Sbjct: 124 DRFSFITTLKSCSRELCVSIGEGLHG---IALRSGFMVFTDLRNALIHFYCVCGKISDAR 180
Query: 496 RVTAVIP 516
+V +P
Sbjct: 181 KVFDEMP 187
>At3g50230.1 68416.m05493 leucine-rich repeat transmembrane protein
kinase, putative receptor-like protein kinase (RKL1),
Arabidopsis thaliana, EMBL:AF084034
Length = 660
Score = 29.9 bits (64), Expect = 1.4
Identities = 19/64 (29%), Positives = 32/64 (50%)
Frame = +1
Query: 121 ISVLSLRIAPLATTSGLVSMKSTITLEDVVNKLDHVLPLTTRMPNIKVFSGSSHPDLAQK 300
+S L+L L T +++ S I+ N L ++PLT + S SS+P L +
Sbjct: 172 LSSLNLEFNRLNGTLPPLNLSSLISFNVSSNNLTGLVPLTKTLLRFNASSFSSNPGLCGE 231
Query: 301 IVDR 312
I++R
Sbjct: 232 IINR 235
>At1g68640.1 68414.m07843 bZIP family transcription factor
(PERIANTHIA) identical to transcription factor
PERIANTHIA GB:AAD19660 GI:4378757 from [Arabidopsis
thaliana]
Length = 452
Score = 29.5 bits (63), Expect = 1.9
Identities = 16/65 (24%), Positives = 30/65 (46%)
Frame = +1
Query: 250 PNIKVFSGSSHPDLAQKIVDRLGIDLGKVVTKKFSNMETCVEIGESVRGEDVYIVQSGSG 429
PN+ + S + H ++D G G + + E C++ G+ V + +V G G
Sbjct: 48 PNVTIASANLHYTTFDTVMDCGGGGGGGLRERLEGGEEECLDTGQLVYQKGTRLVGGGVG 107
Query: 430 EINDN 444
E+N +
Sbjct: 108 EVNSS 112
>At5g66950.1 68418.m08440 expressed protein
Length = 870
Score = 29.1 bits (62), Expect = 2.5
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +1
Query: 268 SGSSHPDLAQKIVDRLGIDLG 330
SG HP++ QK+ +R GI LG
Sbjct: 766 SGMVHPEIVQKLAEREGISLG 786
>At4g37050.1 68417.m05247 patatin, putative similar to patatin-like
latex allergen [Hevea brasiliensis][PMID:10589016];
contains patatin domain PF01734
Length = 339
Score = 28.3 bits (60), Expect = 4.4
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Frame = +1
Query: 307 DRLGIDLGKVVTKKFSNMETCVEIGESVRGEDVYIVQSGSGE---INDNLMELLIMINAC 477
D L DLG V NME VE+GE++ + V V SG I++N+ +
Sbjct: 261 DSLKGDLGSVDISTEKNMEGLVEVGEALLKKRVSRVNLESGHYQPISENVTNEEALKRFA 320
Query: 478 KIASASR 498
K+ S R
Sbjct: 321 KVLSEER 327
>At3g60330.1 68416.m06743 ATPase, plasma membrane-type, putative /
proton pump, putative similar to P-type
H(+)-transporting ATPase from Nicotiana plumbaginifolia
[SP|Q08435, SP|Q08436], Lycopersicon esculentum
[GI:5901757, SP|P22180], Solanum tuberosum [GI:435003];
contains InterPro accession IPR001757: ATPase, E1-E2
type
Length = 961
Score = 27.9 bits (59), Expect = 5.8
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = -3
Query: 444 VVVDLSAAALYDVHIFAAYRFSYFNARFHITEFFGYNFTEIDAQTVDNLLSQI 286
VV+ A + V +AAY ++F+ FH+ F ++F D + +L Q+
Sbjct: 714 VVLGAYLAIMTVVFFWAAYETNFFHNIFHVRNFNQHHFKMKDKKVAAHLNEQM 766
>At5g21900.1 68418.m02539 expressed protein
Length = 544
Score = 27.5 bits (58), Expect = 7.7
Identities = 18/60 (30%), Positives = 34/60 (56%)
Frame = +1
Query: 331 KVVTKKFSNMETCVEIGESVRGEDVYIVQSGSGEINDNLMELLIMINACKIASASRVTAV 510
+V+ + F +++ + + +R + Y+V SG GE + LMELLI + +I + + V V
Sbjct: 152 RVLAQNFLAIKSLKLVPDHLRKKLSYLV-SGLGEFDTRLMELLIEDSPSEICAKNCVQLV 210
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,464,049
Number of Sequences: 28952
Number of extensions: 232563
Number of successful extensions: 618
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 605
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 618
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1265787216
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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