Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10b13
         (617 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.            90   6e-20
AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small...    75   1e-15
DQ182015-1|ABA56307.1|  353|Anopheles gambiae G(alpha)q2 protein.      25   2.0  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    25   2.0  
DQ974172-1|ABJ52812.1|  409|Anopheles gambiae serpin 13 protein.       24   4.5  
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         23   6.0  

>EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.
          Length = 213

 Score = 89.8 bits (213), Expect = 6e-20
 Identities = 49/161 (30%), Positives = 83/161 (51%), Gaps = 3/161 (1%)
 Frame = +2

Query: 137 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQE 316
           FK VL+G+   GK++ V R + G+F +   +T+G          +   ++F +WDTAGQE
Sbjct: 25  FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCIDDTTVKFEIWDTAGQE 84

Query: 317 KFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDLVR-VCEGIPIVLCGNKVDIKDR 493
           ++  L   YY   Q AI+++D+ +  ++     W ++L R     I I L GNK D+ + 
Sbjct: 85  RYHSLAPMYYRGAQAAIVVYDIQNSDSFARAKTWVKELQRQASPNIVIALAGNKADLANS 144

Query: 494 KV--KAKTIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKL 610
           +V    +   +     L + + SAK+  N    FL +A+KL
Sbjct: 145 RVVDYEEAKQYADDNRLLFMETSAKTAVNVNDIFLAIAKKL 185


>AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small
           GTPase protein.
          Length = 190

 Score = 75.4 bits (177), Expect = 1e-15
 Identities = 39/118 (33%), Positives = 63/118 (53%), Gaps = 1/118 (0%)
 Frame = +2

Query: 140 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEK 319
           KCV+VGDG  GKT  +  + T  F  +YV T   + +      +   +   +WDTAGQE 
Sbjct: 8   KCVVVGDGTVGKTCMLISYTTDSFPGEYVPT-SFDNYSAPMVVDGVQVSLGLWDTAGQED 66

Query: 320 FGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPN-WHRDLVRVCEGIPIVLCGNKVDIKD 490
           +  LR   Y Q    +I + V S  +++NV + W+ ++   C   PI+L G K+D+++
Sbjct: 67  YDRLRPLSYPQTDVFLICYSVASPSSFENVTSKWYPEIKHHCPDAPIILVGTKIDLRE 124


>DQ182015-1|ABA56307.1|  353|Anopheles gambiae G(alpha)q2 protein.
          Length = 353

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 9/18 (50%), Positives = 15/18 (83%)
 Frame = +2

Query: 140 KCVLVGDGGTGKTTFVKR 193
           K +L+G G +GK+TF+K+
Sbjct: 35  KLLLLGTGESGKSTFIKQ 52


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +2

Query: 290 NVWDTAGQEKFGGLRDGYYI 349
           N+W +A  E FG  R G Y+
Sbjct: 305 NLWPSARVEMFGSFRTGLYL 324


>DQ974172-1|ABJ52812.1|  409|Anopheles gambiae serpin 13 protein.
          Length = 409

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +2

Query: 191 RHLTGEFEKKYVATLGVEVHPLV 259
           RH++G+F + YV TL     PL+
Sbjct: 119 RHMSGDFPRDYVDTLKQLRSPLL 141


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = +2

Query: 245 VHPLVFHTNRGPI 283
           VHPL FH   GPI
Sbjct: 187 VHPLAFHPIGGPI 199


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 680,458
Number of Sequences: 2352
Number of extensions: 15225
Number of successful extensions: 33
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60553008
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)