Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10b10
         (712 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_14973| Best HMM Match : THAP (HMM E-Value=1.9e-05)                  41   9e-04
SB_47920| Best HMM Match : Kelch_1 (HMM E-Value=1.9e-34)               30   2.1  

>SB_14973| Best HMM Match : THAP (HMM E-Value=1.9e-05)
          Length = 317

 Score = 41.1 bits (92), Expect = 9e-04
 Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
 Frame = +1

Query: 496 CAVLGC-DDCKNMDSIMFFRFPEDSSLRQIWTDLTG-RNNWTPTDFSYICIPHFSVDCFK 669
           CAV GC +D +    I F R P++ SLR+ W ++   R ++       +C  HFS D +K
Sbjct: 4   CAVPGCKNDSRKTQGISFHRSPQEPSLRRKWAEIVACRVHFADLPKYCVCSDHFSNDSYK 63


>SB_47920| Best HMM Match : Kelch_1 (HMM E-Value=1.9e-34)
          Length = 405

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -2

Query: 666 ETIYREVWYANIGKICWSPIIS 601
           E ++RE+W  NI   CWS +I+
Sbjct: 50  EKLFRELWRFNIASQCWSRVIT 71


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,713,466
Number of Sequences: 59808
Number of extensions: 350119
Number of successful extensions: 590
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 554
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 590
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1877743452
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)