Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10b09
         (428 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q89T23 Cluster: Blr2227 protein; n=2; Rhizobiales|Rep: ...    33   2.5  
UniRef50_O01519 Cluster: Putative uncharacterized protein F19F10...    32   4.4  
UniRef50_Q6CUY2 Cluster: Kluyveromyces lactis strain NRRL Y-1140...    32   4.4  
UniRef50_A5GNB9 Cluster: Nicotinate-nucleotide adenylyltransfera...    31   7.7  

>UniRef50_Q89T23 Cluster: Blr2227 protein; n=2; Rhizobiales|Rep:
           Blr2227 protein - Bradyrhizobium japonicum
          Length = 428

 Score = 33.1 bits (72), Expect = 2.5
 Identities = 14/37 (37%), Positives = 23/37 (62%)
 Frame = +2

Query: 125 RGVGPRQAVLYQNNHIAALHRIGRQDRVLSLDQGPGR 235
           R + P + VLY++ HI   +RI + +R+L   +GP R
Sbjct: 272 RSIMPTRPVLYESGHITVYYRIDQHNRLLMGGRGPMR 308


>UniRef50_O01519 Cluster: Putative uncharacterized protein F19F10.5;
           n=1; Caenorhabditis elegans|Rep: Putative
           uncharacterized protein F19F10.5 - Caenorhabditis
           elegans
          Length = 314

 Score = 32.3 bits (70), Expect = 4.4
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -3

Query: 405 QILTFGLLFILHFFIARCFFGFIISIF 325
           Q +  G LF+L FFI  CFF  +++ F
Sbjct: 20  QFIVIGYLFLLRFFILICFFKLLLTFF 46


>UniRef50_Q6CUY2 Cluster: Kluyveromyces lactis strain NRRL Y-1140
           chromosome C of strain NRRL Y- 1140 of Kluyveromyces
           lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
           lactis strain NRRL Y-1140 chromosome C of strain NRRL Y-
           1140 of Kluyveromyces lactis - Kluyveromyces lactis
           (Yeast) (Candida sphaerica)
          Length = 295

 Score = 32.3 bits (70), Expect = 4.4
 Identities = 13/28 (46%), Positives = 20/28 (71%)
 Frame = +2

Query: 191 GRQDRVLSLDQGPGRVLEAVAPLGLHPA 274
           G Q+RVL LD+ P ++ +++   GLHPA
Sbjct: 245 GDQERVLDLDEKPVQIFKSLKQQGLHPA 272


>UniRef50_A5GNB9 Cluster: Nicotinate-nucleotide adenylyltransferase;
           n=2; Synechococcus|Rep: Nicotinate-nucleotide
           adenylyltransferase - Synechococcus sp. (strain WH7803)
          Length = 193

 Score = 31.5 bits (68), Expect = 7.7
 Identities = 16/54 (29%), Positives = 29/54 (53%)
 Frame = +2

Query: 59  LPKWFECIRFK**CRIRKVVTIRGVGPRQAVLYQNNHIAALHRIGRQDRVLSLD 220
           +P+W +C ++   C +       G+ PR+    Q +H+  L  +G + R+LSLD
Sbjct: 108 IPRWKDCEQWLGLCEL-------GIVPRKGWPLQADHVQTLEGLGARPRILSLD 154


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 319,524,086
Number of Sequences: 1657284
Number of extensions: 5632639
Number of successful extensions: 15436
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 15146
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15429
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 20653970351
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)