Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10b08
(614 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL022152-2|CAD27434.1| 1142|Homo sapiens melanoma antigen family... 35 0.26
AF064589-1|AAC18837.1| 1142|Homo sapiens melanoma-associated ant... 35 0.26
AF056334-1|AAC24227.1| 1142|Homo sapiens cancer/testis antigen C... 35 0.26
BC130294-1|AAI30295.1| 676|Homo sapiens AMOT protein protein. 34 0.35
AY987378-1|AAY24451.1| 1084|Homo sapiens angiomotin p130 isoform... 34 0.35
AF286598-1|AAG01851.1| 675|Homo sapiens angiomotin protein. 34 0.35
AB028994-1|BAA83023.3| 675|Homo sapiens KIAA1071 protein protein. 34 0.35
X52541-1|CAA36777.1| 543|Homo sapiens protein ( Human mRNA for ... 33 0.61
M62829-1|AAA35815.1| 543|Homo sapiens ETR103 protein. 33 0.61
BC073983-1|AAH73983.1| 543|Homo sapiens early growth response 1... 33 0.61
AJ243425-1|CAB46678.1| 543|Homo sapiens early growth response p... 33 0.61
BC035008-1|AAH35008.1| 652|Homo sapiens gametogenetin protein. 31 4.3
AL607122-5|CAI14974.1| 495|Homo sapiens forkhead box D2 protein. 31 4.3
AK093032-1|BAC04025.1| 652|Homo sapiens protein ( Homo sapiens ... 31 4.3
AF538035-1|AAP31500.1| 652|Homo sapiens gametogenetin protein 1... 31 4.3
Z98884-5|CAI21436.1| 1201|Homo sapiens period homolog 3 (Drosoph... 30 7.5
Z98884-4|CAI21435.1| 1210|Homo sapiens period homolog 3 (Drosoph... 30 7.5
EF015893-1|ABM64204.1| 1201|Homo sapiens period 3 protein. 30 7.5
BC146781-1|AAI46782.1| 1210|Homo sapiens PER3 protein protein. 30 7.5
AY493418-1|AAS72879.1| 1201|Homo sapiens growth-inhibiting prote... 30 7.5
AL157954-1|CAB76084.1| 1201|Homo sapiens hypothetical protein pr... 30 7.5
AF042832-1|AAC15421.1| 497|Homo sapiens forkhead-related transc... 30 7.5
AB047686-1|BAB32925.2| 1233|Homo sapiens period (Drosophila) hom... 30 7.5
AB047534-1|BAB63255.1| 159|Homo sapiens PER3 protein. 30 7.5
AB047533-1|BAB63254.1| 159|Homo sapiens PER3 protein. 30 7.5
AB047532-1|BAB63253.1| 159|Homo sapiens PER3 protein. 30 7.5
AB047531-1|BAB63252.1| 159|Homo sapiens PER3 protein. 30 7.5
AB047530-1|BAB63251.1| 159|Homo sapiens PER3 protein. 30 7.5
>AL022152-2|CAD27434.1| 1142|Homo sapiens melanoma antigen family C, 1
protein.
Length = 1142
Score = 34.7 bits (76), Expect = 0.26
Identities = 33/133 (24%), Positives = 54/133 (40%), Gaps = 8/133 (6%)
Frame = +1
Query: 229 PATAASQKHETAFPSPFAASYPHEETVNKKKQAGAPVQYAYAVPMTTAPNEGTSPYPYAL 408
PA + Q+ ++F S AS + + P Q P+++ P+ +S +
Sbjct: 770 PAQSPLQRPVSSFFSYTLASLLQSSHESPQSPPEGPAQSPLQSPVSSFPSSTSSSLSQSS 829
Query: 409 PVSAFPSQASESL------IPCLDP--AKANIPQYSPFHFFYPQMMSAYTKSMSILKEAG 564
PVS+FPS S SL P P + ++ SPF + YT S L E+
Sbjct: 830 PVSSFPSSTSSSLSKSSPESPLQSPVISFSSSTSLSPFSEESSSPVDEYTSSSDTLLESD 889
Query: 565 VNEDTANSVMPTP 603
D+ + + P
Sbjct: 890 SLTDSESLIESEP 902
>AF064589-1|AAC18837.1| 1142|Homo sapiens melanoma-associated antigen
protein.
Length = 1142
Score = 34.7 bits (76), Expect = 0.26
Identities = 33/133 (24%), Positives = 54/133 (40%), Gaps = 8/133 (6%)
Frame = +1
Query: 229 PATAASQKHETAFPSPFAASYPHEETVNKKKQAGAPVQYAYAVPMTTAPNEGTSPYPYAL 408
PA + Q+ ++F S AS + + P Q P+++ P+ +S +
Sbjct: 770 PAQSPLQRPVSSFFSYTLASLLQSSHESPQSPPEGPAQSPLQSPVSSFPSSTSSSLSQSS 829
Query: 409 PVSAFPSQASESL------IPCLDP--AKANIPQYSPFHFFYPQMMSAYTKSMSILKEAG 564
PVS+FPS S SL P P + ++ SPF + YT S L E+
Sbjct: 830 PVSSFPSSTSSSLSKSSPESPLQSPVISFSSSTSLSPFSEESSSPVDEYTSSSDTLLESD 889
Query: 565 VNEDTANSVMPTP 603
D+ + + P
Sbjct: 890 SLTDSESLIESEP 902
>AF056334-1|AAC24227.1| 1142|Homo sapiens cancer/testis antigen CT7
protein.
Length = 1142
Score = 34.7 bits (76), Expect = 0.26
Identities = 33/133 (24%), Positives = 54/133 (40%), Gaps = 8/133 (6%)
Frame = +1
Query: 229 PATAASQKHETAFPSPFAASYPHEETVNKKKQAGAPVQYAYAVPMTTAPNEGTSPYPYAL 408
PA + Q+ ++F S AS + + P Q P+++ P+ +S +
Sbjct: 770 PAQSPLQRPVSSFFSYTLASLLQSSHESPQSPPEGPAQSPLQSPVSSFPSSTSSSLSQSS 829
Query: 409 PVSAFPSQASESL------IPCLDP--AKANIPQYSPFHFFYPQMMSAYTKSMSILKEAG 564
PVS+FPS S SL P P + ++ SPF + YT S L E+
Sbjct: 830 PVSSFPSSTSSSLSKSSPESPLQSPVISFSSSTSLSPFSEESSSPVDEYTSSSDTLLESD 889
Query: 565 VNEDTANSVMPTP 603
D+ + + P
Sbjct: 890 SLTDSESLIESEP 902
>BC130294-1|AAI30295.1| 676|Homo sapiens AMOT protein protein.
Length = 676
Score = 34.3 bits (75), Expect = 0.35
Identities = 29/88 (32%), Positives = 36/88 (40%)
Frame = +1
Query: 232 ATAASQKHETAFPSPFAASYPHEETVNKKKQAGAPVQYAYAVPMTTAPNEGTSPYPYALP 411
ATAA+ A P AAS V A A VQ A A P AP + P P
Sbjct: 525 ATAAAVSPAAAGQIPAAASVASAAAVAPSAAAAAAVQVAPAAP---APVPAPALVPVPAP 581
Query: 412 VSAFPSQASESLIPCLDPAKANIPQYSP 495
+A S +++ P PA A P +P
Sbjct: 582 AAAQASAPAQTQAPTSAPAVAPTPAPTP 609
>AY987378-1|AAY24451.1| 1084|Homo sapiens angiomotin p130 isoform
protein.
Length = 1084
Score = 34.3 bits (75), Expect = 0.35
Identities = 29/88 (32%), Positives = 36/88 (40%)
Frame = +1
Query: 232 ATAASQKHETAFPSPFAASYPHEETVNKKKQAGAPVQYAYAVPMTTAPNEGTSPYPYALP 411
ATAA+ A P AAS V A A VQ A A P AP + P P
Sbjct: 934 ATAAAVSPAAAGQIPAAASVASAAAVAPSAAAAAAVQVAPAAP---APVPAPALVPVPAP 990
Query: 412 VSAFPSQASESLIPCLDPAKANIPQYSP 495
+A S +++ P PA A P +P
Sbjct: 991 AAAQASAPAQTQAPTSAPAVAPTPAPTP 1018
>AF286598-1|AAG01851.1| 675|Homo sapiens angiomotin protein.
Length = 675
Score = 34.3 bits (75), Expect = 0.35
Identities = 29/88 (32%), Positives = 36/88 (40%)
Frame = +1
Query: 232 ATAASQKHETAFPSPFAASYPHEETVNKKKQAGAPVQYAYAVPMTTAPNEGTSPYPYALP 411
ATAA+ A P AAS V A A VQ A A P AP + P P
Sbjct: 525 ATAAAVSPAAAGQIPAAASVASAAAVAPSAAAAAAVQVAPAAP---APVPAPALVPVPAP 581
Query: 412 VSAFPSQASESLIPCLDPAKANIPQYSP 495
+A S +++ P PA A P +P
Sbjct: 582 AAAQASAPAQTQAPTSAPAVAPTPAPTP 609
>AB028994-1|BAA83023.3| 675|Homo sapiens KIAA1071 protein protein.
Length = 675
Score = 34.3 bits (75), Expect = 0.35
Identities = 29/88 (32%), Positives = 36/88 (40%)
Frame = +1
Query: 232 ATAASQKHETAFPSPFAASYPHEETVNKKKQAGAPVQYAYAVPMTTAPNEGTSPYPYALP 411
ATAA+ A P AAS V A A VQ A A P AP + P P
Sbjct: 525 ATAAAVSPAAAGQIPAAASVASAAAVAPSAAAAAAVQVAPAAP---APVPAPALVPVPAP 581
Query: 412 VSAFPSQASESLIPCLDPAKANIPQYSP 495
+A S +++ P PA A P +P
Sbjct: 582 AAAQASAPAQTQAPTSAPAVAPTPAPTP 609
>X52541-1|CAA36777.1| 543|Homo sapiens protein ( Human mRNA for
early growth response protein 1 (hEGR1). ).
Length = 543
Score = 33.5 bits (73), Expect = 0.61
Identities = 23/70 (32%), Positives = 34/70 (48%)
Frame = +1
Query: 259 TAFPSPFAASYPHEETVNKKKQAGAPVQYAYAVPMTTAPNEGTSPYPYALPVSAFPSQAS 438
+++PSP A SYP V + A Y VP T+ + G+S YP + S FPS +
Sbjct: 440 SSYPSPVATSYP--SPVTTSYPSPATTSYPSPVP-TSFSSPGSSTYPSPVH-SGFPSPSV 495
Query: 439 ESLIPCLDPA 468
+ + PA
Sbjct: 496 ATTYSSVPPA 505
>M62829-1|AAA35815.1| 543|Homo sapiens ETR103 protein.
Length = 543
Score = 33.5 bits (73), Expect = 0.61
Identities = 23/70 (32%), Positives = 34/70 (48%)
Frame = +1
Query: 259 TAFPSPFAASYPHEETVNKKKQAGAPVQYAYAVPMTTAPNEGTSPYPYALPVSAFPSQAS 438
+++PSP A SYP V + A Y VP T+ + G+S YP + S FPS +
Sbjct: 440 SSYPSPVATSYP--SPVTTSYPSPATTSYPSPVP-TSFSSPGSSTYPSPVH-SGFPSPSV 495
Query: 439 ESLIPCLDPA 468
+ + PA
Sbjct: 496 ATTYSSVPPA 505
>BC073983-1|AAH73983.1| 543|Homo sapiens early growth response 1
protein.
Length = 543
Score = 33.5 bits (73), Expect = 0.61
Identities = 23/70 (32%), Positives = 34/70 (48%)
Frame = +1
Query: 259 TAFPSPFAASYPHEETVNKKKQAGAPVQYAYAVPMTTAPNEGTSPYPYALPVSAFPSQAS 438
+++PSP A SYP V + A Y VP T+ + G+S YP + S FPS +
Sbjct: 440 SSYPSPVATSYP--SPVTTSYPSPATTSYPSPVP-TSFSSPGSSTYPSPVH-SGFPSPSV 495
Query: 439 ESLIPCLDPA 468
+ + PA
Sbjct: 496 ATTYSSVPPA 505
>AJ243425-1|CAB46678.1| 543|Homo sapiens early growth response
protein 1 protein.
Length = 543
Score = 33.5 bits (73), Expect = 0.61
Identities = 23/70 (32%), Positives = 34/70 (48%)
Frame = +1
Query: 259 TAFPSPFAASYPHEETVNKKKQAGAPVQYAYAVPMTTAPNEGTSPYPYALPVSAFPSQAS 438
+++PSP A SYP V + A Y VP T+ + G+S YP + S FPS +
Sbjct: 440 SSYPSPVATSYP--SPVTTSYPSPATTSYPSPVP-TSFSSPGSSTYPSPVH-SGFPSPSV 495
Query: 439 ESLIPCLDPA 468
+ + PA
Sbjct: 496 ATTYSSVPPA 505
>BC035008-1|AAH35008.1| 652|Homo sapiens gametogenetin protein.
Length = 652
Score = 30.7 bits (66), Expect = 4.3
Identities = 20/68 (29%), Positives = 29/68 (42%)
Frame = +1
Query: 268 PSPFAASYPHEETVNKKKQAGAPVQYAYAVPMTTAPNEGTSPYPYALPVSAFPSQASESL 447
P+P + P + K+ A AP A A+P A ++ +P P P A PS +
Sbjct: 456 PTPLPVAPPLTPGLGHKESALAPTA-APALPPALAADQAPAPSPAPAPTVAEPSPPVSAP 514
Query: 448 IPCLDPAK 471
P P K
Sbjct: 515 APAAAPIK 522
>AL607122-5|CAI14974.1| 495|Homo sapiens forkhead box D2 protein.
Length = 495
Score = 30.7 bits (66), Expect = 4.3
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Frame = +1
Query: 343 YAYAVPMTTAPNEGTSPYPYALPVSAFPSQASESLIPC---LDPAKANIPQYSP 495
Y A+P AP G +P+P+ P AF A+ + PC + P +A P P
Sbjct: 270 YGLALPAYGAPPPGPAPHPHPHP-HAFAFAAAAAAAPCQLSVPPGRAAAPPPGP 322
>AK093032-1|BAC04025.1| 652|Homo sapiens protein ( Homo sapiens
cDNA FLJ35713 fis, clone TESTI1000019. ).
Length = 652
Score = 30.7 bits (66), Expect = 4.3
Identities = 20/68 (29%), Positives = 29/68 (42%)
Frame = +1
Query: 268 PSPFAASYPHEETVNKKKQAGAPVQYAYAVPMTTAPNEGTSPYPYALPVSAFPSQASESL 447
P+P + P + K+ A AP A A+P A ++ +P P P A PS +
Sbjct: 456 PTPLPVAPPLTPGLGHKESALAPTA-APALPPALAADQAPAPSPAPAPTVAEPSPPVSAP 514
Query: 448 IPCLDPAK 471
P P K
Sbjct: 515 APAAAPIK 522
>AF538035-1|AAP31500.1| 652|Homo sapiens gametogenetin protein 1a
protein.
Length = 652
Score = 30.7 bits (66), Expect = 4.3
Identities = 20/68 (29%), Positives = 29/68 (42%)
Frame = +1
Query: 268 PSPFAASYPHEETVNKKKQAGAPVQYAYAVPMTTAPNEGTSPYPYALPVSAFPSQASESL 447
P+P + P + K+ A AP A A+P A ++ +P P P A PS +
Sbjct: 456 PTPLPVAPPLTPGLGHKESALAPTA-APALPPALAADQAPAPSPAPAPTVAEPSPPVSAP 514
Query: 448 IPCLDPAK 471
P P K
Sbjct: 515 APAAAPIK 522
>Z98884-5|CAI21436.1| 1201|Homo sapiens period homolog 3
(Drosophila) protein.
Length = 1201
Score = 29.9 bits (64), Expect = 7.5
Identities = 20/57 (35%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = +1
Query: 253 HETAFPS-PFAASYPHEETVNKKKQAGAPVQYAYAVPMTTAPNEGTSPYPYALPVSA 420
H+ A P P AAS PH + A P Q Y VP P + YA P +A
Sbjct: 764 HQNAQPCCPSAASSPHTSSPTFPPAAMVPSQAPYLVPAFPLPAATSPGREYAAPGTA 820
>Z98884-4|CAI21435.1| 1210|Homo sapiens period homolog 3
(Drosophila) protein.
Length = 1210
Score = 29.9 bits (64), Expect = 7.5
Identities = 20/57 (35%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = +1
Query: 253 HETAFPS-PFAASYPHEETVNKKKQAGAPVQYAYAVPMTTAPNEGTSPYPYALPVSA 420
H+ A P P AAS PH + A P Q Y VP P + YA P +A
Sbjct: 772 HQNAQPCCPSAASSPHTSSPTFPPAAMVPSQAPYLVPAFPLPAATSPGREYAAPGTA 828
>EF015893-1|ABM64204.1| 1201|Homo sapiens period 3 protein.
Length = 1201
Score = 29.9 bits (64), Expect = 7.5
Identities = 20/57 (35%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = +1
Query: 253 HETAFPS-PFAASYPHEETVNKKKQAGAPVQYAYAVPMTTAPNEGTSPYPYALPVSA 420
H+ A P P AAS PH + A P Q Y VP P + YA P +A
Sbjct: 764 HQNAQPCCPSAASSPHTSSPTFPPAAMVPSQAPYLVPAFPLPAATSPGREYAAPGTA 820
>BC146781-1|AAI46782.1| 1210|Homo sapiens PER3 protein protein.
Length = 1210
Score = 29.9 bits (64), Expect = 7.5
Identities = 20/57 (35%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = +1
Query: 253 HETAFPS-PFAASYPHEETVNKKKQAGAPVQYAYAVPMTTAPNEGTSPYPYALPVSA 420
H+ A P P AAS PH + A P Q Y VP P + YA P +A
Sbjct: 772 HQNAQPCCPSAASSPHTSSPTFPPAAMVPSQAPYLVPAFPLPAATSPGREYAAPGTA 828
>AY493418-1|AAS72879.1| 1201|Homo sapiens growth-inhibiting protein
13 protein.
Length = 1201
Score = 29.9 bits (64), Expect = 7.5
Identities = 20/57 (35%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = +1
Query: 253 HETAFPS-PFAASYPHEETVNKKKQAGAPVQYAYAVPMTTAPNEGTSPYPYALPVSA 420
H+ A P P AAS PH + A P Q Y VP P + YA P +A
Sbjct: 764 HQNAQPCCPSAASSPHTSSPTFPPAAMVPSQAPYLVPAFPLPAATSPGREYAAPGTA 820
>AL157954-1|CAB76084.1| 1201|Homo sapiens hypothetical protein
protein.
Length = 1201
Score = 29.9 bits (64), Expect = 7.5
Identities = 20/57 (35%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = +1
Query: 253 HETAFPS-PFAASYPHEETVNKKKQAGAPVQYAYAVPMTTAPNEGTSPYPYALPVSA 420
H+ A P P AAS PH + A P Q Y VP P + YA P +A
Sbjct: 764 HQNAQPCCPSAASSPHTSSPTFPPAAMVPSQAPYLVPAFPLPAATSPGREYAAPGTA 820
>AF042832-1|AAC15421.1| 497|Homo sapiens forkhead-related
transcription factor FREAC-9 protein.
Length = 497
Score = 29.9 bits (64), Expect = 7.5
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Frame = +1
Query: 343 YAYAVPMTTAPNEGTSPYPYALP-VSAFPSQASESLIPC---LDPAKANIPQYSP 495
Y A+P AP G +P+P+ P AF A+ + PC + P +A P P
Sbjct: 270 YGLALPAYGAPPPGPAPHPHPHPHPHAFAFAAAAAAAPCQLSVPPGRAAAPPPGP 324
>AB047686-1|BAB32925.2| 1233|Homo sapiens period (Drosophila)
homolog 3 hPER3 protein.
Length = 1233
Score = 29.9 bits (64), Expect = 7.5
Identities = 20/57 (35%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = +1
Query: 253 HETAFPS-PFAASYPHEETVNKKKQAGAPVQYAYAVPMTTAPNEGTSPYPYALPVSA 420
H+ A P P AAS PH + A P Q Y VP P + YA P +A
Sbjct: 795 HQNAQPCCPSAASSPHTSSPTFPPAAMVPSQAPYLVPAFPLPAATSPGREYAAPGTA 851
>AB047534-1|BAB63255.1| 159|Homo sapiens PER3 protein.
Length = 159
Score = 29.9 bits (64), Expect = 7.5
Identities = 20/57 (35%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = +1
Query: 253 HETAFPS-PFAASYPHEETVNKKKQAGAPVQYAYAVPMTTAPNEGTSPYPYALPVSA 420
H+ A P P AAS PH + A P Q Y VP P + YA P +A
Sbjct: 41 HQNAQPCCPSAASSPHTSSPTFPPAAMVPSQAPYLVPAFPLPAATSPGREYAAPGTA 97
>AB047533-1|BAB63254.1| 159|Homo sapiens PER3 protein.
Length = 159
Score = 29.9 bits (64), Expect = 7.5
Identities = 20/57 (35%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = +1
Query: 253 HETAFPS-PFAASYPHEETVNKKKQAGAPVQYAYAVPMTTAPNEGTSPYPYALPVSA 420
H+ A P P AAS PH + A P Q Y VP P + YA P +A
Sbjct: 41 HQNAQPCCPSAASSPHTSSPTFPPAAMVPSQAPYLVPAFPLPAATSPGREYAAPGTA 97
>AB047532-1|BAB63253.1| 159|Homo sapiens PER3 protein.
Length = 159
Score = 29.9 bits (64), Expect = 7.5
Identities = 20/57 (35%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = +1
Query: 253 HETAFPS-PFAASYPHEETVNKKKQAGAPVQYAYAVPMTTAPNEGTSPYPYALPVSA 420
H+ A P P AAS PH + A P Q Y VP P + YA P +A
Sbjct: 41 HQNAQPCCPSAASSPHTSSPTFPPAAMVPSQAPYLVPAFPLPAATSPGREYAAPGTA 97
>AB047531-1|BAB63252.1| 159|Homo sapiens PER3 protein.
Length = 159
Score = 29.9 bits (64), Expect = 7.5
Identities = 20/57 (35%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = +1
Query: 253 HETAFPS-PFAASYPHEETVNKKKQAGAPVQYAYAVPMTTAPNEGTSPYPYALPVSA 420
H+ A P P AAS PH + A P Q Y VP P + YA P +A
Sbjct: 41 HQNAQPCCPSAASSPHTSSPTFPPAAMVPSQAPYLVPAFPLPAATSPGREYAAPGTA 97
>AB047530-1|BAB63251.1| 159|Homo sapiens PER3 protein.
Length = 159
Score = 29.9 bits (64), Expect = 7.5
Identities = 20/57 (35%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = +1
Query: 253 HETAFPS-PFAASYPHEETVNKKKQAGAPVQYAYAVPMTTAPNEGTSPYPYALPVSA 420
H+ A P P AAS PH + A P Q Y VP P + YA P +A
Sbjct: 41 HQNAQPCCPSAASSPHTSSPTFPPAAMVPSQAPYLVPAFPLPAATSPGREYAAPGTA 97
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.313 0.127 0.381
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,859,329
Number of Sequences: 237096
Number of extensions: 2169447
Number of successful extensions: 4078
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 3891
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4075
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6579110070
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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