Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10b08
(614 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 34 0.093
AF039717-1|AAK82919.1| 510|Caenorhabditis elegans Abnormal daue... 34 0.093
AF032112-1|AAC47803.1| 510|Caenorhabditis elegans DAF-16 protein. 34 0.093
AF020342-1|AAB84390.1| 510|Caenorhabditis elegans fork head-rel... 34 0.093
Z50028-5|CAA90338.1| 661|Caenorhabditis elegans Hypothetical pr... 32 0.28
AL032624-4|CAA21522.1| 661|Caenorhabditis elegans Hypothetical ... 32 0.28
AL032624-1|CAA21521.1| 209|Caenorhabditis elegans Hypothetical ... 32 0.28
Z82258-4|CAL44968.1| 1467|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z82258-3|CAL44967.1| 1538|Caenorhabditis elegans Hypothetical pr... 30 1.5
AL023835-19|CAL44978.1| 1467|Caenorhabditis elegans Hypothetical... 30 1.5
AL023835-18|CAL44977.1| 1538|Caenorhabditis elegans Hypothetical... 30 1.5
AL132846-3|CAB60346.2| 1648|Caenorhabditis elegans Hypothetical ... 29 2.0
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 29 2.6
AF039717-2|AAK82918.1| 508|Caenorhabditis elegans Abnormal daue... 28 4.6
AF020343-1|AAB84391.1| 508|Caenorhabditis elegans fork head-rel... 28 4.6
Z68302-2|CAA92631.1| 630|Caenorhabditis elegans Hypothetical pr... 28 6.1
Z81586-1|CAB04690.1| 579|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z81495-8|CAB04063.1| 239|Caenorhabditis elegans Hypothetical pr... 27 8.1
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 33.9 bits (74), Expect = 0.093
Identities = 27/88 (30%), Positives = 38/88 (43%), Gaps = 3/88 (3%)
Frame = +1
Query: 232 ATAASQ-KHETAFPSPFAASYPHEETVNKKKQAGAPVQYAYAVPMTTAPNEGTSPYP-YA 405
ATAA + K +T +P A+ + AP A P TAP +PYP A
Sbjct: 2 ATAAEEYKSQTTYPESAPAATTPQPPPPPPPPKPAPYVEQSAQPQQTAPPPPPAPYPQQA 61
Query: 406 LPVSA-FPSQASESLIPCLDPAKANIPQ 486
+P A P+ + +P P A+ PQ
Sbjct: 62 VPAPAPPPAPYPQHAVPAPAPPLASYPQ 89
Score = 27.9 bits (59), Expect = 6.1
Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +1
Query: 229 PATAASQKHETAFPSPFAASYPHEETVNKKKQAGAPVQYAYAVPMTTAPNEGTSPYP-YA 405
P A +H P+P ASYP + V AP +AVP AP +PYP +A
Sbjct: 67 PPPAPYPQHAVPAPAPPLASYP-QNAVPVPAPPPAPYP-QHAVP---APAPPPAPYPQHA 121
Query: 406 LPVSA 420
+P A
Sbjct: 122 VPAPA 126
>AF039717-1|AAK82919.1| 510|Caenorhabditis elegans Abnormal dauer
formation protein16, isoform c protein.
Length = 510
Score = 33.9 bits (74), Expect = 0.093
Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Frame = +1
Query: 124 IKPSVDGSTGDLYVAATEEDGVKSQWLTDASVNFLPATAASQKHETAFPSPFAASYPHEE 303
I + DLY + E+ G ++ S L S H+T+FPS F S ++
Sbjct: 72 IHEQIPEEDADLY-GSNEQCGQLGGASSNGSTAMLHTPDGSNSHQTSFPSDFRMSESPDD 130
Query: 304 TVNKKK---QAGAPVQYAYAVPMTTA 372
TV+ KK + A +YA +TTA
Sbjct: 131 TVSGKKTTTRRNAWGNMSYAELITTA 156
>AF032112-1|AAC47803.1| 510|Caenorhabditis elegans DAF-16 protein.
Length = 510
Score = 33.9 bits (74), Expect = 0.093
Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Frame = +1
Query: 124 IKPSVDGSTGDLYVAATEEDGVKSQWLTDASVNFLPATAASQKHETAFPSPFAASYPHEE 303
I + DLY + E+ G ++ S L S H+T+FPS F S ++
Sbjct: 72 IHEQIPEEDADLY-GSNEQCGQLGGASSNGSTAMLHTPDGSNSHQTSFPSDFRMSESPDD 130
Query: 304 TVNKKK---QAGAPVQYAYAVPMTTA 372
TV+ KK + A +YA +TTA
Sbjct: 131 TVSGKKTTTRRNAWGNMSYAELITTA 156
>AF020342-1|AAB84390.1| 510|Caenorhabditis elegans fork
head-related transcriptionfactor DAF-16a1 protein.
Length = 510
Score = 33.9 bits (74), Expect = 0.093
Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Frame = +1
Query: 124 IKPSVDGSTGDLYVAATEEDGVKSQWLTDASVNFLPATAASQKHETAFPSPFAASYPHEE 303
I + DLY + E+ G ++ S L S H+T+FPS F S ++
Sbjct: 72 IHEQIPEEDADLY-GSNEQCGQLGGASSNGSTAMLHTPDGSNSHQTSFPSDFRMSESPDD 130
Query: 304 TVNKKK---QAGAPVQYAYAVPMTTA 372
TV+ KK + A +YA +TTA
Sbjct: 131 TVSGKKTTTRRNAWGNMSYAELITTA 156
>Z50028-5|CAA90338.1| 661|Caenorhabditis elegans Hypothetical
protein F46F6.1a protein.
Length = 661
Score = 32.3 bits (70), Expect = 0.28
Identities = 16/69 (23%), Positives = 25/69 (36%)
Frame = +1
Query: 292 PHEETVNKKKQAGAPVQYAYAVPMTTAPNEGTSPYPYALPVSAFPSQASESLIPCLDPAK 471
P E N +K + +A P T+P P P P P S + + P+
Sbjct: 518 PSELATNNRKSPSGAIGNVFADPFATSPEGSAPPLPSRPPPPLHPRMIPGSSVQSISPSG 577
Query: 472 ANIPQYSPF 498
++ P F
Sbjct: 578 SSAPHLLHF 586
>AL032624-4|CAA21522.1| 661|Caenorhabditis elegans Hypothetical
protein F46F6.1a protein.
Length = 661
Score = 32.3 bits (70), Expect = 0.28
Identities = 16/69 (23%), Positives = 25/69 (36%)
Frame = +1
Query: 292 PHEETVNKKKQAGAPVQYAYAVPMTTAPNEGTSPYPYALPVSAFPSQASESLIPCLDPAK 471
P E N +K + +A P T+P P P P P S + + P+
Sbjct: 518 PSELATNNRKSPSGAIGNVFADPFATSPEGSAPPLPSRPPPPLHPRMIPGSSVQSISPSG 577
Query: 472 ANIPQYSPF 498
++ P F
Sbjct: 578 SSAPHLLHF 586
>AL032624-1|CAA21521.1| 209|Caenorhabditis elegans Hypothetical
protein F46F6.1b protein.
Length = 209
Score = 32.3 bits (70), Expect = 0.28
Identities = 16/69 (23%), Positives = 25/69 (36%)
Frame = +1
Query: 292 PHEETVNKKKQAGAPVQYAYAVPMTTAPNEGTSPYPYALPVSAFPSQASESLIPCLDPAK 471
P E N +K + +A P T+P P P P P S + + P+
Sbjct: 66 PSELATNNRKSPSGAIGNVFADPFATSPEGSAPPLPSRPPPPLHPRMIPGSSVQSISPSG 125
Query: 472 ANIPQYSPF 498
++ P F
Sbjct: 126 SSAPHLLHF 134
>Z82258-4|CAL44968.1| 1467|Caenorhabditis elegans Hypothetical protein
Y37A1B.17b protein.
Length = 1467
Score = 29.9 bits (64), Expect = 1.5
Identities = 24/103 (23%), Positives = 44/103 (42%)
Frame = +1
Query: 304 TVNKKKQAGAPVQYAYAVPMTTAPNEGTSPYPYALPVSAFPSQASESLIPCLDPAKANIP 483
++N+K+ A A Q P T+ + SP P + + P A +++ P L+ A P
Sbjct: 1325 SMNQKRSASAAAQPTNVWPTTSMMSRSDSPQPL---IPSRPEPAVKNVYPSLNDGSARAP 1381
Query: 484 QYSPFHFFYPQMMSAYTKSMSILKEAGVNEDTANSVMPTPPMW 612
++ +P + S+ + V DT + PPM+
Sbjct: 1382 TFAT---TFPSQ-----ANQSLPMYSAVPNDTMSMNYAMPPMY 1416
>Z82258-3|CAL44967.1| 1538|Caenorhabditis elegans Hypothetical protein
Y37A1B.17a protein.
Length = 1538
Score = 29.9 bits (64), Expect = 1.5
Identities = 24/103 (23%), Positives = 44/103 (42%)
Frame = +1
Query: 304 TVNKKKQAGAPVQYAYAVPMTTAPNEGTSPYPYALPVSAFPSQASESLIPCLDPAKANIP 483
++N+K+ A A Q P T+ + SP P + + P A +++ P L+ A P
Sbjct: 1325 SMNQKRSASAAAQPTNVWPTTSMMSRSDSPQPL---IPSRPEPAVKNVYPSLNDGSARAP 1381
Query: 484 QYSPFHFFYPQMMSAYTKSMSILKEAGVNEDTANSVMPTPPMW 612
++ +P + S+ + V DT + PPM+
Sbjct: 1382 TFAT---TFPSQ-----ANQSLPMYSAVPNDTMSMNYAMPPMY 1416
>AL023835-19|CAL44978.1| 1467|Caenorhabditis elegans Hypothetical
protein Y37A1B.17b protein.
Length = 1467
Score = 29.9 bits (64), Expect = 1.5
Identities = 24/103 (23%), Positives = 44/103 (42%)
Frame = +1
Query: 304 TVNKKKQAGAPVQYAYAVPMTTAPNEGTSPYPYALPVSAFPSQASESLIPCLDPAKANIP 483
++N+K+ A A Q P T+ + SP P + + P A +++ P L+ A P
Sbjct: 1325 SMNQKRSASAAAQPTNVWPTTSMMSRSDSPQPL---IPSRPEPAVKNVYPSLNDGSARAP 1381
Query: 484 QYSPFHFFYPQMMSAYTKSMSILKEAGVNEDTANSVMPTPPMW 612
++ +P + S+ + V DT + PPM+
Sbjct: 1382 TFAT---TFPSQ-----ANQSLPMYSAVPNDTMSMNYAMPPMY 1416
>AL023835-18|CAL44977.1| 1538|Caenorhabditis elegans Hypothetical
protein Y37A1B.17a protein.
Length = 1538
Score = 29.9 bits (64), Expect = 1.5
Identities = 24/103 (23%), Positives = 44/103 (42%)
Frame = +1
Query: 304 TVNKKKQAGAPVQYAYAVPMTTAPNEGTSPYPYALPVSAFPSQASESLIPCLDPAKANIP 483
++N+K+ A A Q P T+ + SP P + + P A +++ P L+ A P
Sbjct: 1325 SMNQKRSASAAAQPTNVWPTTSMMSRSDSPQPL---IPSRPEPAVKNVYPSLNDGSARAP 1381
Query: 484 QYSPFHFFYPQMMSAYTKSMSILKEAGVNEDTANSVMPTPPMW 612
++ +P + S+ + V DT + PPM+
Sbjct: 1382 TFAT---TFPSQ-----ANQSLPMYSAVPNDTMSMNYAMPPMY 1416
>AL132846-3|CAB60346.2| 1648|Caenorhabditis elegans Hypothetical
protein Y43D4A.5 protein.
Length = 1648
Score = 29.5 bits (63), Expect = 2.0
Identities = 35/111 (31%), Positives = 46/111 (41%), Gaps = 17/111 (15%)
Frame = +1
Query: 214 SVNFLPA---TAASQKHETAFPSPFAASYPHEETVNKKKQAGAPVQYAYAVPMTTAPNEG 384
SV F P A+ + + PS P E T + PV A+ VPMT+ P
Sbjct: 345 SVPFQPVRQKVASPWRRKLQIPSESNEVDPFETTTSSP----IPVTSAH-VPMTSPPEMM 399
Query: 385 TSPYP---------YALPVSAFPSQASE-SLIPCLD----PAKANIPQYSP 495
TSP P + LP S+F S S +P + P + IP YSP
Sbjct: 400 TSPAPMTSSTSVPQHILPTSSFVSSGSNPDALPATNLFRYPDQVKIPFYSP 450
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 29.1 bits (62), Expect = 2.6
Identities = 28/127 (22%), Positives = 46/127 (36%)
Frame = +1
Query: 106 PVHGLYIKPSVDGSTGDLYVAATEEDGVKSQWLTDASVNFLPATAASQKHETAFPSPFAA 285
P L + P + + + TE S + +P A PSP A+
Sbjct: 368 PPRTLPVAPGDPSESTFVQIHETETPSAPSPASPSSVSVTIPRVALPASVSVPSPSP-AS 426
Query: 286 SYPHEETVNKKKQAGAPVQYAYAVPMTTAPNEGTSPYPYALPVSAFPSQASESLIPCLDP 465
+ P T+ A +P Y A + +P P +P S+ PSQ ++ P
Sbjct: 427 NVP--VTITLSAPAKSPATYGPAPEPSRPAVPPVAPAPSVIPTSSQPSQPKQTQPAQPTP 484
Query: 466 AKANIPQ 486
+ IP+
Sbjct: 485 SAPKIPE 491
>AF039717-2|AAK82918.1| 508|Caenorhabditis elegans Abnormal dauer
formation protein16, isoform b protein.
Length = 508
Score = 28.3 bits (60), Expect = 4.6
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Frame = +1
Query: 124 IKPSVDGSTGDLYVAATEEDGVKSQWLTDASVNFLPATAASQKHETAFPSPFAASYPHEE 303
I + DLY + E+ G ++ S L S H+T+FPS + S ++
Sbjct: 72 IHEQIPEEDADLY-GSNEQCGQLGGASSNGSTAMLHTPDGSNSHQTSFPSEMSES--PDD 128
Query: 304 TVNKKK---QAGAPVQYAYAVPMTTA 372
TV+ KK + A +YA +TTA
Sbjct: 129 TVSGKKTTTRRNAWGNMSYAELITTA 154
>AF020343-1|AAB84391.1| 508|Caenorhabditis elegans fork
head-related transcriptionfactor DAF-16a2 protein.
Length = 508
Score = 28.3 bits (60), Expect = 4.6
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Frame = +1
Query: 124 IKPSVDGSTGDLYVAATEEDGVKSQWLTDASVNFLPATAASQKHETAFPSPFAASYPHEE 303
I + DLY + E+ G ++ S L S H+T+FPS + S ++
Sbjct: 72 IHEQIPEEDADLY-GSNEQCGQLGGASSNGSTAMLHTPDGSNSHQTSFPSEMSES--PDD 128
Query: 304 TVNKKK---QAGAPVQYAYAVPMTTA 372
TV+ KK + A +YA +TTA
Sbjct: 129 TVSGKKTTTRRNAWGNMSYAELITTA 154
>Z68302-2|CAA92631.1| 630|Caenorhabditis elegans Hypothetical
protein ZK792.5 protein.
Length = 630
Score = 27.9 bits (59), Expect = 6.1
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = -1
Query: 566 TPASFKMLIDFVYADIIWG*KK*NGEYWGMFALAGSKHGIKLSDACDGNA 417
+P + DF+ AD +WG K+ + W ++ GS+ KL + C +A
Sbjct: 324 SPIFVTLFQDFIEADGLWGDKRGISKAW--YSSNGSRVWDKLMETCSEDA 371
>Z81586-1|CAB04690.1| 579|Caenorhabditis elegans Hypothetical
protein T05F1.2 protein.
Length = 579
Score = 27.5 bits (58), Expect = 8.1
Identities = 15/57 (26%), Positives = 27/57 (47%)
Frame = -3
Query: 216 GCIGQPLRFDSIFFCRGNVKVSRRSVDRRLDIESMYWMELIRVVSLSHVTLNTRVNH 46
GCI + ++ S F + + + +LDI+ YW +L + H+ N R+ H
Sbjct: 206 GCIHETAQYLSQF-----INIHDANFVEKLDIDVKYWSQLFSIEKFRHIR-NLRIVH 256
>Z81495-8|CAB04063.1| 239|Caenorhabditis elegans Hypothetical
protein F08G2.8 protein.
Length = 239
Score = 27.5 bits (58), Expect = 8.1
Identities = 15/55 (27%), Positives = 24/55 (43%), Gaps = 7/55 (12%)
Frame = +1
Query: 358 PMTTAPNEGTSPYPYALPVSAFPSQASESLIPCLD-------PAKANIPQYSPFH 501
P+T P E T P + FPS + P D P + ++P ++PF+
Sbjct: 176 PVTVPPQEITQPQSSFTALEIFPSYLPQDKWPQFDQRWMNPQPTQFSVPSFTPFY 230
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.313 0.127 0.381
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,118,194
Number of Sequences: 27780
Number of extensions: 342485
Number of successful extensions: 872
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 829
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 872
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1332243108
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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