Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10a21
         (616 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    23   2.4  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   7.2  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   7.2  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   7.2  
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    21   9.6  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    21   9.6  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    21   9.6  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    21   9.6  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   9.6  

>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 12/48 (25%), Positives = 20/48 (41%)
 Frame = -3

Query: 488 SERTEEDADPQPRHQEPRGQKRYLFEHCS*NAVY*SCQTHTAIRNASN 345
           S  + E++  +        +KR   EHC     Y +   HT I N+ +
Sbjct: 756 SSTSSEESREEKATTSLEAEKREKSEHCEKGKEYYAASFHTDIGNSQS 803


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -1

Query: 361 YVMLVITIIVCILFV 317
           Y++L IT+I  ++FV
Sbjct: 51  YIVLPITVIYAVIFV 65


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 15/71 (21%), Positives = 28/71 (39%)
 Frame = +3

Query: 156 KVKTVSAQTHRRLLQV*RMWDYRNNQIKTRNTCG*CGVRNCTLIEALVNGEAAATNKIQT 335
           K+  +  Q  + + +   M D    Q  +  T        C L    +  ++A T  +QT
Sbjct: 759 KIYIILFQPDKNIRRKVTMGDKSKKQGSSAGTSSITKYTGCELTSESMPLQSALTAAVQT 818

Query: 336 IIVITSITYCS 368
            + +T I+  S
Sbjct: 819 SVGVTEISLAS 829


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
            receptor protein.
          Length = 933

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 15/71 (21%), Positives = 28/71 (39%)
 Frame = +3

Query: 156  KVKTVSAQTHRRLLQV*RMWDYRNNQIKTRNTCG*CGVRNCTLIEALVNGEAAATNKIQT 335
            K+  +  Q  + + +   M D    Q  +  T        C L    +  ++A T  +QT
Sbjct: 849  KIYIILFQPDKNIRRKVTMGDKSKKQGSSAGTSSITKYTGCELTSESMPLQSALTAAVQT 908

Query: 336  IIVITSITYCS 368
             + +T I+  S
Sbjct: 909  SVGVTEISLAS 919


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = -1

Query: 505 HTTKNTANGLKRTQTPSHAIR 443
           HTT N      R + P H IR
Sbjct: 437 HTTTNGCTAELRKKEPPHPIR 457


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = -1

Query: 505 HTTKNTANGLKRTQTPSHAIR 443
           HTT N      R + P H IR
Sbjct: 423 HTTTNGCTAELRKKEPPHPIR 443


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = -1

Query: 505 HTTKNTANGLKRTQTPSHAIR 443
           HTT N      R + P H IR
Sbjct: 457 HTTTNGCTAELRKKEPPHPIR 477


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = -1

Query: 505 HTTKNTANGLKRTQTPSHAIR 443
           HTT N      R + P H IR
Sbjct: 406 HTTTNGCTAELRKKEPPHPIR 426


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/25 (28%), Positives = 13/25 (52%)
 Frame = -3

Query: 503 HHEEYSERTEEDADPQPRHQEPRGQ 429
           HH+    + +  A PQ + Q+ + Q
Sbjct: 816 HHQSTHPQAQAQAQPQQQQQQQQQQ 840


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,837
Number of Sequences: 438
Number of extensions: 3398
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18215697
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)