Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10a20
(689 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024814-2|AAK68521.2| 259|Caenorhabditis elegans Hypothetical ... 274 4e-74
AC025726-7|AAK73916.2| 272|Caenorhabditis elegans Hypothetical ... 202 2e-52
Z77131-7|CAB00857.2| 1034|Caenorhabditis elegans Hypothetical pr... 178 3e-45
Z46381-11|CAA86520.2| 1034|Caenorhabditis elegans Hypothetical p... 178 3e-45
Z81078-3|CAB03077.3| 1388|Caenorhabditis elegans Hypothetical pr... 30 1.4
U40419-9|AAA81429.2| 1715|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z92834-6|CAB07391.1| 312|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z92830-2|CAB07355.2| 330|Caenorhabditis elegans Hypothetical pr... 27 9.6
>AC024814-2|AAK68521.2| 259|Caenorhabditis elegans Hypothetical
protein Y54F10AR.1 protein.
Length = 259
Score = 274 bits (672), Expect = 4e-74
Identities = 127/196 (64%), Positives = 154/196 (78%), Gaps = 2/196 (1%)
Frame = +2
Query: 107 LTVEEYQVAQLYCVAEVSKNETGGGEGIEVIKNEPFKDYPLLGGKYSSGQYTYKIYHLAS 286
++VEEYQV QL+ VAE SK ETGGGEG+EV+KNEPF + PLL G+++ GQYT+KIYHL S
Sbjct: 1 MSVEEYQVGQLWSVAEASKAETGGGEGVEVLKNEPFDNVPLLNGQFTKGQYTHKIYHLQS 60
Query: 287 KVPAFIRLLAPKGSLEVHEEAWNAYPYCRTVLTNPGYMKENFVICIESLHLPDAGDQYNV 466
KVPA +R +APKGSL +HEEAWNAYPYC+TV+TNP YMKENF + IE++HLPD G N
Sbjct: 61 KVPAILRKIAPKGSLAIHEEAWNAYPYCKTVVTNPDYMKENFYVKIETIHLPDNGTTENA 120
Query: 467 HELPPEKLKTREVVPIDIANDP--LPSADYKSETDPTKFKSTKTGRGPLVGPNWKNDVKP 640
H L ++L REVV I+IAND L S D ++ P+KF+STKTGRGPL G NWK+ V+P
Sbjct: 121 HGLKGDELAKREVVNINIANDHEYLNSGDLHPDSTPSKFQSTKTGRGPLSG-NWKDSVQP 179
Query: 641 VMTCYKLVTAEFKWFG 688
VM YKLVT FKWFG
Sbjct: 180 VMCAYKLVTVYFKWFG 195
>AC025726-7|AAK73916.2| 272|Caenorhabditis elegans Hypothetical
protein Y71G12B.17 protein.
Length = 272
Score = 202 bits (492), Expect = 2e-52
Identities = 103/206 (50%), Positives = 134/206 (65%), Gaps = 1/206 (0%)
Frame = +2
Query: 74 MIIKEYRVTLPLTVEEYQVAQLYCVAEVSKNETGGGEGIEVIKNEPFKDYPLLGGKYSSG 253
MI+KEYR+ LPLTV+E++ LY V+ S+NETGGGEG+E + E F L G+ SG
Sbjct: 1 MIVKEYRIPLPLTVDEFERGLLYAVSACSRNETGGGEGVEFLVQEDFTSNTLRPGQTVSG 60
Query: 254 QYTYKIYHLASKVPAFIRLLAPKGSLEVHEEAWNAYPYCRTVLTNPGYMKENFVICIESL 433
YT KIY L SK P ++ L P + ++EE+WNAYPYC+TVLTNPGYMK+NF IE++
Sbjct: 61 TYTKKIYRLRSKAPWVLQKLLPPEAFVIYEESWNAYPYCKTVLTNPGYMKDNFHQIIETI 120
Query: 434 HLPDAGDQYNVHELPPEKLKTREVVPIDIA-NDPLPSADYKSETDPTKFKSTKTGRGPLV 610
HL D G N + PEK RE+V IDIA ND + +Y+ E D F++ RGPL
Sbjct: 121 HLDDNGSSENPLD-GPEK---REIVFIDIADNDIFGTKNYEKEKDARLFEAETVERGPL- 175
Query: 611 GPNWKNDVKPVMTCYKLVTAEFKWFG 688
+W ++ PVM CYKLV+ FKW G
Sbjct: 176 DEDWIDEHDPVMCCYKLVSCHFKWTG 201
>Z77131-7|CAB00857.2| 1034|Caenorhabditis elegans Hypothetical
protein M01F1.7 protein.
Length = 1034
Score = 178 bits (434), Expect = 3e-45
Identities = 91/210 (43%), Positives = 135/210 (64%), Gaps = 5/210 (2%)
Frame = +2
Query: 74 MIIKEYRVTLPLTVEEYQVAQLYCVAEVSKNETGGGE-GIEVIKNEPFKDYPLLGGKYSS 250
M+IKEYR+ LP+TV+EY++AQLY + + S+ ++ G + G+E+I N+P+ D P GG S
Sbjct: 1 MLIKEYRILLPMTVQEYRIAQLYMIQKKSRLDSHGQDSGVEIISNKPYTDGP--GG---S 55
Query: 251 GQYTYKIYHLASKVPAFIRLLAPKGSLEVHEEAWNAYPYCRTVLTNPGYMKENFVICIES 430
GQYT+KIYH+ S++PA+IR + P +LE HEE+WNAYP +T + P M + F + +E+
Sbjct: 56 GQYTFKIYHIGSRIPAWIRTVLPTNALEAHEESWNAYPVTKTRYSTP--MMDRFSLEVET 113
Query: 431 LHLPDAGDQYNVHELPPEKLKTREVVPIDIANDPLPSADYKSETDPTKFKSTKTGRGPL- 607
L+ D G Q NV L + TR + +D DP+ S DY +E DP ++S T RGPL
Sbjct: 114 LYFDDHGQQENVFNLNEKDKSTRIIDYMDFVKDPISSHDYCAEEDPKLYRSETTNRGPLN 173
Query: 608 ---VGPNWKNDVKPVMTCYKLVTAEFKWFG 688
V + K + P+M YKL EF+++G
Sbjct: 174 DDWVAEHLKKGL-PIMCAYKLCKVEFRYWG 202
>Z46381-11|CAA86520.2| 1034|Caenorhabditis elegans Hypothetical
protein M01F1.7 protein.
Length = 1034
Score = 178 bits (434), Expect = 3e-45
Identities = 91/210 (43%), Positives = 135/210 (64%), Gaps = 5/210 (2%)
Frame = +2
Query: 74 MIIKEYRVTLPLTVEEYQVAQLYCVAEVSKNETGGGE-GIEVIKNEPFKDYPLLGGKYSS 250
M+IKEYR+ LP+TV+EY++AQLY + + S+ ++ G + G+E+I N+P+ D P GG S
Sbjct: 1 MLIKEYRILLPMTVQEYRIAQLYMIQKKSRLDSHGQDSGVEIISNKPYTDGP--GG---S 55
Query: 251 GQYTYKIYHLASKVPAFIRLLAPKGSLEVHEEAWNAYPYCRTVLTNPGYMKENFVICIES 430
GQYT+KIYH+ S++PA+IR + P +LE HEE+WNAYP +T + P M + F + +E+
Sbjct: 56 GQYTFKIYHIGSRIPAWIRTVLPTNALEAHEESWNAYPVTKTRYSTP--MMDRFSLEVET 113
Query: 431 LHLPDAGDQYNVHELPPEKLKTREVVPIDIANDPLPSADYKSETDPTKFKSTKTGRGPL- 607
L+ D G Q NV L + TR + +D DP+ S DY +E DP ++S T RGPL
Sbjct: 114 LYFDDHGQQENVFNLNEKDKSTRIIDYMDFVKDPISSHDYCAEEDPKLYRSETTNRGPLN 173
Query: 608 ---VGPNWKNDVKPVMTCYKLVTAEFKWFG 688
V + K + P+M YKL EF+++G
Sbjct: 174 DDWVAEHLKKGL-PIMCAYKLCKVEFRYWG 202
>Z81078-3|CAB03077.3| 1388|Caenorhabditis elegans Hypothetical protein
F36H2.3 protein.
Length = 1388
Score = 30.3 bits (65), Expect = 1.4
Identities = 31/103 (30%), Positives = 41/103 (39%), Gaps = 6/103 (5%)
Frame = -1
Query: 551 CSRPTGGGRSQCL---WGPPRGSLVS--QAAARGHCIGRRRPVNAAILYI*RSFLSCNRD 387
CS T G+S CL W P + S A CIG P NA + Y D
Sbjct: 1153 CSNGTQIGQSTCLVGQWTPAITATCSGSSTAVGSQCIGVIVPTNAQVTY---------SD 1203
Query: 386 SSALFYSTGRRSTLLRVLREILS-EQVA**RPELWTPNGRSCT 261
S + +S G +TL + L+ + +WTP SCT
Sbjct: 1204 GSMVLHSAGTTATLTCLNSATLTGSSYSSCSNGVWTPTLGSCT 1246
>U40419-9|AAA81429.2| 1715|Caenorhabditis elegans Hypothetical
protein C27F2.8 protein.
Length = 1715
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/47 (27%), Positives = 24/47 (51%)
Frame = +1
Query: 529 PPPVGRLQIGDRPDQVQVYEDRPRTARRAKLEERRETGHDVLQARHG 669
PP G + +G + D V+VY + R + + + +GH + +R G
Sbjct: 286 PPTKGSVTLGPKADLVKVYLEGNRVQMSPQQQMKHISGHIIAVSRGG 332
>Z92834-6|CAB07391.1| 312|Caenorhabditis elegans Hypothetical
protein F39B2.11 protein.
Length = 312
Score = 27.5 bits (58), Expect = 9.6
Identities = 16/59 (27%), Positives = 29/59 (49%)
Frame = +2
Query: 257 YTYKIYHLASKVPAFIRLLAPKGSLEVHEEAWNAYPYCRTVLTNPGYMKENFVICIESL 433
+ Y +Y+L + +RLLA K E+ +EA+ A T L + + N +++L
Sbjct: 133 FPYNLYYLEKRRKKALRLLAGKNDTEILKEAFMALNTLSTKLGDNKFFCGNKPTSLDAL 191
>Z92830-2|CAB07355.2| 330|Caenorhabditis elegans Hypothetical
protein F11A5.2 protein.
Length = 330
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +2
Query: 77 IIKEYRVTLPLTVEEYQVAQLYCVAEVS 160
I+KE+ V PL+ + Y V+ L+C+ VS
Sbjct: 84 ILKEFNV--PLSFQSYMVSTLFCMVAVS 109
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,938,369
Number of Sequences: 27780
Number of extensions: 357336
Number of successful extensions: 1011
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 949
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 999
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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