Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10a18
(632 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 32 0.005
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 32 0.005
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 28 0.087
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 25 0.61
AB252421-1|BAE80739.1| 122|Apis mellifera GB15078 protein. 24 1.1
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 31.9 bits (69), Expect = 0.005
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +3
Query: 564 PGTTIELTCEAAGSPAPSVHW 626
PG + L C AAG+P P V W
Sbjct: 435 PGPAVSLKCSAAGNPTPQVTW 455
Score = 25.8 bits (54), Expect = 0.35
Identities = 9/28 (32%), Positives = 12/28 (42%)
Frame = +3
Query: 543 LPSYAHTPGTTIELTCEAAGSPAPSVHW 626
+P G T+ L C AG P + W
Sbjct: 525 IPKVTAVAGETLRLKCPVAGYPIEEIKW 552
Score = 24.2 bits (50), Expect = 1.1
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +3
Query: 576 IELTCEAAGSPAPSVHWFK 632
+ L C+A G P P++ W K
Sbjct: 727 VALHCQAQGVPTPTIVWKK 745
Score = 22.2 bits (45), Expect = 4.3
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 8/50 (16%)
Frame = +3
Query: 501 SDGSHKYLSITQGPLPSYAHTPGTTIE--------LTCEAAGSPAPSVHW 626
S G H + + +GP S+ P + +E L C A GSP ++ W
Sbjct: 17 SAGGHGFDAHLRGP--SFVMEPPSRVEFSNSSGAWLDCTATGSPPLNIDW 64
Score = 21.4 bits (43), Expect = 7.5
Identities = 9/22 (40%), Positives = 10/22 (45%)
Frame = +3
Query: 567 GTTIELTCEAAGSPAPSVHWFK 632
G T L CE G +V W K
Sbjct: 822 GDTATLHCEVHGDTPVTVTWLK 843
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 31.9 bits (69), Expect = 0.005
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +3
Query: 564 PGTTIELTCEAAGSPAPSVHW 626
PG + L C AAG+P P V W
Sbjct: 435 PGPAVSLKCSAAGNPTPQVTW 455
Score = 25.8 bits (54), Expect = 0.35
Identities = 9/28 (32%), Positives = 12/28 (42%)
Frame = +3
Query: 543 LPSYAHTPGTTIELTCEAAGSPAPSVHW 626
+P G T+ L C AG P + W
Sbjct: 525 IPKVTAVAGETLRLKCPVAGYPIEEIKW 552
Score = 24.2 bits (50), Expect = 1.1
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +3
Query: 576 IELTCEAAGSPAPSVHWFK 632
+ L C+A G P P++ W K
Sbjct: 723 VALHCQAQGVPTPTIVWKK 741
Score = 22.2 bits (45), Expect = 4.3
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 8/50 (16%)
Frame = +3
Query: 501 SDGSHKYLSITQGPLPSYAHTPGTTIE--------LTCEAAGSPAPSVHW 626
S G H + + +GP S+ P + +E L C A GSP ++ W
Sbjct: 17 SAGGHGFDAHLRGP--SFVMEPPSRVEFSNSSGAWLDCTATGSPPLNIDW 64
Score = 21.4 bits (43), Expect = 7.5
Identities = 9/22 (40%), Positives = 10/22 (45%)
Frame = +3
Query: 567 GTTIELTCEAAGSPAPSVHWFK 632
G T L CE G +V W K
Sbjct: 818 GDTATLHCEVHGDTPVTVTWLK 839
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 27.9 bits (59), Expect = 0.087
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +3
Query: 564 PGTTIELTCEAAGSPAPSVHW 626
PG ++ L C A+G+P P + W
Sbjct: 407 PGPSMFLKCVASGNPTPEITW 427
Score = 25.0 bits (52), Expect = 0.61
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +3
Query: 567 GTTIELTCEAAGSPAPSVHWFK 632
GT + C+A G+P P + W +
Sbjct: 18 GTGAVVECQARGNPQPDIIWVR 39
Score = 25.0 bits (52), Expect = 0.61
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +3
Query: 576 IELTCEAAGSPAPSVHW 626
++L C A G PAP V W
Sbjct: 1294 VKLPCLAVGVPAPEVTW 1310
Score = 24.6 bits (51), Expect = 0.81
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +3
Query: 555 AHTPGTTIELTCEAAGSPAPSVHWFK 632
A G+ + C+A G P P V W K
Sbjct: 689 AFAQGSDARVECKADGFPKPQVTWKK 714
Score = 23.0 bits (47), Expect = 2.5
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = +3
Query: 576 IELTCEAAGSPAPSVHWFK 632
+ L C A G P P W+K
Sbjct: 230 LPLLCPAQGFPVPVHRWYK 248
Score = 23.0 bits (47), Expect = 2.5
Identities = 8/22 (36%), Positives = 10/22 (45%)
Frame = +3
Query: 567 GTTIELTCEAAGSPAPSVHWFK 632
G TC G+P +V W K
Sbjct: 322 GRPATFTCNVRGNPIKTVSWLK 343
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 25.0 bits (52), Expect = 0.61
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = +3
Query: 582 LTCEAAGSPAPSVHWFK 632
+ C AG P P V W K
Sbjct: 421 IRCHVAGEPLPRVQWLK 437
>AB252421-1|BAE80739.1| 122|Apis mellifera GB15078 protein.
Length = 122
Score = 24.2 bits (50), Expect = 1.1
Identities = 9/22 (40%), Positives = 10/22 (45%)
Frame = +3
Query: 567 GTTIELTCEAAGSPAPSVHWFK 632
G I C A G P P + W K
Sbjct: 37 GRKITFFCMATGFPRPEITWLK 58
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,401
Number of Sequences: 438
Number of extensions: 3812
Number of successful extensions: 18
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18949215
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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