Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10a14
(627 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 25 0.60
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 23 2.4
AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase prot... 23 2.4
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 23 3.2
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 22 5.6
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 5.6
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 22 5.6
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 21 7.4
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 21 7.4
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 21 7.4
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 21 7.4
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 21 7.4
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 21 7.4
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 21 7.4
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 21 7.4
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 25.0 bits (52), Expect = 0.60
Identities = 18/78 (23%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Frame = -3
Query: 544 QRFSSKGDKLQLPFIQVTLYSFRRETFRKKEPSLEVTPRPAVFSLYLFLALNHNFVTN-- 371
+R+S ++ Q + Y RET KE S + T R + +L++N+++N
Sbjct: 275 KRYSRSREREQKSYKNENSYRKYRET--SKERSRDKTERERSKERKIISSLSNNYISNIS 332
Query: 370 SFHLNLLWGEILHIQVNF 317
+++ N + + L+ +N+
Sbjct: 333 NYNNNNNYNKKLYYNINY 350
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 23.0 bits (47), Expect = 2.4
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +3
Query: 180 SPSSPGTLSSAIRSSTSGKPP 242
SPS ++SA SSTS PP
Sbjct: 510 SPSPNPRIASAPSSSTSSSPP 530
>AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase
protein.
Length = 693
Score = 23.0 bits (47), Expect = 2.4
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -3
Query: 583 VYRFLLNWHRPLLQRFSSKGDKL 515
V RF+ NWH P+ + + K D L
Sbjct: 257 VKRFI-NWHEPIPEAYFPKLDSL 278
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 22.6 bits (46), Expect = 3.2
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +2
Query: 332 VQNFTPEQIQVKTVGNEIMIEGKKEIKREDGWTRSH 439
V+N+T + QV + GN +E +KR G+ H
Sbjct: 215 VKNYTADCTQVYSTGNFTCLEVVFVLKRRLGYYLFH 250
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 21.8 bits (44), Expect = 5.6
Identities = 13/63 (20%), Positives = 27/63 (42%)
Frame = -3
Query: 544 QRFSSKGDKLQLPFIQVTLYSFRRETFRKKEPSLEVTPRPAVFSLYLFLALNHNFVTNSF 365
+R+S ++ Q + Y RET +++ R + L+ N+N+ N++
Sbjct: 270 KRYSRSREREQKSYKNENSYRKYRETSKERSRDRTERERSKERKIISSLSNNYNYNNNNY 329
Query: 364 HLN 356
N
Sbjct: 330 KYN 332
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 5.6
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +3
Query: 177 LSPSSPGTLSSAIRSSTSGKPP 242
+SP S L SA+RS G+ P
Sbjct: 389 VSPVSMSALVSAVRSPAGGQLP 410
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 21.8 bits (44), Expect = 5.6
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +3
Query: 186 SSPGTLSSAIRSSTSGKP 239
SSP LS+A SSTS P
Sbjct: 825 SSPRYLSAAATSSTSTSP 842
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 7.4
Identities = 12/37 (32%), Positives = 16/37 (43%)
Frame = -1
Query: 213 SRKKGSREKTEKGSSNALAIGSLYARFLKCRSQYGTS 103
S++ SR +G SNA + K S GTS
Sbjct: 74 SKRSKSRSPESRGRSNASNTSKTFILSEKLESSDGTS 110
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 7.4
Identities = 12/37 (32%), Positives = 16/37 (43%)
Frame = -1
Query: 213 SRKKGSREKTEKGSSNALAIGSLYARFLKCRSQYGTS 103
S++ SR +G SNA + K S GTS
Sbjct: 74 SKRSKSRSPESRGRSNASNTSKTFILSEKLESSDGTS 110
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 7.4
Identities = 12/37 (32%), Positives = 16/37 (43%)
Frame = -1
Query: 213 SRKKGSREKTEKGSSNALAIGSLYARFLKCRSQYGTS 103
S++ SR +G SNA + K S GTS
Sbjct: 74 SKRSKSRSPESRGRSNASNTSKTFILSEKLESSDGTS 110
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 7.4
Identities = 12/37 (32%), Positives = 16/37 (43%)
Frame = -1
Query: 213 SRKKGSREKTEKGSSNALAIGSLYARFLKCRSQYGTS 103
S++ SR +G SNA + K S GTS
Sbjct: 74 SKRSKSRSPESRGRSNASNTSKTFILSEKLESSDGTS 110
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 7.4
Identities = 12/37 (32%), Positives = 16/37 (43%)
Frame = -1
Query: 213 SRKKGSREKTEKGSSNALAIGSLYARFLKCRSQYGTS 103
S++ SR +G SNA + K S GTS
Sbjct: 74 SKRSKSRSPESRGRSNASNTSKTFILSEKLESSDGTS 110
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 7.4
Identities = 12/37 (32%), Positives = 16/37 (43%)
Frame = -1
Query: 213 SRKKGSREKTEKGSSNALAIGSLYARFLKCRSQYGTS 103
S++ SR +G SNA + K S GTS
Sbjct: 74 SKRSKSRSPESRGRSNASNTSKTFILSEKLESSDGTS 110
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 21.4 bits (43), Expect = 7.4
Identities = 12/37 (32%), Positives = 16/37 (43%)
Frame = -1
Query: 213 SRKKGSREKTEKGSSNALAIGSLYARFLKCRSQYGTS 103
S++ SR +G SNA + K S GTS
Sbjct: 74 SKRSKSRSPESRGRSNASNTSKTFILSEKLESSDGTS 110
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.4 bits (43), Expect = 7.4
Identities = 12/37 (32%), Positives = 16/37 (43%)
Frame = -1
Query: 213 SRKKGSREKTEKGSSNALAIGSLYARFLKCRSQYGTS 103
S++ SR +G SNA + K S GTS
Sbjct: 74 SKRSKSRSPESRGRSNASNTSKTFILSEKLESSDGTS 110
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,015
Number of Sequences: 438
Number of extensions: 3176
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18704709
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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