BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bmov10a13 (682 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPBC119.02 |ubc4||ubiquitin conjugating enzyme Ubc4|Schizosaccha... 260 1e-70 SPAC1250.03 |ubc14||ubiquitin conjugating enzyme Ubc14|Schizosac... 134 1e-32 SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme Ubc13|Sch... 134 1e-32 SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme Ubc1|Schizosacch... 129 3e-31 SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enz... 125 7e-30 SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2... 112 5e-26 SPBC1198.09 |ubc16||ubiquitin conjugating enzyme Ubc16|Schizosac... 108 8e-25 SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme Ubc3|Schizo... 107 2e-24 SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme Hus5|Schizosacch... 103 2e-23 SPBC1105.09 |ubc15||ubiquitin conjugating enzyme Ubc15|Schizosac... 101 7e-23 SPCC777.10c |ubc12||ubiquitin conjugating enzyme Ubc12|Schizosac... 84 2e-17 SPBC211.07c |ubc8||ubiquitin conjugating enzyme Ubc8|Schizosacch... 83 5e-17 SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme Ubc6|Schizosacc... 76 4e-15 SPCC338.05c |mms2|spm2|ubiquitin conjugating enzyme Mms2|Schizos... 51 1e-07 SPAC23G3.09 |taf4||transcription factor TFIID complex subunit Ta... 28 1.4 SPBC4B4.03 |rsc1||RSC complex subunit Rsc1 |Schizosaccharomyces ... 27 1.9 SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr... 27 3.3 SPAC1610.03c |crp79|meu5|poly|Schizosaccharomyces pombe|chr 1|||... 26 4.4 SPBC947.11c |elg1||DNA replication factor C complex subunit Elg1... 26 4.4 SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 25 7.7 SPBC1773.03c |||aminotransferase class-III, unknown specificty|S... 25 7.7 >SPBC119.02 |ubc4||ubiquitin conjugating enzyme Ubc4|Schizosaccharomyces pombe|chr 2|||Manual Length = 147 Score = 260 bits (638), Expect = 1e-70 Identities = 116/130 (89%), Positives = 121/130 (93%) Frame = +2 Query: 293 MALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDY 472 MALKRINREL DLG+DPP+ CSAGP G+DLFHWQATIMGP DSPY GGVFFL+IHFPTDY Sbjct: 1 MALKRINRELADLGKDPPSSCSAGPVGDDLFHWQATIMGPADSPYAGGVFFLSIHFPTDY 60 Query: 473 PFKPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLV 652 PFKPPKV FTTRIYHPNINSNGSICLDILR QWSPALTISKVLLSICSLL DPNPDDPLV Sbjct: 61 PFKPPKVNFTTRIYHPNINSNGSICLDILRDQWSPALTISKVLLSICSLLTDPNPDDPLV 120 Query: 653 PEIARIYKTD 682 PEIA +YKTD Sbjct: 121 PEIAHVYKTD 130 >SPAC1250.03 |ubc14||ubiquitin conjugating enzyme Ubc14|Schizosaccharomyces pombe|chr 1|||Manual Length = 155 Score = 134 bits (324), Expect = 1e-32 Identities = 61/133 (45%), Positives = 82/133 (61%), Gaps = 1/133 (0%) Frame = +2 Query: 287 SQMALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPT 466 S + +R+ +E DL P ++LFHW T +GP DS Y GG F ++ FP Sbjct: 5 SPSSSRRLTKEYSDLREHPIPDIRVNLVDDNLFHWACTALGPSDSVYAGGKFHFSLKFPL 64 Query: 467 DYPFKPPKVAFTTRIYHPNINSNGSICLDILRAQ-WSPALTISKVLLSICSLLCDPNPDD 643 DYPF+PP + FTTRIYHPN +S G++CL IL+ Q + P++ + VL I LL +PNPDD Sbjct: 65 DYPFQPPTIEFTTRIYHPNFDSEGNVCLAILKQQVFKPSIKLRSVLEQILQLLREPNPDD 124 Query: 644 PLVPEIARIYKTD 682 PLV IA Y+ D Sbjct: 125 PLVASIAEQYRND 137 >SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme Ubc13|Schizosaccharomyces pombe|chr 1|||Manual Length = 148 Score = 134 bits (323), Expect = 1e-32 Identities = 64/129 (49%), Positives = 86/129 (66%), Gaps = 1/129 (0%) Frame = +2 Query: 293 MAL-KRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTD 469 MAL KRI +E++ L RDPP A P ++L +++ T+ GP S Y+GG F L + P + Sbjct: 1 MALPKRIIKEIETLTRDPPPGIVAAPTEDNLRYFKITMEGPQQSAYEGGKFHLELFLPDE 60 Query: 470 YPFKPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPL 649 YP PP V F T+IYHPN++ G ICL L+ WSPAL I VLLSI +L+ PNPDDPL Sbjct: 61 YPMMPPNVRFLTKIYHPNVDKLGRICLSTLKKDWSPALQIRTVLLSIQALMGAPNPDDPL 120 Query: 650 VPEIARIYK 676 ++A+I+K Sbjct: 121 DNDVAKIWK 129 >SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme Ubc1|Schizosaccharomyces pombe|chr 2|||Manual Length = 217 Score = 129 bits (312), Expect = 3e-31 Identities = 56/125 (44%), Positives = 81/125 (64%), Gaps = 1/125 (0%) Frame = +2 Query: 302 KRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFK 481 +RI +EL D+ +D A +D+ H + GP +PY+GG F + I P DYPF+ Sbjct: 7 RRIAKELADVQQDKQAGIQVWTINDDISHLKGMFRGPEGTPYEGGYFVVDIEIPIDYPFR 66 Query: 482 PPKVAFTTRIYHPNINS-NGSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPE 658 PPK+ F T+IYHPN++S G+ICLDIL+ QWSP T+ L+S+ SLLC P P +P + Sbjct: 67 PPKMNFDTKIYHPNVSSQTGAICLDILKDQWSPVYTMKSALISLQSLLCTPEPSNPQDAQ 126 Query: 659 IARIY 673 +A++Y Sbjct: 127 VAQVY 131 >SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enzyme E2 Rhp6|Schizosaccharomyces pombe|chr 1|||Manual Length = 151 Score = 125 bits (301), Expect = 7e-30 Identities = 54/130 (41%), Positives = 83/130 (63%) Frame = +2 Query: 287 SQMALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPT 466 S A +R+ R+ + + +DPPA SA P +++ W A I+GP D+P++ G F L + F Sbjct: 2 STTARRRLMRDFKRMQQDPPAGVSASPVSDNVMLWNAVIIGPADTPFEDGTFKLVLSFDE 61 Query: 467 DYPFKPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDP 646 YP KPP V F + ++HPN+ +NG +CLDIL+ +WSP ++ +L SI SLL DPN P Sbjct: 62 QYPNKPPLVKFVSTMFHPNVYANGELCLDILQNRWSPTYDVAAILTSIQSLLNDPNNASP 121 Query: 647 LVPEIARIYK 676 E A++++ Sbjct: 122 ANAEAAQLHR 131 >SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2-C |Schizosaccharomyces pombe|chr 3|||Manual Length = 176 Score = 112 bits (269), Expect = 5e-26 Identities = 51/128 (39%), Positives = 78/128 (60%), Gaps = 1/128 (0%) Frame = +2 Query: 302 KRINRELQDLGRDPPAQCSAGPHGE-DLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPF 478 KR+ EL L SA P + +L HW TI GP D+ Y+G F +++ FP +YP+ Sbjct: 31 KRLRSELMSLMMSNTPGISAFPDSDSNLLHWAGTITGPSDTYYEGLKFKISMSFPANYPY 90 Query: 479 KPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPE 658 PP + FT+ ++HPN++ +G+ICLDIL+ +WS + +LLS+ SLL +PN PL + Sbjct: 91 SPPTIIFTSPMWHPNVDMSGNICLDILKDKWSAVYNVQTILLSLQSLLGEPNNASPLNAQ 150 Query: 659 IARIYKTD 682 A ++ D Sbjct: 151 AAELWSKD 158 >SPBC1198.09 |ubc16||ubiquitin conjugating enzyme Ubc16|Schizosaccharomyces pombe|chr 2|||Manual Length = 160 Score = 108 bits (259), Expect = 8e-25 Identities = 46/102 (45%), Positives = 67/102 (65%), Gaps = 1/102 (0%) Frame = +2 Query: 377 DLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNIN-SNGSICLD 553 D+FHW+A I GP ++PY+GG + L IH YP PP V F T+I HPNI+ +NG +C+D Sbjct: 33 DMFHWKAVIEGPTETPYEGGQWVLDIHVHEGYPISPPSVYFQTKIVHPNISWTNGEVCMD 92 Query: 554 ILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKT 679 IL+ WSPA ++ L+I SLL + + PL + A++ +T Sbjct: 93 ILKTHWSPAWSLQSACLAIISLLSNYDASSPLNVDAAKLLRT 134 >SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme Ubc3|Schizosaccharomyces pombe|chr 2|||Manual Length = 166 Score = 107 bits (256), Expect = 2e-24 Identities = 49/144 (34%), Positives = 83/144 (57%), Gaps = 14/144 (9%) Frame = +2 Query: 293 MALKRINRELQDLGRDPPAQCSAGPHGED-LFHWQATIMGPVDSPYQGGVFFLTIHFPTD 469 MAL+R+ +E ++L + P +AGP ED F W I GP +P++GG++ T+ FP+D Sbjct: 5 MALRRLMKEYKELTENGPDGITAGPSNEDDFFTWDCLIQGPDGTPFEGGLYPATLKFPSD 64 Query: 470 YPFKPPKVAFTTRIYHPNINSNGSICLDILRA-------------QWSPALTISKVLLSI 610 YP PP + F +HPN+ +G++C+ IL A +WSP ++ K+LLS+ Sbjct: 65 YPLGPPTLKFECEFFHPNVYKDGTVCISILHAPGDDPNMYESSSERWSPVQSVEKILLSV 124 Query: 611 CSLLCDPNPDDPLVPEIARIYKTD 682 S+L +PN + + ++++ D Sbjct: 125 MSMLAEPNDESGANIDACKMWRED 148 >SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme Hus5|Schizosaccharomyces pombe|chr 1|||Manual Length = 157 Score = 103 bits (247), Expect = 2e-23 Identities = 51/139 (36%), Positives = 77/139 (55%), Gaps = 7/139 (5%) Frame = +2 Query: 287 SQMALKRINRELQDLGRDPP-----AQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLT 451 S + R+ E + RD P C + G DL +W+ I G + ++GG++ LT Sbjct: 2 SSLCKTRLQEERKQWRRDHPFGFYAKPCKSSDGGLDLMNWKVGIPGKPKTSWEGGLYKLT 61 Query: 452 IHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRAQ--WSPALTISKVLLSICSLLC 625 + FP +YP +PPK FT ++HPN+ +G++CL IL + W PA+TI ++LL I LL Sbjct: 62 MAFPEEYPTRPPKCRFTPPLFHPNVYPSGTVCLSILNEEEGWKPAITIKQILLGIQDLLD 121 Query: 626 DPNPDDPLVPEIARIYKTD 682 DPN P E ++K D Sbjct: 122 DPNIASPAQTEAYTMFKKD 140 >SPBC1105.09 |ubc15||ubiquitin conjugating enzyme Ubc15|Schizosaccharomyces pombe|chr 2|||Manual Length = 167 Score = 101 bits (243), Expect = 7e-23 Identities = 46/137 (33%), Positives = 78/137 (56%), Gaps = 14/137 (10%) Frame = +2 Query: 308 INRELQDLGRDPPAQCSAG-PHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKP 484 + ++L+++ ++PP S G + +F W+ I+GP D+ Y+GG F T+ FP DYP P Sbjct: 10 LRKQLKEIQKNPPQGFSVGLVDDKSIFEWEVMIIGPEDTLYEGGFFHATLSFPQDYPLMP 69 Query: 485 PKVAFTTRIYHPNINSNGSICLDILR-------------AQWSPALTISKVLLSICSLLC 625 PK+ FTT I+HPN++ NG +C+ IL +W P + +L+S+ S+L Sbjct: 70 PKMKFTTEIWHPNVHPNGEVCISILHPPGDDKYGYEDAGERWLPVHSPETILISVISMLS 129 Query: 626 DPNPDDPLVPEIARIYK 676 PN + P + A+ ++ Sbjct: 130 SPNDESPANIDAAKEFR 146 >SPCC777.10c |ubc12||ubiquitin conjugating enzyme Ubc12|Schizosaccharomyces pombe|chr 3|||Manual Length = 177 Score = 84.2 bits (199), Expect = 2e-17 Identities = 36/85 (42%), Positives = 51/85 (60%) Frame = +2 Query: 410 PVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTI 589 P + Y+GG F I +YP PPKV +IYHPNI+ G++CL+ILR W+P L + Sbjct: 60 PDEGYYKGGKFKFRIQIDDNYPHDPPKVKCLNKIYHPNIDIEGNVCLNILRQDWNPVLNL 119 Query: 590 SKVLLSICSLLCDPNPDDPLVPEIA 664 + +L+ + L PN +DPL E A Sbjct: 120 NSILVGLQFLFLSPNAEDPLNKEAA 144 >SPBC211.07c |ubc8||ubiquitin conjugating enzyme Ubc8|Schizosaccharomyces pombe|chr 2|||Manual Length = 184 Score = 82.6 bits (195), Expect = 5e-17 Identities = 35/90 (38%), Positives = 56/90 (62%), Gaps = 2/90 (2%) Frame = +2 Query: 407 GPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSICLDILRAQWSPAL 583 GP ++PY GG++ + + P++YP+K P + F RI+HPNI+ +GS+CLD++ WSP Sbjct: 38 GPSETPYSGGIWKVHVELPSEYPWKSPSIGFVNRIFHPNIDELSGSVCLDVINQTWSPMF 97 Query: 584 TISKVL-LSICSLLCDPNPDDPLVPEIARI 670 + + + + LL PN DPL E A + Sbjct: 98 DMINIFEVFLPQLLRYPNASDPLNGEAAAL 127 >SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme Ubc6|Schizosaccharomyces pombe|chr 1|||Manual Length = 227 Score = 76.2 bits (179), Expect = 4e-15 Identities = 39/115 (33%), Positives = 60/115 (52%), Gaps = 3/115 (2%) Frame = +2 Query: 287 SQMALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPT 466 S+ A KR+ +E L ++P A P E++ W I GP D+PY+GG + T+ FP Sbjct: 3 SKGAYKRLMKEYLALQKNPVELVDAKPATENILEWHYIITGPPDTPYEGGQYHGTLIFPP 62 Query: 467 DYPFKPPKVAFTTRIYHPNINSNGSICL---DILRAQWSPALTISKVLLSICSLL 622 DYPFKPP + T +N +CL D W+P+ +S +L+ + S + Sbjct: 63 DYPFKPPAIRMITP--SGRFQTNTRLCLSFSDFHPKSWNPSWMVSTILVGLVSFM 115 >SPCC338.05c |mms2|spm2|ubiquitin conjugating enzyme Mms2|Schizosaccharomyces pombe|chr 3|||Manual Length = 139 Score = 51.2 bits (117), Expect = 1e-07 Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 7/95 (7%) Frame = +2 Query: 347 AQCSAGPHGED---LFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYH 517 + CS G D L W ATI+GP S ++ ++ L IH +YP PP V F +RI Sbjct: 24 SSCSYGLTNADDITLSDWNATILGPAHSVHENRIYSLKIHCDANYPDAPPIVTFVSRINL 83 Query: 518 PNIN-SNGSI---CLDILRAQWSPALTISKVLLSI 610 P ++ G + +D LR W ++ VLL + Sbjct: 84 PGVDGETGKVNPHKIDCLR-HWKREYSMETVLLDL 117 >SPAC23G3.09 |taf4||transcription factor TFIID complex subunit Taf4|Schizosaccharomyces pombe|chr 1|||Manual Length = 365 Score = 27.9 bits (59), Expect = 1.4 Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Frame = +2 Query: 284 NSQMALKRINRELQDLGRDPPAQCSAG---PHGEDLFHWQATIMGPVDSPYQGGVF 442 +S A K I+ + Q+ + A AG P G + W AT M P+ +P GG F Sbjct: 246 SSSAAAKNISEDAQNRMTNATASIMAGSALPSGGKKYSWMATDMTPM-TPAVGGGF 300 >SPBC4B4.03 |rsc1||RSC complex subunit Rsc1 |Schizosaccharomyces pombe|chr 2|||Manual Length = 803 Score = 27.5 bits (58), Expect = 1.9 Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 3/39 (7%) Frame = +2 Query: 575 PALTISKVLLSICSLLCDPNPDD---PLVPEIARIYKTD 682 PA++I LL++ + NP D P+V +I RI+K+D Sbjct: 344 PAVSIDGTLLNVGDWVLIRNPADSSKPIVSQIYRIWKSD 382 >SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr 1|||Manual Length = 1517 Score = 26.6 bits (56), Expect = 3.3 Identities = 15/50 (30%), Positives = 21/50 (42%), Gaps = 3/50 (6%) Frame = +3 Query: 348 HNVRQAHTVKIC---SIGKPQLWAQLTVLIKEEFSSLPYISLQTTLSNHQ 488 H V +T C ++ P LWA L + F Y L+T N+Q Sbjct: 406 HTVFSGYTTVWCPQNAVFVPGLWANLATRYRASFMLTDYAGLKTIAYNYQ 455 >SPAC1610.03c |crp79|meu5|poly|Schizosaccharomyces pombe|chr 1|||Manual Length = 710 Score = 26.2 bits (55), Expect = 4.4 Identities = 9/24 (37%), Positives = 15/24 (62%) Frame = +2 Query: 464 TDYPFKPPKVAFTTRIYHPNINSN 535 TD FKP + T +++P+I +N Sbjct: 113 TDKKFKPNDTSITANVFNPSIQNN 136 >SPBC947.11c |elg1||DNA replication factor C complex subunit Elg1|Schizosaccharomyces pombe|chr 2|||Manual Length = 920 Score = 26.2 bits (55), Expect = 4.4 Identities = 14/31 (45%), Positives = 20/31 (64%) Frame = +2 Query: 569 WSPALTISKVLLSICSLLCDPNPDDPLVPEI 661 +SPA I KVL + L DPN + P++P+I Sbjct: 291 FSPAPFIQKVLSRL--LPSDPNVEMPMIPQI 319 >SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual Length = 4717 Score = 25.4 bits (53), Expect = 7.7 Identities = 8/23 (34%), Positives = 16/23 (69%) Frame = +1 Query: 172 DFGGTFAFRQGAILQSLIKGPWL 240 D G+ +FR+G ++++L G W+ Sbjct: 943 DDNGSLSFREGVLVEALRNGYWI 965 >SPBC1773.03c |||aminotransferase class-III, unknown specificty|Schizosaccharomyces pombe|chr 2|||Manual Length = 459 Score = 25.4 bits (53), Expect = 7.7 Identities = 15/51 (29%), Positives = 20/51 (39%) Frame = +2 Query: 362 GPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIY 514 G HG LF M P PY+G T H + ++ + TT Y Sbjct: 146 GYHGNTLFALSVGGMKPRKQPYEGVFSHTTSHVSPCFEYRYKENGETTEEY 196 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 3,012,433 Number of Sequences: 5004 Number of extensions: 65823 Number of successful extensions: 177 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 164 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 169 length of database: 2,362,478 effective HSP length: 70 effective length of database: 2,012,198 effective search space used: 313902888 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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