Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10a12
(635 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0033 - 251730-251855,252068-252144,252228-252318,252644-25... 154 6e-38
12_01_0032 - 266954-267079,267204-267245,267290-267366,267450-26... 141 5e-34
08_01_0215 - 1714224-1714364,1714795-1715187,1715279-1715377,171... 52 4e-07
12_01_0211 - 1601129-1601272,1601670-1602062,1602142-1602240,160... 51 7e-07
11_01_0210 - 1647922-1648065,1648459-1648851,1648930-1649028,164... 51 7e-07
03_01_0423 + 3240224-3240394,3241464-3241628,3242322-3242339,324... 33 0.19
07_01_0389 - 2915191-2915604,2915696-2915752,2915867-2915922,291... 29 2.3
02_03_0390 + 18448671-18448889,18449567-18449632,18449702-184497... 29 2.3
07_03_0922 - 22612773-22613321,22613616-22614189,22614389-226144... 29 4.1
05_06_0056 + 25246631-25246913,25247047-25247141,25247593-252476... 29 4.1
11_01_0534 + 4227838-4228001,4229034-4229151,4229593-4229752,422... 28 5.4
11_08_0102 - 28354880-28355056,28355159-28355376,28355634-283557... 27 9.4
>11_01_0033 -
251730-251855,252068-252144,252228-252318,252644-252704,
252800-252858,252955-253045,253238-253406,253760-253787
Length = 233
Score = 154 bits (373), Expect = 6e-38
Identities = 79/169 (46%), Positives = 110/169 (65%), Gaps = 2/169 (1%)
Frame = +1
Query: 130 MPKSKRDKKVSLTKTNKK-GLVHKQKVIEEIRNSLSKYEHIFLFTINNMRNTKLKDLRND 306
MPKSKR++ V+L+KT KK GL K KV+ +I++++ Y + ++FT +NMRN KLKDLR
Sbjct: 1 MPKSKRNRPVTLSKTKKKPGLERKGKVVTDIKDAVEHYANAYVFTYDNMRNQKLKDLREQ 60
Query: 307 WKDS-RFFFGKNKVMAIALGKTKSDEIEEQLNLLSKKLKGQCGLLMTNRDVPDVLNWFKS 483
K S R F KVM IALG++ +DE + L+ LSK L+G GL TN DV F+
Sbjct: 61 LKSSSRIFLAGKKVMQIALGRSSADEAKTGLHKLSKFLQGDTGLFFTNLPRDDVERLFRE 120
Query: 484 YQASEYARAGFIATKDVLLPKGPLADFSHTIEPHLRRLGLPTSLEKGVI 630
++ ++AR G I T+ V L +GPL F+H +EP LR+ GLP L KG +
Sbjct: 121 FEEHDFARTGSIVTETVELKEGPLEQFTHEMEPFLRKQGLPVRLNKGAV 169
>12_01_0032 -
266954-267079,267204-267245,267290-267366,267450-267540,
267864-267924,268021-268079,268176-268266,268481-268698,
268818-268824,269013-269148,270064-270307
Length = 383
Score = 141 bits (341), Expect = 5e-34
Identities = 73/160 (45%), Positives = 103/160 (64%), Gaps = 2/160 (1%)
Frame = +1
Query: 157 VSLTKTNKK-GLVHKQKVIEEIRNSLSKYEHIFLFTINNMRNTKLKDLRNDWKDS-RFFF 330
V+L+KT KK GL K KV+ +I++++ Y + ++FT +NMRN KLKDLR K S R F
Sbjct: 146 VTLSKTKKKPGLERKGKVVTDIKDAVEHYANAYVFTYDNMRNQKLKDLREQLKSSSRIFL 205
Query: 331 GKNKVMAIALGKTKSDEIEEQLNLLSKKLKGQCGLLMTNRDVPDVLNWFKSYQASEYARA 510
KVM IALG++ +DE + L+ LSK L+G GL TN DV F+ ++ ++AR
Sbjct: 206 AGKKVMQIALGRSPADEAKTGLHKLSKFLQGDTGLFFTNLPRDDVERLFREFEEHDFART 265
Query: 511 GFIATKDVLLPKGPLADFSHTIEPHLRRLGLPTSLEKGVI 630
G IAT+ V L +GPL F+H +EP LR+ G+P L KG +
Sbjct: 266 GSIATETVELKEGPLEQFTHEMEPFLRKQGMPVRLNKGAV 305
>08_01_0215 -
1714224-1714364,1714795-1715187,1715279-1715377,
1716248-1716316,1716408-1716665
Length = 319
Score = 52.0 bits (119), Expect = 4e-07
Identities = 40/160 (25%), Positives = 74/160 (46%), Gaps = 2/160 (1%)
Frame = +1
Query: 157 VSLTKTNKKGLVHKQKVIEEIRNSLSKYEHIFLFTINNMRNTKLKDLRNDWK-DSRFFFG 333
+ TK KK + + +K+ + L +Y + + +N+ + +L+++R + DS G
Sbjct: 3 IKRTKAEKK-VAYDKKLCQ----LLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMG 57
Query: 334 KNKVMAIALGKTKSDEIEEQLNLLSKKLKGQCGLLMTNRDVPDVLNWFKSYQASEYARAG 513
KN ++ + + ++ L L G GL+ T D+ +V Y+ AR G
Sbjct: 58 KNTLIRRCIKVHADNTGNKEFLELMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVG 117
Query: 514 FIATKDVLLPKGPLA-DFSHTIEPHLRRLGLPTSLEKGVI 630
+A DV++P G D S T + L +PT + KG +
Sbjct: 118 LVAPVDVVVPPGNTGLDPSQT--SFFQVLNIPTKINKGTV 155
>12_01_0211 -
1601129-1601272,1601670-1602062,1602142-1602240,
1602920-1602988,1603071-1603328
Length = 320
Score = 51.2 bits (117), Expect = 7e-07
Identities = 40/160 (25%), Positives = 73/160 (45%), Gaps = 2/160 (1%)
Frame = +1
Query: 157 VSLTKTNKKGLVHKQKVIEEIRNSLSKYEHIFLFTINNMRNTKLKDLRNDWK-DSRFFFG 333
+ TK KK + + +K+ + L +Y + + +N+ + +L+++R + DS G
Sbjct: 3 IKRTKAEKK-VAYDKKLCQ----LLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMG 57
Query: 334 KNKVMAIALGKTKSDEIEEQLNLLSKKLKGQCGLLMTNRDVPDVLNWFKSYQASEYARAG 513
KN ++ + + + L L G GL+ T D+ +V Y+ AR G
Sbjct: 58 KNTLIRRCIKVHADNTGNKDFLELMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVG 117
Query: 514 FIATKDVLLPKGPLA-DFSHTIEPHLRRLGLPTSLEKGVI 630
+A DV++P G D S T + L +PT + KG +
Sbjct: 118 LVAPVDVVVPPGNTGLDPSQT--SFFQVLNIPTKINKGTV 155
>11_01_0210 -
1647922-1648065,1648459-1648851,1648930-1649028,
1649706-1649774,1649877-1650134
Length = 320
Score = 51.2 bits (117), Expect = 7e-07
Identities = 40/160 (25%), Positives = 73/160 (45%), Gaps = 2/160 (1%)
Frame = +1
Query: 157 VSLTKTNKKGLVHKQKVIEEIRNSLSKYEHIFLFTINNMRNTKLKDLRNDWK-DSRFFFG 333
+ TK KK + + +K+ + L +Y + + +N+ + +L+++R + DS G
Sbjct: 3 IKRTKAEKK-VAYDKKLCQ----LLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMG 57
Query: 334 KNKVMAIALGKTKSDEIEEQLNLLSKKLKGQCGLLMTNRDVPDVLNWFKSYQASEYARAG 513
KN ++ + + + L L G GL+ T D+ +V Y+ AR G
Sbjct: 58 KNTLIRRCIKVHADNTGNKDFLELMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVG 117
Query: 514 FIATKDVLLPKGPLA-DFSHTIEPHLRRLGLPTSLEKGVI 630
+A DV++P G D S T + L +PT + KG +
Sbjct: 118 LVAPVDVVVPPGNTGLDPSQT--SFFQVLNIPTKINKGTV 155
>03_01_0423 + 3240224-3240394,3241464-3241628,3242322-3242339,
3242494-3242836,3244138-3248540,3248928-3249107,
3249108-3250892,3251055-3252173
Length = 2727
Score = 33.1 bits (72), Expect = 0.19
Identities = 26/108 (24%), Positives = 55/108 (50%), Gaps = 1/108 (0%)
Frame = +1
Query: 136 KSKRDKKVSLTKTNKKGLVHKQKVIEEIRNSLSKYEHIFLFTINNMRNTKLKDLR-NDWK 312
+S+ +K V T+ + L HK K I E++NSL E + + +L+DL N K
Sbjct: 883 RSEMEKMVQKTQMLDQELEHKNKEISELQNSLQ--EQVQKCILAETSLLRLEDLHTNSQK 940
Query: 313 DSRFFFGKNKVMAIALGKTKSDEIEEQLNLLSKKLKGQCGLLMTNRDV 456
+++ + ++ L + ++D ++ L +S++LK + + +D+
Sbjct: 941 EAKTLAHDLERLSEQLTEVENDRLD--LQNISRELKNTISEINSEKDL 986
>07_01_0389 -
2915191-2915604,2915696-2915752,2915867-2915922,
2916053-2916113,2916243-2916365,2916505-2916537,
2916617-2916709,2916839-2916934,2917025-2917203,
2917344-2917530,2918051-2918184,2918311-2918518,
2918598-2918633,2918785-2919241,2919633-2919736,
2920489-2920569,2920646-2920697,2920837-2920876,
2920991-2921085,2921241-2921383,2921899-2922006,
2922120-2922221,2922302-2922348,2922425-2922554,
2923173-2923304,2923404-2923616,2923709-2923963,
2924053-2924799
Length = 1460
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +1
Query: 118 NKTNMPKSKRDKKVSLTKTNKKGLVHKQKVIEEIRNSLSKYE 243
+K N+PK+ D+ + +NK+ HK K E NS K++
Sbjct: 782 SKFNLPKNMGDQNMEGNVSNKRQKGHKDKASSEKSNSDEKFK 823
>02_03_0390 +
18448671-18448889,18449567-18449632,18449702-18449761,
18449864-18449959,18452287-18452447,18452669-18452790,
18452872-18453239,18453653-18453739,18453835-18453969,
18454349-18454471,18454771-18454854,18455023-18455187,
18455310-18455486,18455660-18455773,18455912-18456016,
18457056-18457174,18457244-18457385,18457461-18457555,
18457757-18457862,18458125-18458204,18458285-18458461,
18459828-18459912,18460024-18460104,18460208-18460351,
18460468-18460563,18460654-18460854,18461462-18461895,
18462417-18462478,18462622-18462872,18462956-18463030,
18463110-18463300,18463696-18463867,18463956-18464020,
18464646-18464778,18464861-18464962,18465047-18465130,
18465656-18465730,18465818-18465877,18465967-18466223,
18466560-18466608,18466781-18466941,18467013-18467079,
18467174-18467299,18467422-18467592,18468566-18468769,
18469059-18469165,18469608-18469737,18469774-18469959,
18470704-18470742
Length = 2202
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +1
Query: 400 LLSKKLKGQCGLLMTNRDVPDVLNWFKSYQASEY 501
++S + GQ G L+ NR+VPDVL YQ S Y
Sbjct: 298 MISYMIDGQ-GYLIINREVPDVLFSIIIYQISAY 330
>07_03_0922 -
22612773-22613321,22613616-22614189,22614389-22614466,
22615455-22615504,22616215-22616448
Length = 494
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 271 MRNTKLKDLRNDWKDSRFFFGKNKVMAIALGKTKSDE 381
+R ++ +LRND K S F G + M +L +K D+
Sbjct: 101 LRKRRVAELRNDLKKSENFIGSLQSMIKSLSNSKHDD 137
>05_06_0056 +
25246631-25246913,25247047-25247141,25247593-25247629,
25248158-25248219,25248305-25248418,25249248-25249352,
25249441-25249539,25250203-25250359,25250473-25250579
Length = 352
Score = 28.7 bits (61), Expect = 4.1
Identities = 26/95 (27%), Positives = 38/95 (40%)
Frame = +1
Query: 328 FGKNKVMAIALGKTKSDEIEEQLNLLSKKLKGQCGLLMTNRDVPDVLNWFKSYQASEYAR 507
FG + ALG L + +K + + T R V + + F+ +QA Y+
Sbjct: 76 FGAFAAVCGALGAAGYSSYAYTLEEVDQKTREFRKAMTTPRPVAEDASEFEKFQAMIYST 135
Query: 508 AGFIATKDVLLPKGPLADFSHTIEPHLRRLGLPTS 612
A K + D HTIE H+R PTS
Sbjct: 136 A----MKAPVAAIEFYMDVRHTIEDHIRGFAEPTS 166
>11_01_0534 +
4227838-4228001,4229034-4229151,4229593-4229752,
4229901-4230027,4230899-4231037,4231119-4231301,
4231395-4231464,4231550-4231662
Length = 357
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1
Query: 286 LKDLRNDWKDSRFFFGKNKVMAI 354
+ D++ D+K +F FGKN VM I
Sbjct: 266 VSDVKKDFKSLQFIFGKNAVMDI 288
>11_08_0102 -
28354880-28355056,28355159-28355376,28355634-28355712,
28356451-28356519,28356602-28356681,28356818-28356925,
28357103-28357169,28357894-28357959,28358042-28358119,
28358198-28358250,28359542-28359575,28359851-28359865,
28360082-28360109,28360628-28360716,28361688-28361810,
28362192-28362296,28362381-28362485,28362924-28363139,
28364656-28364845,28365193-28365418,28366096-28366162
Length = 730
Score = 27.5 bits (58), Expect = 9.4
Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 3/96 (3%)
Frame = -1
Query: 407 DNRFSCSSISSLLVLPRAIAITLFFPKKNLESFQSFRRSFNFVFLMLLMV---NKNMCSY 237
D RF+ ISS R ++ + P K++ +FQ + ++++M K++C Y
Sbjct: 79 DVRFNVFGISSYRQNQREVSFFILHPFKHIATFQIINAIMSGRDVLVIMAAGGGKSLC-Y 137
Query: 236 LLSEFLISSMTFCLCTKPFLLVFVSDTFLSLFDFGI 129
L L +T L P LL + D + L GI
Sbjct: 138 QLPAVLHDGIT--LVVSP-LLSLIQDQVMGLAALGI 170
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,002,736
Number of Sequences: 37544
Number of extensions: 285794
Number of successful extensions: 682
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 653
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 679
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1561213104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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