Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10a12
         (635 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    23   6.1  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    23   8.1  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          23   8.1  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    23   8.1  

>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 10/61 (16%), Positives = 31/61 (50%)
 Frame = +1

Query: 217  IRNSLSKYEHIFLFTINNMRNTKLKDLRNDWKDSRFFFGKNKVMAIALGKTKSDEIEEQL 396
            ++  + ++  + +   + M  T   DL+N  K ++     +KV+  ++   + ++++ +L
Sbjct: 1119 LKKGIKEHNQLEVAIGDGMEFTIHGDLKNKAKKNKQIMNNSKVIGNSISNHQDNKLDHEL 1178

Query: 397  N 399
            N
Sbjct: 1179 N 1179


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 23.0 bits (47), Expect = 8.1
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +1

Query: 430 GLLMTNRDVPDVLNWFKSYQASEYAR 507
           GLL+++ D PD+L+    Y  S   R
Sbjct: 897 GLLLSDTDAPDLLSSISLYVPSRSLR 922


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 23.0 bits (47), Expect = 8.1
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = +2

Query: 449 EMCLMY*TGLKVIKHQNMQELA 514
           ++ +MY   L++ KHQNM ++A
Sbjct: 198 KLIVMYLKYLELEKHQNMMQMA 219


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.0 bits (47), Expect = 8.1
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +3

Query: 174 QQKRFSTQTKSHRRNKKF 227
           QQ+RF  Q+ +HRR  ++
Sbjct: 227 QQRRFHRQSPAHRRKPRW 244


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 632,694
Number of Sequences: 2352
Number of extensions: 12149
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62305095
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)