Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10a12
         (635 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061517-1|AAL29065.1|  256|Drosophila melanogaster LD47064p pro...   219   2e-57
AE013599-1019|AAF58844.1|  256|Drosophila melanogaster CG1381-PA...   219   2e-57
BT001618-1|AAN71373.1|  623|Drosophila melanogaster RE35195p pro...    28   9.2  
AE014134-1787|AAN10725.1|  623|Drosophila melanogaster CG5694-PB...    28   9.2  
AE014134-1786|AAF52878.2|  623|Drosophila melanogaster CG5694-PA...    28   9.2  

>AY061517-1|AAL29065.1|  256|Drosophila melanogaster LD47064p
           protein.
          Length = 256

 Score =  219 bits (536), Expect = 2e-57
 Identities = 100/168 (59%), Positives = 135/168 (80%), Gaps = 1/168 (0%)
 Frame = +1

Query: 130 MPKSKRDKKVSLTKTNKKGLVHKQKVIEEIRNSLSKYEHIFLFTINNMRNTKLKDLRNDW 309
           MP+SKRDKKVSLTKT++KGL  KQ+++++IR  + KY +IF+F + NMRN+ LKDLR + 
Sbjct: 1   MPRSKRDKKVSLTKTDRKGLAWKQRIVDDIRFCVGKYPNIFVFQVQNMRNSLLKDLRQEL 60

Query: 310 K-DSRFFFGKNKVMAIALGKTKSDEIEEQLNLLSKKLKGQCGLLMTNRDVPDVLNWFKSY 486
           K +SRF FGKN+VM I LG+TKS+E+E +L+ LSK+L GQ GLL T++   +VL W ++Y
Sbjct: 61  KKNSRFIFGKNRVMQIGLGRTKSEEVEPELHKLSKRLTGQVGLLFTDKSKEEVLEWAENY 120

Query: 487 QASEYARAGFIATKDVLLPKGPLADFSHTIEPHLRRLGLPTSLEKGVI 630
            A EYAR+GF+AT+ V LP GPL DF+H++EPHLR LGLPT LEKG++
Sbjct: 121 WAVEYARSGFVATETVTLPAGPLEDFAHSMEPHLRSLGLPTKLEKGIV 168


>AE013599-1019|AAF58844.1|  256|Drosophila melanogaster CG1381-PA
           protein.
          Length = 256

 Score =  219 bits (536), Expect = 2e-57
 Identities = 100/168 (59%), Positives = 135/168 (80%), Gaps = 1/168 (0%)
 Frame = +1

Query: 130 MPKSKRDKKVSLTKTNKKGLVHKQKVIEEIRNSLSKYEHIFLFTINNMRNTKLKDLRNDW 309
           MP+SKRDKKVSLTKT++KGL  KQ+++++IR  + KY +IF+F + NMRN+ LKDLR + 
Sbjct: 1   MPRSKRDKKVSLTKTDRKGLAWKQRIVDDIRFCVGKYPNIFVFQVQNMRNSLLKDLRQEL 60

Query: 310 K-DSRFFFGKNKVMAIALGKTKSDEIEEQLNLLSKKLKGQCGLLMTNRDVPDVLNWFKSY 486
           K +SRF FGKN+VM I LG+TKS+E+E +L+ LSK+L GQ GLL T++   +VL W ++Y
Sbjct: 61  KKNSRFIFGKNRVMQIGLGRTKSEEVEPELHKLSKRLTGQVGLLFTDKSKEEVLEWAENY 120

Query: 487 QASEYARAGFIATKDVLLPKGPLADFSHTIEPHLRRLGLPTSLEKGVI 630
            A EYAR+GF+AT+ V LP GPL DF+H++EPHLR LGLPT LEKG++
Sbjct: 121 WAVEYARSGFVATETVTLPAGPLEDFAHSMEPHLRSLGLPTKLEKGIV 168


>BT001618-1|AAN71373.1|  623|Drosophila melanogaster RE35195p
           protein.
          Length = 623

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
 Frame = +1

Query: 193 HKQKVIEEIRNSLSKYEHIFLFTINNMRN-TKLKDLRND 306
           HK   +    N L+ YEH  L  INN  + T L D RN+
Sbjct: 99  HKSLFLLRFCNDLAAYEHASLRFINNYNSTTSLYDRRNN 137


>AE014134-1787|AAN10725.1|  623|Drosophila melanogaster CG5694-PB,
           isoform B protein.
          Length = 623

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
 Frame = +1

Query: 193 HKQKVIEEIRNSLSKYEHIFLFTINNMRN-TKLKDLRND 306
           HK   +    N L+ YEH  L  INN  + T L D RN+
Sbjct: 99  HKSLFLLRFCNDLAAYEHASLRFINNYNSTTSLYDRRNN 137


>AE014134-1786|AAF52878.2|  623|Drosophila melanogaster CG5694-PA,
           isoform A protein.
          Length = 623

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
 Frame = +1

Query: 193 HKQKVIEEIRNSLSKYEHIFLFTINNMRN-TKLKDLRND 306
           HK   +    N L+ YEH  L  INN  + T L D RN+
Sbjct: 99  HKSLFLLRFCNDLAAYEHASLRFINNYNSTTSLYDRRNN 137


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,189,622
Number of Sequences: 53049
Number of extensions: 521203
Number of successful extensions: 1276
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1221
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1274
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2662347150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)