Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10a12
         (635 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    25   0.47 
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    25   0.47 
AY217747-1|AAP45005.1|  246|Apis mellifera short-chain dehydroge...    25   0.47 
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    25   0.47 
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    23   3.3  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    23   3.3  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    23   3.3  
AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    22   5.7  

>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 25.4 bits (53), Expect = 0.47
 Identities = 15/54 (27%), Positives = 25/54 (46%)
 Frame = +1

Query: 316 SRFFFGKNKVMAIALGKTKSDEIEEQLNLLSKKLKGQCGLLMTNRDVPDVLNWF 477
           S +F GK   M   L  TK  ++E  +    ++ +G+C     ++  P V  WF
Sbjct: 107 SSYFVGK---MYFNLIDTKCYKLEHPVTGCGERTEGRCLHYTVDKSKPKVYQWF 157


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 25.4 bits (53), Expect = 0.47
 Identities = 15/54 (27%), Positives = 25/54 (46%)
 Frame = +1

Query: 316 SRFFFGKNKVMAIALGKTKSDEIEEQLNLLSKKLKGQCGLLMTNRDVPDVLNWF 477
           S +F GK   M   L  TK  ++E  +    ++ +G+C     ++  P V  WF
Sbjct: 112 SSYFVGK---MYFNLIDTKCYKLEHPVTGCGERTEGRCLHYTVDKSKPKVYQWF 162


>AY217747-1|AAP45005.1|  246|Apis mellifera short-chain
           dehydrogenase/reductase protein.
          Length = 246

 Score = 25.4 bits (53), Expect = 0.47
 Identities = 11/27 (40%), Positives = 19/27 (70%)
 Frame = -1

Query: 275 LMLLMVNKNMCSYLLSEFLISSMTFCL 195
           L LL +N+N  +YL S+  ++++T CL
Sbjct: 149 LNLLPMNRNRPAYLASKCALTTLTDCL 175


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 25.4 bits (53), Expect = 0.47
 Identities = 15/54 (27%), Positives = 25/54 (46%)
 Frame = +1

Query: 316 SRFFFGKNKVMAIALGKTKSDEIEEQLNLLSKKLKGQCGLLMTNRDVPDVLNWF 477
           S +F GK   M   L  TK  ++E  +    ++ +G+C     ++  P V  WF
Sbjct: 112 SSYFVGK---MYFNLIDTKCYKLEHPVTGCGERTEGRCLHYTVDKSKPKVYQWF 162


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +3

Query: 492 IRICKSWLHCNKRC 533
           I +CK WL C+  C
Sbjct: 106 IHLCKLWLTCDVLC 119


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +3

Query: 492 IRICKSWLHCNKRC 533
           I +CK WL C+  C
Sbjct: 106 IHLCKLWLTCDVLC 119


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +3

Query: 492 IRICKSWLHCNKRC 533
           I +CK WL C+  C
Sbjct: 106 IHLCKLWLTCDVLC 119


>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 18/61 (29%), Positives = 24/61 (39%)
 Frame = -1

Query: 242 SYLLSEFLISSMTFCLCTKPFLLVFVSDTFLSLFDFGIFVLLFYYGKDKIYNLISSAISK 63
           S  L   LI      L T    L+F  D  L      I VL   YG   +Y+L  + + K
Sbjct: 443 SAALITMLIVLTALGLPTNDISLLFAVDWMLDRIRTSINVLGDGYGAGIVYHLSKAELDK 502

Query: 62  I 60
           +
Sbjct: 503 M 503


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,906
Number of Sequences: 438
Number of extensions: 3993
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19071468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)