Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10a11
         (470 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      28   0.050
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      28   0.050
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    25   0.35 
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    23   1.4  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    23   1.4  
AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A prot...    23   1.4  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    23   1.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   3.3  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   3.3  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    22   3.3  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   4.3  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   5.7  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   7.6  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 27.9 bits (59), Expect = 0.050
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 378 PPHPQVGPHAPEMETEP 328
           PPHP + PH P + + P
Sbjct: 231 PPHPGLSPHPPHLSSHP 247


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 27.9 bits (59), Expect = 0.050
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 378 PPHPQVGPHAPEMETEP 328
           PPHP + PH P + + P
Sbjct: 123 PPHPGLSPHPPHLSSHP 139


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 25.0 bits (52), Expect = 0.35
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -2

Query: 370 SAGGSACARDGDRTDSAGRTRE 305
           S GG    RDGDR D  G  ++
Sbjct: 91  SGGGRGGGRDGDRGDGGGEEKK 112



 Score = 25.0 bits (52), Expect = 0.35
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +1

Query: 274 GTGARHRRGRVRGSC 318
           GT   H+RGR+ G C
Sbjct: 272 GTSTNHQRGRILGGC 286


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = +3

Query: 180 SGTAAVEGTAAPASVTWPWLANSPWQAP 263
           S  AA  G   P    +PW++ + W +P
Sbjct: 117 SQPAAPGGQPIPDIPRYPWMSITDWMSP 144


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = +3

Query: 180 SGTAAVEGTAAPASVTWPWLANSPWQAP 263
           S  AA  G   P    +PW++ + W +P
Sbjct: 176 SQPAAPGGQPIPDIPRYPWMSITDWMSP 203


>AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A
           protein.
          Length = 150

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = +3

Query: 180 SGTAAVEGTAAPASVTWPWLANSPWQAP 263
           S  AA  G   P    +PW++ + W +P
Sbjct: 117 SQPAAPGGQPIPDIPRYPWMSITDWMSP 144


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = +3

Query: 180 SGTAAVEGTAAPASVTWPWLANSPWQAP 263
           S  AA  G   P    +PW++ + W +P
Sbjct: 176 SQPAAPGGQPIPDIPRYPWMSITDWMSP 203


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = -3

Query: 339  ETEPTAQAGPANSTAPMTGTCPVT 268
            E  P A +  A ST PM    PVT
Sbjct: 2283 ECHPDASSTMAPSTTPMVPDKPVT 2306


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +3

Query: 30  QICLNLLSSYSAFKFVLYKMCTVS 101
           + CLN+LS ++    +LY + T +
Sbjct: 318 RFCLNILSIFTYVPMILYCVYTTA 341


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +3

Query: 30  QICLNLLSSYSAFKFVLYKMCTVS 101
           + CLN+LS ++    +LY + T +
Sbjct: 43  RFCLNILSIFTYVPMILYCVYTTA 66


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = -3

Query: 378 PPHPQVGPHAPEMETEP 328
           P  P  G H PE+ + P
Sbjct: 698 PNFPTCGDHVPEINSNP 714


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -2

Query: 379 TAASAGGSACARDGDRTDSAGRTRELD 299
           T  + GG A + D   ++ A R  E+D
Sbjct: 695 TEDAQGGDAPSADAAESEDASRMEEVD 721


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 20.6 bits (41), Expect = 7.6
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = +2

Query: 23  KQPNMSKLVVFLFCIQVCFIQN 88
           K PN  K++    C+Q+ + +N
Sbjct: 315 KNPNFDKMIGNPICVQIPWDKN 336


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,565
Number of Sequences: 336
Number of extensions: 1909
Number of successful extensions: 17
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10931752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)