BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10a11
(470 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ... 30 0.047
AY578805-1|AAT07310.1| 753|Anopheles gambiae medea protein. 27 0.44
AB097148-1|BAC82627.1| 357|Anopheles gambiae gag-like protein p... 26 0.76
U42429-1|AAB54088.1| 596|Anopheles gambiae engrailed protein. 25 1.3
U42214-1|AAB58461.1| 596|Anopheles gambiae engrailed protein. 25 1.3
CR954257-1|CAJ14152.1| 324|Anopheles gambiae putative dodecenoy... 25 1.3
AY347952-1|AAR28375.1| 634|Anopheles gambiae putative sulfakini... 25 1.8
AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubu... 24 2.3
AY344832-1|AAR05803.1| 333|Anopheles gambiae ICHIT protein. 24 3.1
AY344831-1|AAR05802.1| 333|Anopheles gambiae ICHIT protein. 24 3.1
AJ010903-1|CAA09389.1| 373|Anopheles gambiae ICHIT protein prot... 24 3.1
AY344835-1|AAR05806.1| 334|Anopheles gambiae ICHIT protein. 23 4.1
AY344834-1|AAR05805.1| 334|Anopheles gambiae ICHIT protein. 23 4.1
AY344833-1|AAR05804.1| 334|Anopheles gambiae ICHIT protein. 23 4.1
AY344830-1|AAR05801.1| 334|Anopheles gambiae ICHIT protein. 23 4.1
AY344829-1|AAR05800.1| 334|Anopheles gambiae ICHIT protein. 23 4.1
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 23 4.1
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi... 23 7.1
AJ441131-5|CAD29634.1| 574|Anopheles gambiae putative Na+ chann... 22 9.4
AJ439398-4|CAD28127.1| 572|Anopheles gambiae putative sodium ch... 22 9.4
AJ439060-1|CAD27752.1| 763|Anopheles gambiae hypothetical prote... 22 9.4
AJ438610-9|CAD27481.1| 763|Anopheles gambiae hypothetical prote... 22 9.4
>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
chain protein.
Length = 1024
Score = 29.9 bits (64), Expect = 0.047
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = +2
Query: 233 VAGELPVAGSTGVTGQVPVIGAVEFAGPACAVGSVSISGACGP 361
V G++ V G GV G G GP C G +G GP
Sbjct: 374 VKGDMGVPGFPGVKGDKGTTGLPGIPGPPCVDGLPGAAGPVGP 416
Score = 24.6 bits (51), Expect = 1.8
Identities = 17/49 (34%), Positives = 19/49 (38%)
Frame = +2
Query: 239 GELPVAGSTGVTGQVPVIGAVEFAGPACAVGSVSISGACGPTCGCGGSP 385
GE+ G TG G GA GP G G GP G G+P
Sbjct: 30 GEMGEQGRTGAQGNAGPPGAPGPVGPRGLTGHRGEKGNSGPV-GPPGAP 77
Score = 23.8 bits (49), Expect = 3.1
Identities = 11/37 (29%), Positives = 17/37 (45%)
Frame = +2
Query: 251 VAGSTGVTGQVPVIGAVEFAGPACAVGSVSISGACGP 361
++G G G++ + G GPA G + G GP
Sbjct: 498 LSGEAGAKGEMGIQGLPGLPGPAGLNGLPGMKGDMGP 534
>AY578805-1|AAT07310.1| 753|Anopheles gambiae medea protein.
Length = 753
Score = 26.6 bits (56), Expect = 0.44
Identities = 11/29 (37%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = -3
Query: 348 PEMETEP-TAQAGPANSTAPMTGTCPVTP 265
P M +P T GPA+ + ++ T PV+P
Sbjct: 346 PSMGNDPQTGMGGPASMSGSLSATSPVSP 374
>AB097148-1|BAC82627.1| 357|Anopheles gambiae gag-like protein
protein.
Length = 357
Score = 25.8 bits (54), Expect = 0.76
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 5/46 (10%)
Frame = -3
Query: 351 APEMETEPTAQAGPANSTA-----PMTGTCPVTPVEPATGSSPATA 229
AP T A A P + A P T + P+ +PA ++PATA
Sbjct: 228 APAAATAHAATASPVATAALAAGAPATVSTPMDKDDPAAAAAPATA 273
Score = 23.4 bits (48), Expect = 4.1
Identities = 12/38 (31%), Positives = 14/38 (36%)
Frame = -3
Query: 351 APEMETEPTAQAGPANSTAPMTGTCPVTPVEPATGSSP 238
A + T A PA + PM P PAT P
Sbjct: 239 ASPVATAALAAGAPATVSTPMDKDDPAAAAAPATAEVP 276
>U42429-1|AAB54088.1| 596|Anopheles gambiae engrailed protein.
Length = 596
Score = 25.0 bits (52), Expect = 1.3
Identities = 10/32 (31%), Positives = 14/32 (43%)
Frame = -3
Query: 381 EPPHPQVGPHAPEMETEPTAQAGPANSTAPMT 286
+PPH PH ++ P Q P +P T
Sbjct: 90 QPPHHHQHPHHHQLPHHPHHQHHPQQQPSPQT 121
>U42214-1|AAB58461.1| 596|Anopheles gambiae engrailed protein.
Length = 596
Score = 25.0 bits (52), Expect = 1.3
Identities = 10/32 (31%), Positives = 14/32 (43%)
Frame = -3
Query: 381 EPPHPQVGPHAPEMETEPTAQAGPANSTAPMT 286
+PPH PH ++ P Q P +P T
Sbjct: 90 QPPHHHQHPHHHQLPHHPHHQHHPQQQPSPQT 121
>CR954257-1|CAJ14152.1| 324|Anopheles gambiae putative
dodecenoylCoA deltaisomerase protein.
Length = 324
Score = 25.0 bits (52), Expect = 1.3
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +3
Query: 357 DPPADAAVLHSISNLYC 407
DP AD VLH I +C
Sbjct: 87 DPKADVGVLHGIGGSFC 103
>AY347952-1|AAR28375.1| 634|Anopheles gambiae putative sulfakinin
GPCR protein.
Length = 634
Score = 24.6 bits (51), Expect = 1.8
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +1
Query: 262 HRCNGTGARHRRGRVRG 312
H C G G R GR+RG
Sbjct: 440 HYCGGAGCETRPGRLRG 456
Score = 22.6 bits (46), Expect = 7.1
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = +2
Query: 341 ISGACGPTCGCGGSPFY*QSIL*IIKCYFNHI 436
IS C P C + + Q+ L + CY N +
Sbjct: 514 ISSCCNPITYCFMNRRFRQAFLGVFSCYRNRM 545
>AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubule
binding protein protein.
Length = 838
Score = 24.2 bits (50), Expect = 2.3
Identities = 15/51 (29%), Positives = 20/51 (39%)
Frame = -3
Query: 387 NGEPPHPQVGPHAPEMETEPTAQAGPANSTAPMTGTCPVTPVEPATGSSPA 235
+G P VGP P M + A GP P P+ +P T P+
Sbjct: 287 SGGMPSGMVGPPRPPMPMQGGAPGGPPQGMRPNFYNRPMG--DPQTSRPPS 335
>AY344832-1|AAR05803.1| 333|Anopheles gambiae ICHIT protein.
Length = 333
Score = 23.8 bits (49), Expect = 3.1
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = -3
Query: 336 TEPTAQAGPANSTAP-MTGTCPVTPVEPATGSSPATAT 226
T +A P+ T P +T T PV +P T S+P T T
Sbjct: 135 TTTSAPTTPSQWTDPTITTTTPVW-TDPTTWSAPTTTT 171
Score = 23.0 bits (47), Expect = 5.4
Identities = 13/44 (29%), Positives = 16/44 (36%)
Frame = -3
Query: 357 PHAPEMETEPTAQAGPANSTAPMTGTCPVTPVEPATGSSPATAT 226
P P T+PT T P T + P T + P T T
Sbjct: 140 PTTPSQWTDPTITTTTPVWTDPTTWSAPTTTTTWSDQPPPPTTT 183
>AY344831-1|AAR05802.1| 333|Anopheles gambiae ICHIT protein.
Length = 333
Score = 23.8 bits (49), Expect = 3.1
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = -3
Query: 336 TEPTAQAGPANSTAP-MTGTCPVTPVEPATGSSPATAT 226
T +A P+ T P +T T PV +P T S+P T T
Sbjct: 135 TTTSAPTTPSQWTDPTITTTTPVW-TDPTTWSAPTTTT 171
Score = 23.0 bits (47), Expect = 5.4
Identities = 13/44 (29%), Positives = 16/44 (36%)
Frame = -3
Query: 357 PHAPEMETEPTAQAGPANSTAPMTGTCPVTPVEPATGSSPATAT 226
P P T+PT T P T + P T + P T T
Sbjct: 140 PTTPSQWTDPTITTTTPVWTDPTTWSAPTTTTTWSDQPPPPTTT 183
>AJ010903-1|CAA09389.1| 373|Anopheles gambiae ICHIT protein
protein.
Length = 373
Score = 23.8 bits (49), Expect = 3.1
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = -3
Query: 336 TEPTAQAGPANSTAP-MTGTCPVTPVEPATGSSPATAT 226
T +A P+ T P +T T PV +P T S+P T T
Sbjct: 136 TTTSAPTTPSQWTDPTITTTTPVW-TDPTTWSAPTTTT 172
Score = 23.0 bits (47), Expect = 5.4
Identities = 13/44 (29%), Positives = 16/44 (36%)
Frame = -3
Query: 357 PHAPEMETEPTAQAGPANSTAPMTGTCPVTPVEPATGSSPATAT 226
P P T+PT T P T + P T + P T T
Sbjct: 141 PTTPSQWTDPTITTTTPVWTDPTTWSAPTTTTTWSDQPPPPTTT 184
>AY344835-1|AAR05806.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 23.4 bits (48), Expect = 4.1
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = -3
Query: 336 TEPTAQAGPANSTAP-MTGTCPVTPVEPATGSSPATAT 226
T +A P+ T P +T T P+ +P T S+P T T
Sbjct: 136 TTTSAPTTPSQWTDPTITTTTPIW-TDPTTWSAPTTTT 172
Score = 23.0 bits (47), Expect = 5.4
Identities = 13/44 (29%), Positives = 16/44 (36%)
Frame = -3
Query: 357 PHAPEMETEPTAQAGPANSTAPMTGTCPVTPVEPATGSSPATAT 226
P P T+PT T P T + P T + P T T
Sbjct: 141 PTTPSQWTDPTITTTTPIWTDPTTWSAPTTTTTWSDQPPPPTTT 184
>AY344834-1|AAR05805.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 23.4 bits (48), Expect = 4.1
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = -3
Query: 336 TEPTAQAGPANSTAP-MTGTCPVTPVEPATGSSPATAT 226
T +A P+ T P +T T P+ +P T S+P T T
Sbjct: 136 TTTSAPTTPSQWTDPTITTTTPIW-TDPTTWSAPTTTT 172
Score = 23.0 bits (47), Expect = 5.4
Identities = 13/44 (29%), Positives = 16/44 (36%)
Frame = -3
Query: 357 PHAPEMETEPTAQAGPANSTAPMTGTCPVTPVEPATGSSPATAT 226
P P T+PT T P T + P T + P T T
Sbjct: 141 PTTPSQWTDPTITTTTPIWTDPTTWSAPTTTTTWSDQPPPPTTT 184
>AY344833-1|AAR05804.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 23.4 bits (48), Expect = 4.1
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = -3
Query: 336 TEPTAQAGPANSTAP-MTGTCPVTPVEPATGSSPATAT 226
T +A P+ T P +T T P+ +P T S+P T T
Sbjct: 136 TTTSAPTTPSQWTDPTITTTTPIW-TDPTTWSAPTTTT 172
Score = 23.0 bits (47), Expect = 5.4
Identities = 13/44 (29%), Positives = 16/44 (36%)
Frame = -3
Query: 357 PHAPEMETEPTAQAGPANSTAPMTGTCPVTPVEPATGSSPATAT 226
P P T+PT T P T + P T + P T T
Sbjct: 141 PTTPSQWTDPTITTTTPIWTDPTTWSAPTTTTTWSDQPPPPTTT 184
>AY344830-1|AAR05801.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 23.4 bits (48), Expect = 4.1
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = -3
Query: 336 TEPTAQAGPANSTAP-MTGTCPVTPVEPATGSSPATAT 226
T +A P+ T P +T T P+ +P T S+P T T
Sbjct: 136 TTTSAPTTPSQWTDPTITTTTPIW-TDPTTWSAPTTTT 172
Score = 23.0 bits (47), Expect = 5.4
Identities = 13/44 (29%), Positives = 16/44 (36%)
Frame = -3
Query: 357 PHAPEMETEPTAQAGPANSTAPMTGTCPVTPVEPATGSSPATAT 226
P P T+PT T P T + P T + P T T
Sbjct: 141 PTTPSQWTDPTITTTTPIWTDPTTWSAPTTTTTWSDQPRPPTTT 184
>AY344829-1|AAR05800.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 23.4 bits (48), Expect = 4.1
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = -3
Query: 336 TEPTAQAGPANSTAP-MTGTCPVTPVEPATGSSPATAT 226
T +A P+ T P +T T P+ +P T S+P T T
Sbjct: 136 TTTSAPTTPSQWTDPTITTTTPIW-TDPTTWSAPTTTT 172
Score = 23.0 bits (47), Expect = 5.4
Identities = 13/44 (29%), Positives = 16/44 (36%)
Frame = -3
Query: 357 PHAPEMETEPTAQAGPANSTAPMTGTCPVTPVEPATGSSPATAT 226
P P T+PT T P T + P T + P T T
Sbjct: 141 PTTPSQWTDPTITTTTPIWTDPTTWSAPTTTTTWSDQPRPPTTT 184
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 23.4 bits (48), Expect = 4.1
Identities = 14/46 (30%), Positives = 18/46 (39%)
Frame = -3
Query: 378 PPHPQVGPHAPEMETEPTAQAGPANSTAPMTGTCPVTPVEPATGSS 241
P H PH + + A S P T P +P+ AT SS
Sbjct: 719 PHHHLTSPHGAPLALTSSKSASTHPSPHPATRASPSSPI-VATSSS 763
>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
channel alpha subunitprotein.
Length = 2139
Score = 22.6 bits (46), Expect = 7.1
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -2
Query: 346 RDGDRTDSAGRTRELDRADDG 284
R G TD++G E+D D+G
Sbjct: 2008 RHGGGTDASGDDLEIDACDNG 2028
>AJ441131-5|CAD29634.1| 574|Anopheles gambiae putative Na+ channel
protein.
Length = 574
Score = 22.2 bits (45), Expect = 9.4
Identities = 11/39 (28%), Positives = 23/39 (58%)
Frame = +3
Query: 153 LSVGLDMVLSGTAAVEGTAAPASVTWPWLANSPWQAPPV 269
+++GL MVL A+ ++ +SV + + +SP + P +
Sbjct: 271 VAMGLAMVLDANASDYFCSSTSSVGFKIIFHSPSETPKI 309
>AJ439398-4|CAD28127.1| 572|Anopheles gambiae putative sodium
channel protein.
Length = 572
Score = 22.2 bits (45), Expect = 9.4
Identities = 11/39 (28%), Positives = 23/39 (58%)
Frame = +3
Query: 153 LSVGLDMVLSGTAAVEGTAAPASVTWPWLANSPWQAPPV 269
+++GL MVL A+ ++ +SV + + +SP + P +
Sbjct: 271 VAMGLAMVLDANASDYFCSSTSSVGFKIIFHSPSETPKI 309
>AJ439060-1|CAD27752.1| 763|Anopheles gambiae hypothetical protein
protein.
Length = 763
Score = 22.2 bits (45), Expect = 9.4
Identities = 12/40 (30%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = -3
Query: 357 PHAPEMETEPTAQAGPANSTAPMTGTCPVTPVEP-ATGSS 241
PH+ ++ Q ++++ T P T EP A GSS
Sbjct: 36 PHSSTSQSSRRPQHSSTSASSSSVPTLPTTSGEPRAAGSS 75
>AJ438610-9|CAD27481.1| 763|Anopheles gambiae hypothetical protein
protein.
Length = 763
Score = 22.2 bits (45), Expect = 9.4
Identities = 12/40 (30%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = -3
Query: 357 PHAPEMETEPTAQAGPANSTAPMTGTCPVTPVEP-ATGSS 241
PH+ ++ Q ++++ T P T EP A GSS
Sbjct: 36 PHSSTSQSSRRPQHSSTSASSSSVPTLPTTSGEPRAAGSS 75
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 466,840
Number of Sequences: 2352
Number of extensions: 7772
Number of successful extensions: 53
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 53
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 41245467
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -