Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10a11
(470 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 31 0.55
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 31 0.55
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 31 0.55
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 31 0.55
AF068714-4|AAK68676.1| 251|Caenorhabditis elegans Initiation fa... 31 0.55
AF068714-3|AAM22022.1| 250|Caenorhabditis elegans Initiation fa... 31 0.55
AF068714-2|AAC17807.1| 248|Caenorhabditis elegans Initiation fa... 31 0.55
Z66498-2|CAA91291.2| 419|Caenorhabditis elegans Hypothetical pr... 30 0.73
AC024805-16|AAK39336.1| 448|Caenorhabditis elegans Hypothetical... 29 1.3
Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical p... 29 1.7
Z82083-3|CAB04971.1| 756|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z81041-9|CAJ55253.1| 824|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z81041-8|CAB02784.1| 829|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z69904-4|CAA93779.1| 249|Caenorhabditis elegans Hypothetical pr... 29 2.2
U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical pr... 29 2.2
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 29 2.2
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 29 2.2
U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical pr... 29 2.2
AF106582-1|AAC78217.3| 1424|Caenorhabditis elegans Hypothetical ... 29 2.2
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 28 2.9
U50198-3|AAA91261.2| 503|Caenorhabditis elegans Hypothetical pr... 28 2.9
AL031635-4|CAA21043.2| 269|Caenorhabditis elegans Hypothetical ... 28 2.9
AF003148-5|AAB54209.3| 792|Caenorhabditis elegans Hypothetical ... 28 2.9
Z75539-2|CAA99844.2| 555|Caenorhabditis elegans Hypothetical pr... 28 3.9
U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical pr... 28 3.9
U32326-1|AAC46965.1| 555|Caenorhabditis elegans G protein signa... 28 3.9
AL117206-6|CAB60450.1| 734|Caenorhabditis elegans Hypothetical ... 28 3.9
AF047652-2|AAC04393.3| 256|Caenorhabditis elegans Collagen prot... 28 3.9
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 28 3.9
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 28 3.9
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 28 3.9
Z81593-10|CAI94504.1| 349|Caenorhabditis elegans Hypothetical p... 27 5.1
Z37983-4|CAA86057.1| 803|Caenorhabditis elegans Hypothetical pr... 27 5.1
Z81044-11|CAB02809.2| 476|Caenorhabditis elegans Hypothetical p... 27 6.8
Z81037-4|CAB02747.2| 391|Caenorhabditis elegans Hypothetical pr... 27 6.8
U89245-1|AAB49459.1| 612|Caenorhabditis elegans transcription f... 27 6.8
U88308-17|AAK68214.1| 657|Caenorhabditis elegans Uncoordinated ... 27 6.8
AF003141-10|AAK21487.1| 612|Caenorhabditis elegans Uncoordinate... 27 6.8
AF001272-1|AAB84235.1| 612|Caenorhabditis elegans enhancer of s... 27 6.8
AF001271-1|AAB84234.1| 612|Caenorhabditis elegans enhancer of s... 27 6.8
Z81495-7|CAB04060.1| 444|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z77662-5|CAB01192.2| 579|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z73978-3|CAA98293.1| 501|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z47809-8|CAH10845.1| 968|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z47809-6|CAD57700.1| 1124|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z47809-5|CAD57699.1| 1019|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z47809-4|CAA87782.1| 1016|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z36719-11|CAH04695.1| 968|Caenorhabditis elegans Hypothetical p... 27 9.0
Z36719-10|CAD57686.1| 1124|Caenorhabditis elegans Hypothetical p... 27 9.0
Z36719-9|CAD57685.1| 1019|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z36719-8|CAA85318.1| 1016|Caenorhabditis elegans Hypothetical pr... 27 9.0
U86640-1|AAB47273.1| 1016|Caenorhabditis elegans MEL-11 protein. 27 9.0
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 27 9.0
U40959-6|AAA81770.1| 95|Caenorhabditis elegans Hypothetical pr... 27 9.0
U40798-6|AAA81476.1| 1003|Caenorhabditis elegans Temporarily ass... 27 9.0
AC025723-4|AAK29933.2| 1335|Caenorhabditis elegans Rab connectin... 27 9.0
AC006630-3|AAK68325.1| 257|Caenorhabditis elegans Hypothetical ... 27 9.0
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 30.7 bits (66), Expect = 0.55
Identities = 19/56 (33%), Positives = 22/56 (39%), Gaps = 3/56 (5%)
Frame = -3
Query: 387 NGEPPHPQVGPHAPEMETEPTAQAGPANSTAPMTGTC-PVT--PVEPATGSSPATA 229
N PP P P P +P A P N + C PVT P +P G P A
Sbjct: 103 NPGPPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPA 158
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 30.7 bits (66), Expect = 0.55
Identities = 19/56 (33%), Positives = 22/56 (39%), Gaps = 3/56 (5%)
Frame = -3
Query: 387 NGEPPHPQVGPHAPEMETEPTAQAGPANSTAPMTGTC-PVT--PVEPATGSSPATA 229
N PP P P P +P A P N + C PVT P +P G P A
Sbjct: 103 NPGPPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPA 158
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 30.7 bits (66), Expect = 0.55
Identities = 19/56 (33%), Positives = 22/56 (39%), Gaps = 3/56 (5%)
Frame = -3
Query: 387 NGEPPHPQVGPHAPEMETEPTAQAGPANSTAPMTGTC-PVT--PVEPATGSSPATA 229
N PP P P P +P A P N + C PVT P +P G P A
Sbjct: 103 NPGPPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPA 158
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 30.7 bits (66), Expect = 0.55
Identities = 19/56 (33%), Positives = 22/56 (39%), Gaps = 3/56 (5%)
Frame = -3
Query: 387 NGEPPHPQVGPHAPEMETEPTAQAGPANSTAPMTGTC-PVT--PVEPATGSSPATA 229
N PP P P P +P A P N + C PVT P +P G P A
Sbjct: 103 NPGPPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPA 158
>AF068714-4|AAK68676.1| 251|Caenorhabditis elegans Initiation
factor 4e (eif4e) familyprotein 3, isoform b protein.
Length = 251
Score = 30.7 bits (66), Expect = 0.55
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = -3
Query: 330 PTAQAGPANSTAPMTGTCPVTPVEPATGSSPATAT 226
P P P T P P ATG+SPAT T
Sbjct: 216 PAKDPAPVKEKGPAATTSPSNPGTEATGTSPATPT 250
Score = 29.5 bits (63), Expect = 1.3
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -3
Query: 351 APEMETEPTAQAGPANSTAPMTGTCPVTP 265
AP E P A P+N TGT P TP
Sbjct: 221 APVKEKGPAATTSPSNPGTEATGTSPATP 249
>AF068714-3|AAM22022.1| 250|Caenorhabditis elegans Initiation
factor 4e (eif4e) familyprotein 3, isoform c protein.
Length = 250
Score = 30.7 bits (66), Expect = 0.55
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = -3
Query: 330 PTAQAGPANSTAPMTGTCPVTPVEPATGSSPATAT 226
P P P T P P ATG+SPAT T
Sbjct: 215 PAKDPAPVKEKGPAATTSPSNPGTEATGTSPATPT 249
Score = 29.5 bits (63), Expect = 1.3
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -3
Query: 351 APEMETEPTAQAGPANSTAPMTGTCPVTP 265
AP E P A P+N TGT P TP
Sbjct: 220 APVKEKGPAATTSPSNPGTEATGTSPATP 248
>AF068714-2|AAC17807.1| 248|Caenorhabditis elegans Initiation
factor 4e (eif4e) familyprotein 3, isoform a protein.
Length = 248
Score = 30.7 bits (66), Expect = 0.55
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = -3
Query: 330 PTAQAGPANSTAPMTGTCPVTPVEPATGSSPATAT 226
P P P T P P ATG+SPAT T
Sbjct: 213 PAKDPAPVKEKGPAATTSPSNPGTEATGTSPATPT 247
Score = 29.5 bits (63), Expect = 1.3
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -3
Query: 351 APEMETEPTAQAGPANSTAPMTGTCPVTP 265
AP E P A P+N TGT P TP
Sbjct: 218 APVKEKGPAATTSPSNPGTEATGTSPATP 246
>Z66498-2|CAA91291.2| 419|Caenorhabditis elegans Hypothetical
protein M195.2 protein.
Length = 419
Score = 30.3 bits (65), Expect = 0.73
Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Frame = -3
Query: 369 PQVGPHAPEMETEPTAQAGPANSTAPMTGTCPVTPVEP--ATGSSPATATL 223
PQV ++ ++ T P+A PA+S P+ + P++P +T SSP+ +L
Sbjct: 370 PQVQRNSAQLFT-PSADQAPASSAQPIKINISLAPLKPSASTSSSPSPTSL 419
>AC024805-16|AAK39336.1| 448|Caenorhabditis elegans Hypothetical
protein Y51H7C.1 protein.
Length = 448
Score = 29.5 bits (63), Expect = 1.3
Identities = 16/45 (35%), Positives = 17/45 (37%)
Frame = -3
Query: 360 GPHAPEMETEPTAQAGPANSTAPMTGTCPVTPVEPATGSSPATAT 226
GP P GP P T P P+ P G PATAT
Sbjct: 365 GPVRPPTTASTPKPNGPEVPVNPGRPTHPAYPIVPTRGYPPATAT 409
>Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical
protein Y49E10.29 protein.
Length = 559
Score = 29.1 bits (62), Expect = 1.7
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 4/51 (7%)
Frame = -3
Query: 378 PPHPQVGPHAPEMETEPTAQ----AGPANSTAPMTGTCPVTPVEPATGSSP 238
PP P P P + +P Q A P + +AP+ P TP + A+ P
Sbjct: 414 PPKPTPSPAPPAQKAQPVTQQQASAPPTSPSAPVQA--PNTPTQKASSQDP 462
>Z82083-3|CAB04971.1| 756|Caenorhabditis elegans Hypothetical
protein ZK1010.5 protein.
Length = 756
Score = 29.1 bits (62), Expect = 1.7
Identities = 19/51 (37%), Positives = 21/51 (41%)
Frame = -3
Query: 378 PPHPQVGPHAPEMETEPTAQAGPANSTAPMTGTCPVTPVEPATGSSPATAT 226
PP+P VG P EP A T P PV V+PAT P T
Sbjct: 308 PPNPPVGISGPATSEEPNNTT--AAPTVPT--DLPVVFVDPATSQEPNDTT 354
>Z81041-9|CAJ55253.1| 824|Caenorhabditis elegans Hypothetical
protein C27A7.1b protein.
Length = 824
Score = 28.7 bits (61), Expect = 2.2
Identities = 12/46 (26%), Positives = 21/46 (45%)
Frame = -3
Query: 375 PHPQVGPHAPEMETEPTAQAGPANSTAPMTGTCPVTPVEPATGSSP 238
P Q+GP + P GP+ +T G P++P+ ++P
Sbjct: 100 PLEQLGPTLERLSNMPGFPMGPSPTTQTPPGVPPISPIVTGPNTTP 145
>Z81041-8|CAB02784.1| 829|Caenorhabditis elegans Hypothetical
protein C27A7.1a protein.
Length = 829
Score = 28.7 bits (61), Expect = 2.2
Identities = 12/46 (26%), Positives = 21/46 (45%)
Frame = -3
Query: 375 PHPQVGPHAPEMETEPTAQAGPANSTAPMTGTCPVTPVEPATGSSP 238
P Q+GP + P GP+ +T G P++P+ ++P
Sbjct: 105 PLEQLGPTLERLSNMPGFPMGPSPTTQTPPGVPPISPIVTGPNTTP 150
>Z69904-4|CAA93779.1| 249|Caenorhabditis elegans Hypothetical
protein ZK20.4 protein.
Length = 249
Score = 28.7 bits (61), Expect = 2.2
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = -2
Query: 334 RTDSAGRTRELDRADDGHLSR 272
+T++AG +ELDRA+ G LSR
Sbjct: 163 KTNAAGEAKELDRAELGSLSR 183
>U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical
protein ZK180.5b protein.
Length = 497
Score = 28.7 bits (61), Expect = 2.2
Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Frame = -3
Query: 381 EP-PHPQVGPHAPEMETEPTAQAGPANSTAPMTGTCPVTPVEPATGSSPATA 229
EP P PQV P APE E +A P + P+ P E + TA
Sbjct: 398 EPAPQPQVIPQAPETFVETSAPVAPQVTEYPIPAAQTEAPEEESKPGYEQTA 449
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 28.7 bits (61), Expect = 2.2
Identities = 16/52 (30%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
Frame = -3
Query: 378 PPHPQVGPHAPEMETE-PTAQAGPANSTAPMTGTCPVTPVEPATGSSPATAT 226
P P P P + T PT +T T T TP P ++P+T T
Sbjct: 669 PTSPTTAPTVPPVTTTTPTTTTSTTTTTTTTTTTTQTTPTTPVV-TTPSTIT 719
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 28.7 bits (61), Expect = 2.2
Identities = 16/52 (30%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
Frame = -3
Query: 378 PPHPQVGPHAPEMETE-PTAQAGPANSTAPMTGTCPVTPVEPATGSSPATAT 226
P P P P + T PT +T T T TP P ++P+T T
Sbjct: 725 PTSPTTAPTVPPVTTTTPTTTTSTTTTTTTTTTTTQTTPTTPVV-TTPSTIT 775
>U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical
protein C12D12.1b protein.
Length = 648
Score = 28.7 bits (61), Expect = 2.2
Identities = 16/52 (30%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
Frame = -3
Query: 378 PPHPQVGPHAPEMETE-PTAQAGPANSTAPMTGTCPVTPVEPATGSSPATAT 226
P P P P + T PT +T T T TP P ++P+T T
Sbjct: 548 PTSPTTAPTVPPVTTTTPTTTTSTTTTTTTTTTTTQTTPTTPVV-TTPSTIT 598
>AF106582-1|AAC78217.3| 1424|Caenorhabditis elegans Hypothetical
protein W05F2.7 protein.
Length = 1424
Score = 28.7 bits (61), Expect = 2.2
Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +2
Query: 239 GELPVAGSTGVTGQVPVIGAVEFAGP-ACAVGSVSISGACGPT 364
G + GSTGVT PV GA F P + + +I G G T
Sbjct: 571 GTMGPMGSTGVTQASPVTGATGFTMPTGISQSTPAIGGTMGST 613
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 28.3 bits (60), Expect = 2.9
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = -3
Query: 336 TEPTAQAGPANSTAPMTGTCPVTPVEPATGSSPATAT 226
T PT PA +T+ T T P T + T + T T
Sbjct: 239 TTPTTTTTPATTTSETTTTTPTTTTQTTTKPTTTTTT 275
>U50198-3|AAA91261.2| 503|Caenorhabditis elegans Hypothetical
protein R04B3.3 protein.
Length = 503
Score = 28.3 bits (60), Expect = 2.9
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -3
Query: 375 PHPQVGPHAPEMETEPTAQAGPANSTA 295
P P+VGP E + PTA AG A + A
Sbjct: 46 PFPRVGPFRAEPQRGPTAAAGGAAAVA 72
>AL031635-4|CAA21043.2| 269|Caenorhabditis elegans Hypothetical
protein Y47D3B.6 protein.
Length = 269
Score = 28.3 bits (60), Expect = 2.9
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +2
Query: 227 VAVAGELPVAGSTGVTGQVPVIGAVEFAGPACAVGSVSISGAC 355
+ VA +PVA G PV A PAC G+V +G C
Sbjct: 211 IPVAPVIPVA--LGAPCAAPVAPVYASAAPACVPGAVCSAGVC 251
>AF003148-5|AAB54209.3| 792|Caenorhabditis elegans Hypothetical
protein F32B5.7 protein.
Length = 792
Score = 28.3 bits (60), Expect = 2.9
Identities = 13/24 (54%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Frame = +2
Query: 311 GPAC-AVGSVSISGACGPTCGCGG 379
G AC A G+ GACG GCGG
Sbjct: 761 GAACGACGACGACGACGGCGGCGG 784
>Z75539-2|CAA99844.2| 555|Caenorhabditis elegans Hypothetical
protein F28C1.2 protein.
Length = 555
Score = 27.9 bits (59), Expect = 3.9
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = -3
Query: 387 NGEPPHPQVGPHAPEMETEPTAQAGPANSTAPMTGTCPVTPV 262
N + P G +P + A AG A ++AP T T PVT +
Sbjct: 270 NDQEPSTSSGGESPSTSS---AAAGTATTSAPSTSTPPVTTI 308
>U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical
protein ZK180.5a protein.
Length = 542
Score = 27.9 bits (59), Expect = 3.9
Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = -3
Query: 381 EP-PHPQVGPHAPEMETEPTAQAGPANSTAPMTGTCPVTPVE 259
EP P PQV P APE E +A P + P+ P E
Sbjct: 398 EPAPQPQVIPQAPETFVETSAPVAPQVTEYPIPAAQTEAPEE 439
>U32326-1|AAC46965.1| 555|Caenorhabditis elegans G protein
signaling regulator protein.
Length = 555
Score = 27.9 bits (59), Expect = 3.9
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = -3
Query: 387 NGEPPHPQVGPHAPEMETEPTAQAGPANSTAPMTGTCPVTPV 262
N + P G +P + A AG A ++AP T T PVT +
Sbjct: 270 NDQEPSTSSGGESPSTSS---AAAGTATTSAPSTSTPPVTTI 308
>AL117206-6|CAB60450.1| 734|Caenorhabditis elegans Hypothetical
protein Y67A10A.9 protein.
Length = 734
Score = 27.9 bits (59), Expect = 3.9
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -3
Query: 342 METEPTAQAGPANSTAPMTGTCPVTPVEP 256
M T+ T Q TAP CPV P +P
Sbjct: 352 MNTQMTQQTRDTTQTAPAAVACPVPPGKP 380
>AF047652-2|AAC04393.3| 256|Caenorhabditis elegans Collagen protein
107, isoform a protein.
Length = 256
Score = 27.9 bits (59), Expect = 3.9
Identities = 18/48 (37%), Positives = 21/48 (43%)
Frame = +2
Query: 236 AGELPVAGSTGVTGQVPVIGAVEFAGPACAVGSVSISGACGPTCGCGG 379
AGE AG+ G G+ G GPA A G +GA G GG
Sbjct: 172 AGEQGDAGAAGQDGEAGAPGNAGSEGPAGAPGKDGEAGAPGQDGEAGG 219
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 27.9 bits (59), Expect = 3.9
Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 4/53 (7%)
Frame = -3
Query: 384 GEPPHPQVG-PHAPEMETEPTAQAGPANSTAPMTGTCPVTPV---EPATGSSP 238
G PP P+ G P P + P AG + P G+ P P P TGS P
Sbjct: 262 GSPPPPRTGSPPPPPTGSPPPPPAG-GSPPPPRAGSPPPPPPPRGSPPTGSLP 313
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 27.9 bits (59), Expect = 3.9
Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 4/53 (7%)
Frame = -3
Query: 384 GEPPHPQVG-PHAPEMETEPTAQAGPANSTAPMTGTCPVTPV---EPATGSSP 238
G PP P+ G P P + P AG + P G+ P P P TGS P
Sbjct: 283 GSPPPPRTGSPPPPPTGSPPPPPAG-GSPPPPRAGSPPPPPPPRGSPPTGSLP 334
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 27.9 bits (59), Expect = 3.9
Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 4/53 (7%)
Frame = -3
Query: 384 GEPPHPQVG-PHAPEMETEPTAQAGPANSTAPMTGTCPVTPV---EPATGSSP 238
G PP P+ G P P + P AG + P G+ P P P TGS P
Sbjct: 268 GSPPPPRTGSPPPPPTGSPPPPPAG-GSPPPPRAGSPPPPPPPRGSPPTGSLP 319
>Z81593-10|CAI94504.1| 349|Caenorhabditis elegans Hypothetical
protein T20B3.15 protein.
Length = 349
Score = 27.5 bits (58), Expect = 5.1
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -3
Query: 333 EPTAQAGPANSTAPMTGTCPVTPVEPATGSSPATATL 223
+PT + A S+ T T P+T + P + P ++TL
Sbjct: 59 QPTCETEIALSSTLPTSTLPITTIGPKSSQIPISSTL 95
>Z37983-4|CAA86057.1| 803|Caenorhabditis elegans Hypothetical
protein B0393.4 protein.
Length = 803
Score = 27.5 bits (58), Expect = 5.1
Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = -3
Query: 387 NGEPPHPQVGPH--APEMETEPTAQAGPANSTAPMTGTCPVTPVEPATGS 244
N P P+V PE EP + P ++ P++ PV EPA+ S
Sbjct: 100 NSTPQVPKVAVTLPVPEPVPEPVPEPVPESTPEPISEPLPVVQEEPASDS 149
>Z81044-11|CAB02809.2| 476|Caenorhabditis elegans Hypothetical
protein C30H6.4 protein.
Length = 476
Score = 27.1 bits (57), Expect = 6.8
Identities = 13/37 (35%), Positives = 16/37 (43%)
Frame = -3
Query: 336 TEPTAQAGPANSTAPMTGTCPVTPVEPATGSSPATAT 226
TEPT +T M T P T P T S+ T +
Sbjct: 299 TEPTTSTSTPTTTTTMQTTTPSTTSTPTTTSTTTTTS 335
>Z81037-4|CAB02747.2| 391|Caenorhabditis elegans Hypothetical
protein C17E4.6 protein.
Length = 391
Score = 27.1 bits (57), Expect = 6.8
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = -3
Query: 375 PHPQVGPHAPEMETEPTAQAGPANSTAPMTGTCPVTPVEPATGSSPATAT 226
P PQ+ P P + T GP S + + +T + +T S+P T T
Sbjct: 347 PSPQISPRVPLLTT------GPITSGPLVASSAGLTVMATSTSSAPKTTT 390
>U89245-1|AAB49459.1| 612|Caenorhabditis elegans transcription
factor UNC-37 protein.
Length = 612
Score = 27.1 bits (57), Expect = 6.8
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = -2
Query: 370 SAGGSACARDGDRTDSAGRTRELDRADDGHLSRYTGGACHGEFA--SHGHVTDAGAAVPS 197
S+GG++ A+ D E+D +D H S + G + S V +GA+ PS
Sbjct: 157 SSGGASEAKKAKLEDPDDGELEIDVTNDDHPSTASNGGAANKNGRDSTNSVASSGASTPS 216
Query: 196 TAA 188
A+
Sbjct: 217 IAS 219
>U88308-17|AAK68214.1| 657|Caenorhabditis elegans Uncoordinated
protein 11, isoform c protein.
Length = 657
Score = 27.1 bits (57), Expect = 6.8
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Frame = -3
Query: 381 EPPHPQV-GPHAPEMETEPTAQAGPANSTAPMTGTCPVTP-VEP-ATGSSPA 235
EP +P + P AP+M P PA+ AP P+ P +P AT +S A
Sbjct: 460 EPENPFITAPAAPQMHNAPPVPPPPASQGAP----APINPFADPSATAASSA 507
>AF003141-10|AAK21487.1| 612|Caenorhabditis elegans Uncoordinated
protein 37 protein.
Length = 612
Score = 27.1 bits (57), Expect = 6.8
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = -2
Query: 370 SAGGSACARDGDRTDSAGRTRELDRADDGHLSRYTGGACHGEFA--SHGHVTDAGAAVPS 197
S+GG++ A+ D E+D +D H S + G + S V +GA+ PS
Sbjct: 157 SSGGASEAKKAKLEDPDDGELEIDVTNDDHPSTASNGGAANKNGRDSTNSVASSGASTPS 216
Query: 196 TAA 188
A+
Sbjct: 217 IAS 219
>AF001272-1|AAB84235.1| 612|Caenorhabditis elegans enhancer of
split groucho protein.
Length = 612
Score = 27.1 bits (57), Expect = 6.8
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = -2
Query: 370 SAGGSACARDGDRTDSAGRTRELDRADDGHLSRYTGGACHGEFA--SHGHVTDAGAAVPS 197
S+GG++ A+ D E+D +D H S + G + S V +GA+ PS
Sbjct: 157 SSGGASEAKKAKLEDPDDGELEIDVTNDDHPSTASNGGAANKNGRDSTNSVASSGASTPS 216
Query: 196 TAA 188
A+
Sbjct: 217 IAS 219
>AF001271-1|AAB84234.1| 612|Caenorhabditis elegans enhancer of
split groucho protein.
Length = 612
Score = 27.1 bits (57), Expect = 6.8
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = -2
Query: 370 SAGGSACARDGDRTDSAGRTRELDRADDGHLSRYTGGACHGEFA--SHGHVTDAGAAVPS 197
S+GG++ A+ D E+D +D H S + G + S V +GA+ PS
Sbjct: 157 SSGGASEAKKAKLEDPDDGELEIDVTNDDHPSTASNGGAANKNGRDSTNSVASSGASTPS 216
Query: 196 TAA 188
A+
Sbjct: 217 IAS 219
>Z81495-7|CAB04060.1| 444|Caenorhabditis elegans Hypothetical
protein F08G2.7 protein.
Length = 444
Score = 26.6 bits (56), Expect = 9.0
Identities = 13/49 (26%), Positives = 18/49 (36%)
Frame = -3
Query: 384 GEPPHPQVGPHAPEMETEPTAQAGPANSTAPMTGTCPVTPVEPATGSSP 238
G P HP + P T G S P + + P+ PA + P
Sbjct: 293 GAPMHPISSSNTPTTSGMDTTHGGAGESLVPASDVSYLAPLVPAPPTLP 341
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 26.6 bits (56), Expect = 9.0
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 314 PACAVGSVSISGACGPTCGCGG 379
PAC G G CG CG GG
Sbjct: 116 PACGGGCGGGGGGCGGGCGGGG 137
>Z77662-5|CAB01192.2| 579|Caenorhabditis elegans Hypothetical
protein F47B8.5 protein.
Length = 579
Score = 26.6 bits (56), Expect = 9.0
Identities = 17/41 (41%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Frame = -3
Query: 345 EMETEPTAQAGPANSTAPMTGTCP-VTPV-EPATGSSPATA 229
E E P A A PA + AP P P EPA +PA A
Sbjct: 472 EGEAAPAAPAEPAPAPAPAPAPAPEAAPAPEPAPAPAPAPA 512
>Z73978-3|CAA98293.1| 501|Caenorhabditis elegans Hypothetical
protein ZC302.2a protein.
Length = 501
Score = 26.6 bits (56), Expect = 9.0
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Frame = -3
Query: 360 GPHAPEMETEPTAQ---AGPANSTAPMTGTCPVTPVEPATGSSPATATL 223
GP AP + T+PT+ A P + AP T + +T +P G T+
Sbjct: 162 GPIAPSITTKPTSTIQVAPPRDPVAPTTSSSGITK-KPENGEFSLVKTI 209
>Z47809-8|CAH10845.1| 968|Caenorhabditis elegans Hypothetical
protein C06C3.1d protein.
Length = 968
Score = 26.6 bits (56), Expect = 9.0
Identities = 19/49 (38%), Positives = 23/49 (46%)
Frame = -3
Query: 372 HPQVGPHAPEMETEPTAQAGPANSTAPMTGTCPVTPVEPATGSSPATAT 226
H Q+ + T TA P +ST P T PV+ V AT SS A T
Sbjct: 594 HSQLSFPSVSNTTTTTATVAPTSSTVPST---PVSNVMAATISSTAKNT 639
>Z47809-6|CAD57700.1| 1124|Caenorhabditis elegans Hypothetical
protein C06C3.1c protein.
Length = 1124
Score = 26.6 bits (56), Expect = 9.0
Identities = 19/49 (38%), Positives = 23/49 (46%)
Frame = -3
Query: 372 HPQVGPHAPEMETEPTAQAGPANSTAPMTGTCPVTPVEPATGSSPATAT 226
H Q+ + T TA P +ST P T PV+ V AT SS A T
Sbjct: 594 HSQLSFPSVSNTTTTTATVAPTSSTVPST---PVSNVMAATISSTAKNT 639
>Z47809-5|CAD57699.1| 1019|Caenorhabditis elegans Hypothetical
protein C06C3.1b protein.
Length = 1019
Score = 26.6 bits (56), Expect = 9.0
Identities = 19/49 (38%), Positives = 23/49 (46%)
Frame = -3
Query: 372 HPQVGPHAPEMETEPTAQAGPANSTAPMTGTCPVTPVEPATGSSPATAT 226
H Q+ + T TA P +ST P T PV+ V AT SS A T
Sbjct: 597 HSQLSFPSVSNTTTTTATVAPTSSTVPST---PVSNVMAATISSTAKNT 642
>Z47809-4|CAA87782.1| 1016|Caenorhabditis elegans Hypothetical
protein C06C3.1a protein.
Length = 1016
Score = 26.6 bits (56), Expect = 9.0
Identities = 19/49 (38%), Positives = 23/49 (46%)
Frame = -3
Query: 372 HPQVGPHAPEMETEPTAQAGPANSTAPMTGTCPVTPVEPATGSSPATAT 226
H Q+ + T TA P +ST P T PV+ V AT SS A T
Sbjct: 594 HSQLSFPSVSNTTTTTATVAPTSSTVPST---PVSNVMAATISSTAKNT 639
>Z36719-11|CAH04695.1| 968|Caenorhabditis elegans Hypothetical
protein C06C3.1d protein.
Length = 968
Score = 26.6 bits (56), Expect = 9.0
Identities = 19/49 (38%), Positives = 23/49 (46%)
Frame = -3
Query: 372 HPQVGPHAPEMETEPTAQAGPANSTAPMTGTCPVTPVEPATGSSPATAT 226
H Q+ + T TA P +ST P T PV+ V AT SS A T
Sbjct: 594 HSQLSFPSVSNTTTTTATVAPTSSTVPST---PVSNVMAATISSTAKNT 639
>Z36719-10|CAD57686.1| 1124|Caenorhabditis elegans Hypothetical
protein C06C3.1c protein.
Length = 1124
Score = 26.6 bits (56), Expect = 9.0
Identities = 19/49 (38%), Positives = 23/49 (46%)
Frame = -3
Query: 372 HPQVGPHAPEMETEPTAQAGPANSTAPMTGTCPVTPVEPATGSSPATAT 226
H Q+ + T TA P +ST P T PV+ V AT SS A T
Sbjct: 594 HSQLSFPSVSNTTTTTATVAPTSSTVPST---PVSNVMAATISSTAKNT 639
>Z36719-9|CAD57685.1| 1019|Caenorhabditis elegans Hypothetical
protein C06C3.1b protein.
Length = 1019
Score = 26.6 bits (56), Expect = 9.0
Identities = 19/49 (38%), Positives = 23/49 (46%)
Frame = -3
Query: 372 HPQVGPHAPEMETEPTAQAGPANSTAPMTGTCPVTPVEPATGSSPATAT 226
H Q+ + T TA P +ST P T PV+ V AT SS A T
Sbjct: 597 HSQLSFPSVSNTTTTTATVAPTSSTVPST---PVSNVMAATISSTAKNT 642
>Z36719-8|CAA85318.1| 1016|Caenorhabditis elegans Hypothetical
protein C06C3.1a protein.
Length = 1016
Score = 26.6 bits (56), Expect = 9.0
Identities = 19/49 (38%), Positives = 23/49 (46%)
Frame = -3
Query: 372 HPQVGPHAPEMETEPTAQAGPANSTAPMTGTCPVTPVEPATGSSPATAT 226
H Q+ + T TA P +ST P T PV+ V AT SS A T
Sbjct: 594 HSQLSFPSVSNTTTTTATVAPTSSTVPST---PVSNVMAATISSTAKNT 639
>U86640-1|AAB47273.1| 1016|Caenorhabditis elegans MEL-11 protein.
Length = 1016
Score = 26.6 bits (56), Expect = 9.0
Identities = 19/49 (38%), Positives = 23/49 (46%)
Frame = -3
Query: 372 HPQVGPHAPEMETEPTAQAGPANSTAPMTGTCPVTPVEPATGSSPATAT 226
H Q+ + T TA P +ST P T PV+ V AT SS A T
Sbjct: 594 HSQLSFPSVSNTTTTTATVAPTSSTVPST---PVSNVMAATISSTAKNT 639
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 26.6 bits (56), Expect = 9.0
Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 3/56 (5%)
Frame = -3
Query: 387 NGEPPHPQVGPHAPEMETEPTAQAG--PANSTAPMTGTCP-VTPVEPATGSSPATA 229
+ +PP P + + EP + AG A S AP G P TP S+ A A
Sbjct: 613 SNQPPTPASASASTTLHVEPASVAGGSQAGSRAPSAGPGPSATPDSSTIPSASAAA 668
>U40959-6|AAA81770.1| 95|Caenorhabditis elegans Hypothetical
protein B0310.6 protein.
Length = 95
Score = 26.6 bits (56), Expect = 9.0
Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 6/56 (10%)
Frame = +2
Query: 227 VAVAGE-LPVAGSTGVTGQVPV-IGAVEFAGPACAVGSVSISGA----CGPTCGCG 376
+AV GE LP + GQ V I A + G C G +++ CG CGCG
Sbjct: 39 LAVNGEELPT--DIALEGQSEVMIRAKRYYGCGCGCGCATVAAVSPVPCGGCCGCG 92
>U40798-6|AAA81476.1| 1003|Caenorhabditis elegans Temporarily
assigned gene nameprotein 158 protein.
Length = 1003
Score = 26.6 bits (56), Expect = 9.0
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = -2
Query: 466 FFIMYIQHFTYVIKITLNYLQYRLLIEWRTAASAGG 359
FFIM+ H+ Y I L L +EW+ A G
Sbjct: 536 FFIMFSTHWDYAIVACLLCLVIYKYVEWKGAKKEWG 571
>AC025723-4|AAK29933.2| 1335|Caenorhabditis elegans Rab connectin
related protein 2 protein.
Length = 1335
Score = 26.6 bits (56), Expect = 9.0
Identities = 16/35 (45%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = -3
Query: 330 PTAQ-AGPANSTAPMTGTCPVTPVEPATGSSPATA 229
PT Q + PA P T P VEP GS P TA
Sbjct: 952 PTVQPSAPAPPIPPRTKNAP-PDVEPVRGSEPPTA 985
>AC006630-3|AAK68325.1| 257|Caenorhabditis elegans Hypothetical
protein F14H12.3 protein.
Length = 257
Score = 26.6 bits (56), Expect = 9.0
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +2
Query: 308 AGPACAVGSVSISGACGPTCGCGGS 382
A P C + S AC TCG GGS
Sbjct: 136 AQPCCTWTAWSSWSACSVTCGSGGS 160
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,912,501
Number of Sequences: 27780
Number of extensions: 186739
Number of successful extensions: 1003
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 856
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 993
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 850313440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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