Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10a11
(470 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g18670.1 68417.m02762 leucine-rich repeat family protein / ex... 33 0.098
At4g11660.1 68417.m01864 heat shock factor protein 7 (HSF7) / he... 32 0.17
At3g28790.1 68416.m03593 expressed protein 31 0.30
At1g23540.1 68414.m02960 protein kinase family protein contains ... 31 0.52
At4g31370.1 68417.m04448 fasciclin-like arabinogalactan family p... 30 0.69
At2g43160.3 68415.m05361 epsin N-terminal homology (ENTH) domain... 30 0.91
At2g43160.2 68415.m05360 epsin N-terminal homology (ENTH) domain... 30 0.91
At2g43160.1 68415.m05359 epsin N-terminal homology (ENTH) domain... 30 0.91
At5g14920.1 68418.m01750 gibberellin-regulated family protein si... 29 1.2
At1g32560.1 68414.m04018 late embryogenesis abundant group 1 dom... 29 1.2
At5g24710.1 68418.m02919 WD-40 repeat family protein contains 3 ... 29 1.6
At4g36210.2 68417.m05152 expressed protein contains Pfam PF05277... 29 1.6
At4g36210.1 68417.m05151 expressed protein contains Pfam PF05277... 29 1.6
At4g27520.1 68417.m03952 plastocyanin-like domain-containing pro... 29 1.6
At2g45470.1 68415.m05655 fasciclin-like arabinogalactan-protein ... 29 2.1
At2g18100.1 68415.m02104 expressed protein 29 2.1
At1g20130.1 68414.m02518 family II extracellular lipase, putativ... 29 2.1
At5g58470.2 68418.m07323 zinc finger (Ran-binding) family protei... 28 2.8
At5g58470.1 68418.m07322 zinc finger (Ran-binding) family protei... 28 2.8
At5g53870.1 68418.m06701 plastocyanin-like domain-containing pro... 28 2.8
At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid t... 28 2.8
At1g35230.1 68414.m04369 arabinogalactan-protein (AGP5) identica... 28 2.8
At5g19900.1 68418.m02368 PRLI-interacting factor, putative stron... 28 3.7
At1g33680.1 68414.m04166 KH domain-containing protein similar to... 28 3.7
At3g28780.1 68416.m03592 glycine-rich protein similar to H41 gen... 27 6.4
At3g19430.1 68416.m02464 late embryogenesis abundant protein-rel... 27 6.4
At2g04550.1 68415.m00463 dual specificity protein phosphatase fa... 27 6.4
At1g50610.1 68414.m05685 leucine-rich repeat transmembrane prote... 27 6.4
At1g24267.1 68414.m03062 expressed protein 27 6.4
At4g16980.1 68417.m02560 arabinogalactan-protein family similar ... 27 8.5
At1g30020.1 68414.m03671 expressed protein contains Pfam profile... 27 8.5
>At4g18670.1 68417.m02762 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 839
Score = 33.1 bits (72), Expect = 0.098
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = -3
Query: 384 GEPPHPQVGPHAP-EMETEPTAQAGPANSTAPMTGTCPVTPV-EPATGSSPAT 232
G PP P + P P + + P+ P + +P + T P +P+ P T S+P T
Sbjct: 518 GSPPSPSISPSPPITVPSPPSTPTSPGSPPSPSSPT-PSSPIPSPPTPSTPPT 569
Score = 31.9 bits (69), Expect = 0.23
Identities = 19/64 (29%), Positives = 26/64 (40%), Gaps = 12/64 (18%)
Frame = -3
Query: 384 GEPPHPQVGPH----APEMETEPTAQAGPAN--------STAPMTGTCPVTPVEPATGSS 241
G PP P + P P T P+ P + ST P G+ P +P P G S
Sbjct: 421 GSPPSPSISPSPPITVPSPPTTPSPGGSPPSPSIVPSPPSTTPSPGSPPTSPTTPTPGGS 480
Query: 240 PATA 229
P ++
Sbjct: 481 PPSS 484
Score = 29.1 bits (62), Expect = 1.6
Identities = 13/46 (28%), Positives = 20/46 (43%)
Frame = -3
Query: 375 PHPQVGPHAPEMETEPTAQAGPANSTAPMTGTCPVTPVEPATGSSP 238
P P P +P P++ + +P T + P TP+ P S P
Sbjct: 534 PSPPSTPTSPGSPPSPSSPTPSSPIPSPPTPSTPPTPISPGQNSPP 579
>At4g11660.1 68417.m01864 heat shock factor protein 7 (HSF7) / heat
shock transcription factor 7 (HSTF7) identical to heat
shock factor protein 7 (HSF7) SP:Q9T0D3 from
[Arabidopsis thaliana]
Length = 377
Score = 32.3 bits (70), Expect = 0.17
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +2
Query: 272 TGQVPVIGAVEFAGPACAVGSVSISGACGPTCGCGGS 382
TG+ P + V G C+ G+ S CG G GGS
Sbjct: 6 TGETPTVAGVGGGGAGCSAGNSGGSSGCGAGGGGGGS 42
>At3g28790.1 68416.m03593 expressed protein
Length = 608
Score = 31.5 bits (68), Expect = 0.30
Identities = 17/65 (26%), Positives = 27/65 (41%)
Frame = -2
Query: 340 GDRTDSAGRTRELDRADDGHLSRYTGGACHGEFASHGHVTDAGAAVPSTAAVPDRTISRP 161
G ++ S+ +T+E+ G+ + T G+ G S PST T S P
Sbjct: 242 GSKSSSSAKTKEVSGGSSGNTYKDTTGSSSGASPSGSPTPTPSTPTPSTPTPSTPTPSTP 301
Query: 160 TERSP 146
T +P
Sbjct: 302 TPSTP 306
>At1g23540.1 68414.m02960 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 720
Score = 30.7 bits (66), Expect = 0.52
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -3
Query: 375 PHPQVGPHAPEMETEPTAQAGPANSTAPMTGTCPVTPVEP 256
P P VGP PE P Q+ PA + T + P +P++P
Sbjct: 138 PSPNVGPTNPE---SPPLQSPPAPPASDPTNSPPASPLDP 174
Score = 28.7 bits (61), Expect = 2.1
Identities = 15/52 (28%), Positives = 21/52 (40%)
Frame = -3
Query: 387 NGEPPHPQVGPHAPEMETEPTAQAGPANSTAPMTGTCPVTPVEPATGSSPAT 232
N PP + P + P+ GP N +P + P P T S PA+
Sbjct: 122 NNPPPSQDLQSPPP---SSPSPNVGPTNPESPPLQSPPAPPASDPTNSPPAS 170
>At4g31370.1 68417.m04448 fasciclin-like arabinogalactan family
protein similar to fasciclin-like
arabinogalactan-protein 1 [Arabidopsis thaliana]
gi|13377776|gb|AAK20857
Length = 278
Score = 30.3 bits (65), Expect = 0.69
Identities = 15/48 (31%), Positives = 19/48 (39%)
Frame = -3
Query: 378 PPHPQVGPHAPEMETEPTAQAGPANSTAPMTGTCPVTPVEPATGSSPA 235
PP+ V P+ M+ GPA P TP PAT + A
Sbjct: 183 PPYVHVAPYPTPMDASVVPAPGPAADDNSPDSAVPKTPPAPATDTPEA 230
>At2g43160.3 68415.m05361 epsin N-terminal homology (ENTH)
domain-containing protein contains Pfam PF01417: ENTH
domain. ENTH (Epsin N-terminal homology) domain; similar
to Af10-protein (GI:1724114) [Avena fatua]
Length = 895
Score = 29.9 bits (64), Expect = 0.91
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Frame = -2
Query: 349 ARDGDRTDSAGRTRELDRADDGHLSRYTGGACHGEFASHGH-VTDAGAAVPSTAAVPDRT 173
+R D S GR+ E +R DDGH S GA + + G + + A P
Sbjct: 234 SRSVDNYGSRGRSSEREREDDGHSSSRGSGARADDNSQDGRGGLQRKFSEQNIGAPPSYE 293
Query: 172 ISRPTERSPIWS*R 131
+ RSP++S R
Sbjct: 294 EAVSDSRSPVYSER 307
>At2g43160.2 68415.m05360 epsin N-terminal homology (ENTH)
domain-containing protein contains Pfam PF01417: ENTH
domain. ENTH (Epsin N-terminal homology) domain; similar
to Af10-protein (GI:1724114) [Avena fatua]
Length = 895
Score = 29.9 bits (64), Expect = 0.91
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Frame = -2
Query: 349 ARDGDRTDSAGRTRELDRADDGHLSRYTGGACHGEFASHGH-VTDAGAAVPSTAAVPDRT 173
+R D S GR+ E +R DDGH S GA + + G + + A P
Sbjct: 234 SRSVDNYGSRGRSSEREREDDGHSSSRGSGARADDNSQDGRGGLQRKFSEQNIGAPPSYE 293
Query: 172 ISRPTERSPIWS*R 131
+ RSP++S R
Sbjct: 294 EAVSDSRSPVYSER 307
>At2g43160.1 68415.m05359 epsin N-terminal homology (ENTH)
domain-containing protein contains Pfam PF01417: ENTH
domain. ENTH (Epsin N-terminal homology) domain; similar
to Af10-protein (GI:1724114) [Avena fatua]
Length = 895
Score = 29.9 bits (64), Expect = 0.91
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Frame = -2
Query: 349 ARDGDRTDSAGRTRELDRADDGHLSRYTGGACHGEFASHGH-VTDAGAAVPSTAAVPDRT 173
+R D S GR+ E +R DDGH S GA + + G + + A P
Sbjct: 234 SRSVDNYGSRGRSSEREREDDGHSSSRGSGARADDNSQDGRGGLQRKFSEQNIGAPPSYE 293
Query: 172 ISRPTERSPIWS*R 131
+ RSP++S R
Sbjct: 294 EAVSDSRSPVYSER 307
>At5g14920.1 68418.m01750 gibberellin-regulated family protein
similar to SP|P46689 Gibberellin-regulated protein 1
precursor {Arabidopsis thaliana}; contains Pfam profile
PF02704: Gibberellin regulated protein
Length = 275
Score = 29.5 bits (63), Expect = 1.2
Identities = 15/48 (31%), Positives = 20/48 (41%)
Frame = -3
Query: 375 PHPQVGPHAPEMETEPTAQAGPANSTAPMTGTCPVTPVEPATGSSPAT 232
P Q P P PT+ P +T P+ PV+P T + P T
Sbjct: 145 PPVQSPPVQPPTYKPPTSPVKPPTTTPPVKPPTTTPPVQPPTYNPPTT 192
Score = 28.7 bits (61), Expect = 2.1
Identities = 15/48 (31%), Positives = 20/48 (41%)
Frame = -3
Query: 381 EPPHPQVGPHAPEMETEPTAQAGPANSTAPMTGTCPVTPVEPATGSSP 238
+PP P V P PT + P T P +PV+P T + P
Sbjct: 125 KPPTPTVKPPTTSPVKPPTTPPVQSPPVQPPTYKPPTSPVKPPTTTPP 172
>At1g32560.1 68414.m04018 late embryogenesis abundant group 1
domain-containing protein / LEA group 1
domain-containing protein contains Pfam domain, PF03760:
Late embryogenesis abundant (LEA) group 1
Length = 134
Score = 29.5 bits (63), Expect = 1.2
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 5/63 (7%)
Frame = -2
Query: 355 ACARDGDRTDSAGRTRELDRADDGHLSRYTGGACHGEFA-----SHGHVTDAGAAVPSTA 191
A AR + + A + R+ A+ ++ + A H E SH HVTD G VP A
Sbjct: 33 AMARTKEEKEIAHQRRKAKEAE-ANMDMHMAKAAHAEDKLMAKQSHYHVTDHGPHVPQQA 91
Query: 190 AVP 182
VP
Sbjct: 92 PVP 94
>At5g24710.1 68418.m02919 WD-40 repeat family protein contains 3 Pfam
PF00400: WD domain, G-beta repeats;
Length = 1327
Score = 29.1 bits (62), Expect = 1.6
Identities = 20/49 (40%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = -3
Query: 369 PQVG-PHAPEMETEPTAQAGPANSTAPMTGTCPVTPVEPATGSSPATAT 226
P+V P A E T+P A P +S AP T + P T A SPA T
Sbjct: 1152 PEVAKPLALEEPTKPLAIEAPPSSEAPQTESAPET---AAAAESPAPET 1197
>At4g36210.2 68417.m05152 expressed protein contains Pfam PF05277:
Protein of unknown function (DUF726)
Length = 516
Score = 29.1 bits (62), Expect = 1.6
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +2
Query: 281 VPVIGAVEFAGPACAVGSVSISGACGPTCGCGGS 382
+PVIGA FA A A G+V+ S A + G G+
Sbjct: 235 IPVIGAGGFAAAASAAGTVAGSVAVAASFGAAGA 268
>At4g36210.1 68417.m05151 expressed protein contains Pfam PF05277:
Protein of unknown function (DUF726)
Length = 672
Score = 29.1 bits (62), Expect = 1.6
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +2
Query: 281 VPVIGAVEFAGPACAVGSVSISGACGPTCGCGGS 382
+PVIGA FA A A G+V+ S A + G G+
Sbjct: 357 IPVIGAGGFAAAASAAGTVAGSVAVAASFGAAGA 390
>At4g27520.1 68417.m03952 plastocyanin-like domain-containing
protein similar to PIR|JC7196 phytocyanin-related
protein Pn14 {Ipomoea nil}; contains Pfam profile
PF02298: Plastocyanin-like domain
Length = 349
Score = 29.1 bits (62), Expect = 1.6
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = -3
Query: 387 NGEPPHPQVGPHAPEMETEPTAQAGPANSTAPMTGTCPVTPVEPATGSS--PATATL 223
+G P P P AP T P + S+APMT P P+ P + S+ P++A +
Sbjct: 207 SGSPVSPTTSPPAPPKSTSPVSP-----SSAPMTS--PPAPMAPKSSSTIPPSSAPM 256
>At2g45470.1 68415.m05655 fasciclin-like arabinogalactan-protein
(FLA8)
Length = 420
Score = 28.7 bits (61), Expect = 2.1
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = -3
Query: 384 GEPPHPQVGPHAPEMETEPTAQAGPANSTAPMTGTCPVTPVEPATGSSPA 235
G+ P P APE T PT PA++ +P + P P + + S+P+
Sbjct: 333 GKSKSPSPAP-APEPVTAPTPS--PADAPSPTAASPPAPPTDESPESAPS 379
>At2g18100.1 68415.m02104 expressed protein
Length = 656
Score = 28.7 bits (61), Expect = 2.1
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = +2
Query: 281 VPVIGAVEFAGPACAVGSVSISGACGPTCGCGGS 382
VPVIGA FA A A G+V+ S A + G G+
Sbjct: 341 VPVIGASGFAAAAEAAGTVAGSVAVAASFGAAGA 374
>At1g20130.1 68414.m02518 family II extracellular lipase, putative
contains Pfam profile PF00657: GDSL-like
Lipase/Acylhydrolase; similar to EXL3 (PMID:11431566)
Length = 1006
Score = 28.7 bits (61), Expect = 2.1
Identities = 15/47 (31%), Positives = 18/47 (38%)
Frame = -3
Query: 378 PPHPQVGPHAPEMETEPTAQAGPANSTAPMTGTCPVTPVEPATGSSP 238
PP P P+ + P + PA AP CP P PA P
Sbjct: 65 PPACPPTPPKPQPKPAPPPEPKPAPPPAPKPVPCPSPPKPPAPTPKP 111
>At5g58470.2 68418.m07323 zinc finger (Ran-binding) family protein
weak similarity to SP|Q01844 RNA-binding protein EWS
(EWS oncogene) (Ewing sarcoma breakpoint region 1
protein) {Homo sapiens}; contains Pfam profiles PF00076:
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain),
PF00641: Zn-finger in Ran binding protein and others
Length = 422
Score = 28.3 bits (60), Expect = 2.8
Identities = 22/69 (31%), Positives = 28/69 (40%), Gaps = 4/69 (5%)
Frame = -2
Query: 376 AASAGGSACARDGDRTD-SAGRTRELDRADDGHLSRYTGGACHGEFASHGHVTDAGA--- 209
A GG +R G +D GR D SRY GG+ G G + G+
Sbjct: 121 ANDRGGGGYSRGGGDSDRGGGRGGRNDSGRSYESSRYDGGSRSGGSYGSGSQRENGSYGQ 180
Query: 208 AVPSTAAVP 182
A P AA+P
Sbjct: 181 APPPAAAIP 189
>At5g58470.1 68418.m07322 zinc finger (Ran-binding) family protein
weak similarity to SP|Q01844 RNA-binding protein EWS
(EWS oncogene) (Ewing sarcoma breakpoint region 1
protein) {Homo sapiens}; contains Pfam profiles PF00076:
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain),
PF00641: Zn-finger in Ran binding protein and others
Length = 422
Score = 28.3 bits (60), Expect = 2.8
Identities = 22/69 (31%), Positives = 28/69 (40%), Gaps = 4/69 (5%)
Frame = -2
Query: 376 AASAGGSACARDGDRTD-SAGRTRELDRADDGHLSRYTGGACHGEFASHGHVTDAGA--- 209
A GG +R G +D GR D SRY GG+ G G + G+
Sbjct: 121 ANDRGGGGYSRGGGDSDRGGGRGGRNDSGRSYESSRYDGGSRSGGSYGSGSQRENGSYGQ 180
Query: 208 AVPSTAAVP 182
A P AA+P
Sbjct: 181 APPPAAAIP 189
>At5g53870.1 68418.m06701 plastocyanin-like domain-containing
protein contains similarity to SP|Q02917 Early nodulin
55-2 precursor {Glycine max}; PF02298: Plastocyanin-like
domain
Length = 370
Score = 28.3 bits (60), Expect = 2.8
Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Frame = -3
Query: 378 PPH-PQVGP-HAPEMETEPTAQAGPANSTAPMTGTCPVTPVEPATGSSPA 235
P H P P H+P + P++S A P TP P+ SSPA
Sbjct: 237 PSHSPAHAPSHSPAHAPSHSPAHAPSHSPAHSPSHSPATPKSPSPSSSPA 286
>At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 334
Score = 28.3 bits (60), Expect = 2.8
Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 5/55 (9%)
Frame = -3
Query: 381 EPPHPQ--VGPHA---PEMETEPTAQAGPANSTAPMTGTCPVTPVEPATGSSPAT 232
+PPHP+ PH P + PT P ++ P T P TP P T P+T
Sbjct: 98 KPPHPKPPTKPHPHPKPPIVKPPTKP--PPSTPKPPTKPPPSTPKPPTTKPPPST 150
>At1g35230.1 68414.m04369 arabinogalactan-protein (AGP5) identical
to gi_3883128_gb_AAC77827
Length = 133
Score = 28.3 bits (60), Expect = 2.8
Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = -3
Query: 375 PHPQVGPHAPEMETEPTAQAGP-ANSTAPMTGTCPV-TPVEPATGSSPATA 229
P P P A P+A P A +TAP P +P P T +SP+ A
Sbjct: 37 PTPSQSPRATAPAPSPSANPPPSAPTTAPPVSQPPTESPPAPPTSTSPSGA 87
>At5g19900.1 68418.m02368 PRLI-interacting factor, putative strong
similarity to PRLI-interacting factor A [Arabidopsis
thaliana] GI:11139262
Length = 494
Score = 27.9 bits (59), Expect = 3.7
Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = -3
Query: 357 PHAPEMETEPTAQAGPANSTAPMTGTCPVTP-VEPATGSSPATATL 223
P+AP T +A + A + CPVTP V P SP+ L
Sbjct: 183 PYAPRNTTSFIIRAKKSGGIAELVSPCPVTPAVLPTPMFSPSREVL 228
>At1g33680.1 68414.m04166 KH domain-containing protein similar to
FUSE binding protein 2 GB:AAC50892 GI:1575607 from [Homo
sapiens]
Length = 759
Score = 27.9 bits (59), Expect = 3.7
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = -3
Query: 378 PPHPQVGPHAPEMETEPTAQAGPANSTAPMTGTCPVTPVEPATGSSPA 235
PP P P ++ + A P+ + P + TP P+ GS+PA
Sbjct: 561 PPRPAAPPG--DVPYQGPTPAAPSYGSTPAAASYGSTPAAPSYGSTPA 606
>At3g28780.1 68416.m03592 glycine-rich protein similar to H41 gene
for histone protein GB:X15142 GI:3204 [Physarum
polycephalum]
Length = 614
Score = 27.1 bits (57), Expect = 6.4
Identities = 20/52 (38%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Frame = -2
Query: 379 TAASAGGSACARDGDRTDSAGRTRELDRADD--GHLSRYTGGACHGEFASHG 230
+A +AG S A D D+AG D G S +GGA GE AS G
Sbjct: 213 SAGAAGESGSAATADSGDAAGADSGGAAGADSGGAASADSGGAAAGETASGG 264
>At3g19430.1 68416.m02464 late embryogenesis abundant
protein-related / LEA protein-related similar to late
embryogenesis abundant protein [Picea glauca] GI:1350543
Length = 559
Score = 27.1 bits (57), Expect = 6.4
Identities = 16/51 (31%), Positives = 21/51 (41%)
Frame = -3
Query: 375 PHPQVGPHAPEMETEPTAQAGPANSTAPMTGTCPVTPVEPATGSSPATATL 223
P P V P + T+P P S P T T P P P +P T ++
Sbjct: 158 PTPSVPSPTPPVPTDPMPSPPPPVSPPPPTPT-PSVPSPPDVTPTPPTPSV 207
>At2g04550.1 68415.m00463 dual specificity protein phosphatase
family protein contains Pfam profile: PF00782 dual
specificity phosphatase, catalytic domain
Length = 257
Score = 27.1 bits (57), Expect = 6.4
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Frame = -3
Query: 351 APEMETEPTAQ--AGPANSTAPMTGTCPVTPVEPATGSSPA 235
AP PT+ + PA+S P T TP +P TG A
Sbjct: 213 APVFNNAPTSSIFSSPASSIPPQEFTFGATPPKPTTGGDIA 253
>At1g50610.1 68414.m05685 leucine-rich repeat transmembrane protein
kinase, putative similar to receptor-like protein kinase
GB:AAC12254 GI:3015488 from [Lycopersicon esculentum]
Length = 686
Score = 27.1 bits (57), Expect = 6.4
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -3
Query: 324 AQAGPANSTAPMTGTCPVTPVEPATGSSP 238
A P +S++P PV+PV+P + S P
Sbjct: 244 APLSPCSSSSPGVPVVPVSPVDPKSTSPP 272
>At1g24267.1 68414.m03062 expressed protein
Length = 343
Score = 27.1 bits (57), Expect = 6.4
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -2
Query: 262 GACHGEFASHGHVTDAGAAVPSTAAVP 182
GA H + + + ++ A+PST+AVP
Sbjct: 220 GALHAQVRENKRIQESNKALPSTSAVP 246
>At4g16980.1 68417.m02560 arabinogalactan-protein family similar to
arabinogalactan protein [Arabidopsis thaliana]
gi|10880495|gb|AAG24277; contains proline-rich extensin
domains, INTERPRO:IPR002965
Length = 164
Score = 26.6 bits (56), Expect = 8.5
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = -3
Query: 378 PPHPQVGPHAPEMETEPTAQAGPANSTAPMT-GTCPVTPVEPATGSSPA 235
PP P P P M + P P+ S +P+T P P+ SSP+
Sbjct: 77 PPMPMAPPPMP-MASPPMMPMTPSTSPSPLTVPDMPSPPMPSGMESSPS 124
>At1g30020.1 68414.m03671 expressed protein contains Pfam profile
PF04398: Protein of unknown function, DUF538
Length = 157
Score = 26.6 bits (56), Expect = 8.5
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = -2
Query: 145 IWS*RRSTGTHTTQALTVHILYKTNLNAE*EDNKFRHI 32
+W RS HT + + +LY T + A ED + R +
Sbjct: 58 VWMRMRSKIEHTFREIGRRVLYDTEITAFVEDRRMRRL 95
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,281,417
Number of Sequences: 28952
Number of extensions: 168861
Number of successful extensions: 725
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 657
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 717
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 801831960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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