Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10a10
         (704 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI000051A8D7 Cluster: PREDICTED: similar to Rho GTPase...    74   3e-12
UniRef50_Q9VTU3 Cluster: CG6811-PA; n=2; Diptera|Rep: CG6811-PA ...    38   0.18 
UniRef50_Q5D8J0 Cluster: SJCHGC04791 protein; n=1; Schistosoma j...    36   0.73 
UniRef50_Q22961 Cluster: Putative uncharacterized protein F25B4....    33   6.8  
UniRef50_A7RZ35 Cluster: Predicted protein; n=1; Nematostella ve...    33   6.8  

>UniRef50_UPI000051A8D7 Cluster: PREDICTED: similar to Rho GTPase
           activating protein 1; n=3; Endopterygota|Rep: PREDICTED:
           similar to Rho GTPase activating protein 1 - Apis
           mellifera
          Length = 496

 Score = 74.1 bits (174), Expect = 3e-12
 Identities = 55/170 (32%), Positives = 75/170 (44%), Gaps = 19/170 (11%)
 Frame = +1

Query: 250 MDPEHQPKLNPVRAFQ--------VLHGCNGETEENYTSLSEYHDYEPSLEFDDSEL--- 396
           M+ ++QP LNP R            +     E E+ Y SLS+YHDYEP+LEFDD+EL   
Sbjct: 1   MEADYQPTLNPTRTLTDNNAHTSVCIIAIANEVEDPYPSLSDYHDYEPNLEFDDTELQTT 60

Query: 397 IHXXXXXXXXXXXXXXXXXXXDRTANDGTIEENFEEELARGP---EVYTEIAASG---LD 558
            +                   +   +DGTIEENFEE L   P    V  ++AA      D
Sbjct: 61  SNNALEEKDLINSAGTRLNYLESPVSDGTIEENFEEALVDAPVIKSVAEDLAALDGELAD 120

Query: 559 EEAFSDLNNXXXXXXXXXXXXXXXXXXXAACRLPP--SNELNPDQLLKYL 702
           EE + D++                    +AC+LPP      N  +LL+YL
Sbjct: 121 EEDYLDISRYGIVEVVGDDNAGRKVIVVSACKLPPVGKETFNYAKLLRYL 170


>UniRef50_Q9VTU3 Cluster: CG6811-PA; n=2; Diptera|Rep: CG6811-PA -
           Drosophila melanogaster (Fruit fly)
          Length = 476

 Score = 38.3 bits (85), Expect = 0.18
 Identities = 15/26 (57%), Positives = 21/26 (80%)
 Frame = +1

Query: 322 TEENYTSLSEYHDYEPSLEFDDSELI 399
           ++E   SLS+ HD+EP LEFDD+EL+
Sbjct: 23  SDEPQPSLSDLHDFEPKLEFDDTELL 48


>UniRef50_Q5D8J0 Cluster: SJCHGC04791 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC04791 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 228

 Score = 36.3 bits (80), Expect = 0.73
 Identities = 29/120 (24%), Positives = 48/120 (40%), Gaps = 1/120 (0%)
 Frame = +1

Query: 346 SEYHDYE-PSLEFDDSELIHXXXXXXXXXXXXXXXXXXXDRTANDGTIEENFEEELARGP 522
           S Y ++E P +EFD+ EL                      R   DG I+E+FE EL    
Sbjct: 80  SAYSEFEIPEMEFDEFEL----ELAAQKEFSSDEQLFESGRMTPDGLIDEDFERELGCAA 135

Query: 523 EVYTEIAASGLDEEAFSDLNNXXXXXXXXXXXXXXXXXXXAACRLPPSNELNPDQLLKYL 702
           +   E++   + +  + D++                    +ACRLP S+ ++   LL Y+
Sbjct: 136 K---ELSVQDVIDSDYPDISRLGVLQGAGDDKLGRKVIVFSACRLPASDLIDHQHLLTYI 192


>UniRef50_Q22961 Cluster: Putative uncharacterized protein F25B4.5;
           n=2; Caenorhabditis|Rep: Putative uncharacterized
           protein F25B4.5 - Caenorhabditis elegans
          Length = 710

 Score = 33.1 bits (72), Expect = 6.8
 Identities = 17/43 (39%), Positives = 24/43 (55%)
 Frame = -3

Query: 498 KILFDSAVVGCSI*KFFWNV*QLRWQWC*TRSMDQFRVIKFKA 370
           KILFD  ++ CS+ + FW +   RW W   +S  + R I  KA
Sbjct: 404 KILFDRCLIPCSLYEEFW-IKYARWTWKTYKSKTKSREIYMKA 445


>UniRef50_A7RZ35 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 662

 Score = 33.1 bits (72), Expect = 6.8
 Identities = 13/43 (30%), Positives = 24/43 (55%)
 Frame = -3

Query: 399 DQFRVIKFKAWFIVMVLRKTSVIFLCFPITTM*NLKGPDRIKF 271
           DQF ++    W + + L +T  +   +P+TT+ N +  DR +F
Sbjct: 153 DQFCLLHISRWGVTLALERTRAVLAQWPLTTIRNYESMDRGEF 195


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 638,107,531
Number of Sequences: 1657284
Number of extensions: 11781245
Number of successful extensions: 26882
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 25977
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26855
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 56198352344
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)