Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10a09
(799 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL021493-6|CAA16394.2| 781|Caenorhabditis elegans Hypothetical ... 31 1.3
AY314779-1|AAQ84886.1| 454|Caenorhabditis elegans secretin rece... 30 1.7
AL031620-2|CAA20927.2| 454|Caenorhabditis elegans Hypothetical ... 30 1.7
L16679-1|AAA28092.5| 2104|Caenorhabditis elegans Muscle position... 30 2.2
AF289202-1|AAK69172.1| 2104|Caenorhabditis elegans transmembrane... 30 2.2
Z47069-1|CAA87338.1| 964|Caenorhabditis elegans Hypothetical pr... 29 3.9
AF100307-11|AAC68929.1| 304|Caenorhabditis elegans Hypothetical... 29 5.1
Z74033-6|CAF31474.1| 321|Caenorhabditis elegans Hypothetical pr... 28 8.9
Z54342-17|CAA91155.2| 365|Caenorhabditis elegans Hypothetical p... 28 8.9
Z49913-8|CAA90148.2| 365|Caenorhabditis elegans Hypothetical pr... 28 8.9
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 28 8.9
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 28 8.9
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 28 8.9
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 28 8.9
U88308-19|AAB42328.1| 1927|Caenorhabditis elegans Hypothetical p... 28 8.9
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 28 8.9
AC006830-7|AAK68613.2| 479|Caenorhabditis elegans Hypothetical ... 28 8.9
>AL021493-6|CAA16394.2| 781|Caenorhabditis elegans Hypothetical
protein Y51A2B.6 protein.
Length = 781
Score = 30.7 bits (66), Expect = 1.3
Identities = 21/83 (25%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Frame = +1
Query: 58 NMNESVNIVAIVSKLLDSEKYKEAL--SIPYDEEHIENFKENCWEIVSVIIKKIDGDTLT 231
N N + +VA S++ D + AL SIP EH+ F +E S + +K + T
Sbjct: 386 NFNNELKVVAGSSQMYDGFEQLSALLLSIPDGIEHVTAFMNKIYECNSPVDEKFESQFKT 445
Query: 232 IKPSLYAACEQLLSIILERSTPE 300
+ ++ + L +++++ S+ E
Sbjct: 446 LMLNV-GKVQDLFNVLVDLSSIE 467
>AY314779-1|AAQ84886.1| 454|Caenorhabditis elegans secretin
receptor-like proteinSEB-3 protein.
Length = 454
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/29 (44%), Positives = 23/29 (79%)
Frame = +2
Query: 647 SAF*VNLLFILMLILIWVQKVKSGKIAKS 733
SA +NL+F+LM+++I VQK+++ A+S
Sbjct: 289 SALIMNLIFLLMIVVILVQKLRTENSAES 317
>AL031620-2|CAA20927.2| 454|Caenorhabditis elegans Hypothetical
protein C18B12.2 protein.
Length = 454
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/29 (44%), Positives = 23/29 (79%)
Frame = +2
Query: 647 SAF*VNLLFILMLILIWVQKVKSGKIAKS 733
SA +NL+F+LM+++I VQK+++ A+S
Sbjct: 289 SALIMNLIFLLMIVVILVQKLRTENSAES 317
>L16679-1|AAA28092.5| 2104|Caenorhabditis elegans Muscle positioning
protein 4 protein.
Length = 2104
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/58 (25%), Positives = 27/58 (46%)
Frame = -3
Query: 419 DLPRFPDSFLSTCCNGVRETENWASFFASSICSMNTKSASSGVDLSNMIDRSCSHAAY 246
D + PD + C G + + A+ +C+++T + DL +ID S S +Y
Sbjct: 394 DCVQLPDGYTCKCFAGYVDVSSNANLPPGRVCTLSTACPAQPTDLVFLIDGSGSIGSY 451
>AF289202-1|AAK69172.1| 2104|Caenorhabditis elegans transmembrane
matrix receptor MUP-4 protein.
Length = 2104
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/58 (25%), Positives = 27/58 (46%)
Frame = -3
Query: 419 DLPRFPDSFLSTCCNGVRETENWASFFASSICSMNTKSASSGVDLSNMIDRSCSHAAY 246
D + PD + C G + + A+ +C+++T + DL +ID S S +Y
Sbjct: 394 DCVQLPDGYTCKCFAGYVDVSSNANLPPGRVCTLSTACPAQPTDLVFLIDGSGSIGSY 451
>Z47069-1|CAA87338.1| 964|Caenorhabditis elegans Hypothetical
protein F36G3.1 protein.
Length = 964
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = -3
Query: 401 DSFLSTCCNGVRETENWASFFASSICSMNTKSASSGVDLSNMIDRS 264
D+ + CN V EN+ S +S T ASS D+SN+I+ S
Sbjct: 6 DTDTHSICNSVSSGENYKSPESSDCEGYATPLASSLTDISNVINHS 51
>AF100307-11|AAC68929.1| 304|Caenorhabditis elegans Hypothetical
protein T12B5.3 protein.
Length = 304
Score = 28.7 bits (61), Expect = 5.1
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +1
Query: 484 LEEKECLLLDSIPNFRRIT--KIYSMLPLFYDPFIDEIMKSSTDNTKAKE 627
L+ K+C+ + I +F R+ I S+LP F ++ I S TDN K E
Sbjct: 138 LKAKDCIHVKEI-HFNRLLFDDILSILPFFNAKVLENIKLSETDNLKKFE 186
>Z74033-6|CAF31474.1| 321|Caenorhabditis elegans Hypothetical
protein F38B7.8 protein.
Length = 321
Score = 27.9 bits (59), Expect = 8.9
Identities = 30/117 (25%), Positives = 54/117 (46%), Gaps = 6/117 (5%)
Frame = +1
Query: 124 EALSIPYDEEHIENFKENCWEIVSV---IIKKIDGDTLTIKPSLYAACEQLLSIILERST 294
E L+ YDE+H FK+N +V++ ++ I+G TL + Y + + + +S
Sbjct: 166 EMLAFKYDEKHKCQFKDNILTVVTITFLMMTIINGTTLIKIITFYRSNQS--ETLESKSR 223
Query: 295 PEEALLVFIE---QIELAKNDAQFSVSLTPLQQVLKKLSGKRGRSLEWCFNSIRTYI 456
+L+F++ Q L D F + L+ L + S G + C +SI +I
Sbjct: 224 IRRNVLLFLQTGLQDSLYLIDLLFMMKLSQLSDT-RVWSFISGTFVWQCLHSIDGFI 279
>Z54342-17|CAA91155.2| 365|Caenorhabditis elegans Hypothetical
protein C08H9.8 protein.
Length = 365
Score = 27.9 bits (59), Expect = 8.9
Identities = 15/58 (25%), Positives = 29/58 (50%)
Frame = +1
Query: 55 KNMNESVNIVAIVSKLLDSEKYKEALSIPYDEEHIENFKENCWEIVSVIIKKIDGDTL 228
KN S N +V+ +L+ + S+P D ++E+ NC+EI ++ + G +
Sbjct: 16 KNCRSSENRQVVVNPMLELQ------SVPIDLNYVEDLDTNCYEIKLENLEIVSGSLI 67
>Z49913-8|CAA90148.2| 365|Caenorhabditis elegans Hypothetical
protein C08H9.8 protein.
Length = 365
Score = 27.9 bits (59), Expect = 8.9
Identities = 15/58 (25%), Positives = 29/58 (50%)
Frame = +1
Query: 55 KNMNESVNIVAIVSKLLDSEKYKEALSIPYDEEHIENFKENCWEIVSVIIKKIDGDTL 228
KN S N +V+ +L+ + S+P D ++E+ NC+EI ++ + G +
Sbjct: 16 KNCRSSENRQVVVNPMLELQ------SVPIDLNYVEDLDTNCYEIKLENLEIVSGSLI 67
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/53 (26%), Positives = 23/53 (43%)
Frame = -3
Query: 404 PDSFLSTCCNGVRETENWASFFASSICSMNTKSASSGVDLSNMIDRSCSHAAY 246
PD + C G + + A+ +C++ T DL +ID S S +Y
Sbjct: 608 PDGYTCQCYGGFVDVSSNANLPPGRVCTVQTTCPKQKTDLVFLIDGSGSIGSY 660
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein
K08E5.3a protein.
Length = 3767
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/53 (26%), Positives = 23/53 (43%)
Frame = -3
Query: 404 PDSFLSTCCNGVRETENWASFFASSICSMNTKSASSGVDLSNMIDRSCSHAAY 246
PD + C G + + A+ +C++ T DL +ID S S +Y
Sbjct: 1192 PDGYTCQCYGGFVDVSSNANLPPGRVCTVQTTCPKQKTDLVFLIDGSGSIGSY 1244
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/53 (26%), Positives = 23/53 (43%)
Frame = -3
Query: 404 PDSFLSTCCNGVRETENWASFFASSICSMNTKSASSGVDLSNMIDRSCSHAAY 246
PD + C G + + A+ +C++ T DL +ID S S +Y
Sbjct: 608 PDGYTCQCYGGFVDVSSNANLPPGRVCTVQTTCPKQKTDLVFLIDGSGSIGSY 660
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/53 (26%), Positives = 23/53 (43%)
Frame = -3
Query: 404 PDSFLSTCCNGVRETENWASFFASSICSMNTKSASSGVDLSNMIDRSCSHAAY 246
PD + C G + + A+ +C++ T DL +ID S S +Y
Sbjct: 1192 PDGYTCQCYGGFVDVSSNANLPPGRVCTVQTTCPKQKTDLVFLIDGSGSIGSY 1244
>U88308-19|AAB42328.1| 1927|Caenorhabditis elegans Hypothetical
protein C32E8.11 protein.
Length = 1927
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 205 KKIDGDTLTIKPSLYAACEQLLSIILERS 291
KK D + + P L CEQL+ IIL+ S
Sbjct: 85 KKDDEEAAVLAPELKKRCEQLVEIILQFS 113
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell
adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/53 (26%), Positives = 23/53 (43%)
Frame = -3
Query: 404 PDSFLSTCCNGVRETENWASFFASSICSMNTKSASSGVDLSNMIDRSCSHAAY 246
PD + C G + + A+ +C++ T DL +ID S S +Y
Sbjct: 1192 PDGYTCQCYGGFVDVSSNANLPPGRVCTVQTTCPKQKTDLVFLIDGSGSIGSY 1244
>AC006830-7|AAK68613.2| 479|Caenorhabditis elegans Hypothetical
protein ZK105.6 protein.
Length = 479
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/53 (26%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +1
Query: 55 KNMNESVNIVAIVSKLLDSEK-YKEALSIPYDEEHIENFKENCWEIVSVIIKK 210
KN+N+ N+ A ++ + + Y +EHI+ K+N ++V +I K
Sbjct: 259 KNLNKMNNLAAQKKSFINGKACFFNIAEYNYSDEHIKYLKKNYDKVVKIITTK 311
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,953,984
Number of Sequences: 27780
Number of extensions: 345919
Number of successful extensions: 942
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 911
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 942
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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