Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10a04
         (593 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    25   1.8  
AY095933-1|AAM34435.1|  505|Anopheles gambiae cytochrome P450 pr...    24   3.2  
AY752897-1|AAV30071.1|  107|Anopheles gambiae peroxidase 4B prot...    23   9.8  
AJ973474-1|CAJ01521.1|  191|Anopheles gambiae hypothetical prote...    23   9.8  
AJ697734-1|CAG26927.1|  191|Anopheles gambiae putative chemosens...    23   9.8  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            23   9.8  

>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 25.0 bits (52), Expect = 1.8
 Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
 Frame = -2

Query: 481 TSAGTPDSLLSNGRN----LFINTTPSNNLS*LGASKISVVANCRNSTLCSRHLSASLEN 314
           ++A   +S + NG N        TTP+N  +  G S  +   N  +S+ C+ H+S++  N
Sbjct: 120 SNAALSNSSVLNGSNSGSATTTTTTPTNPGNGNGGSNNN--NNSNSSSSCNNHVSSNTNN 177

Query: 313 N 311
           N
Sbjct: 178 N 178


>AY095933-1|AAM34435.1|  505|Anopheles gambiae cytochrome P450
           protein.
          Length = 505

 Score = 24.2 bits (50), Expect = 3.2
 Identities = 16/43 (37%), Positives = 24/43 (55%)
 Frame = +3

Query: 444 PLDNKLSGVPADVGQINTGTVYVHCKAGRTRSATLVGCYLMMK 572
           PL N + GV +++   N      + K G+ +SA LVG Y M+K
Sbjct: 42  PLGN-MKGVGSEI-HFNDVLNEAYAK-GKAQSAPLVGLYFMLK 81


>AY752897-1|AAV30071.1|  107|Anopheles gambiae peroxidase 4B
           protein.
          Length = 107

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 9/17 (52%), Positives = 11/17 (64%), Gaps = 2/17 (11%)
 Frame = +3

Query: 183 RWYDRIDDT--VILGAL 227
           RWYD +DD    + GAL
Sbjct: 53  RWYDTVDDVELAVAGAL 69


>AJ973474-1|CAJ01521.1|  191|Anopheles gambiae hypothetical protein
           protein.
          Length = 191

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = -2

Query: 526 PALQ*TYTVPVLICPTSAGTPDSLLSN 446
           PA Q +    ++I PT AG P   LSN
Sbjct: 164 PATQSSNVQAIVIDPTLAGQPIGNLSN 190


>AJ697734-1|CAG26927.1|  191|Anopheles gambiae putative chemosensory
           protein CSP5 protein.
          Length = 191

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = -2

Query: 526 PALQ*TYTVPVLICPTSAGTPDSLLSN 446
           PA Q +    ++I PT AG P   LSN
Sbjct: 164 PATQSSNVQAIVIDPTLAGQPIGNLSN 190


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 9/27 (33%), Positives = 18/27 (66%)
 Frame = +3

Query: 402 DKLFEGVVFINRFLPLDNKLSGVPADV 482
           D+ FEG+V ++R     N+L+ +P ++
Sbjct: 251 DRAFEGLVSLSRLELSLNRLTNLPPEL 277


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 663,788
Number of Sequences: 2352
Number of extensions: 13465
Number of successful extensions: 19
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57188952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)