BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bmov10a03 (390 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U58682-1|AAB07066.1| 69|Homo sapiens ribosomal protein S28 pro... 87 1e-17 L05091-1|AAC15855.1| 69|Homo sapiens ribosomal protein S28 pro... 87 1e-17 CR457055-1|CAG33336.1| 69|Homo sapiens RPS28 protein. 87 1e-17 BC070218-1|AAH70218.1| 69|Homo sapiens ribosomal protein S28 p... 87 1e-17 BC070217-1|AAH70217.1| 69|Homo sapiens ribosomal protein S28 p... 87 1e-17 BC021239-1|AAH21239.1| 69|Homo sapiens ribosomal protein S28 p... 87 1e-17 BC000354-1|AAH00354.1| 69|Homo sapiens ribosomal protein S28 p... 87 1e-17 AB061846-1|BAB79484.1| 69|Homo sapiens ribosomal protein S28 p... 87 1e-17 AL023513-1|CAI19979.1| 57|Homo sapiens protein ( Human DNA seq... 43 4e-04 U14680-1|AAA73985.1| 1863|Homo sapiens breast and ovarian cancer... 29 7.1 L78833-1|AAC37594.1| 1863|Homo sapiens BRCA1 protein. 29 7.1 DQ478408-3|ABF14462.1| 1822|Homo sapiens early onset breast canc... 29 7.1 DQ190457-3|ABA29229.1| 1822|Homo sapiens breast cancer 1 early o... 29 7.1 DQ190456-3|ABA29226.1| 1863|Homo sapiens breast cancer 1 early o... 29 7.1 DQ190455-3|ABA29223.1| 1863|Homo sapiens breast cancer 1 early o... 29 7.1 DQ190454-3|ABA29220.1| 1863|Homo sapiens breast cancer 1 early o... 29 7.1 DQ190453-3|ABA29217.1| 1863|Homo sapiens breast cancer 1 early o... 29 7.1 DQ190452-3|ABA29214.1| 1863|Homo sapiens breast cancer 1 early o... 29 7.1 DQ190451-3|ABA29211.1| 1863|Homo sapiens breast cancer 1 early o... 29 7.1 DQ190450-3|ABA29208.1| 1863|Homo sapiens breast cancer 1 early o... 29 7.1 BC115037-1|AAI15038.1| 1354|Homo sapiens BRCA1 protein protein. 29 7.1 BC062429-1|AAH62429.1| 440|Homo sapiens BRCA1 protein protein. 29 7.1 BC030969-1|AAH30969.1| 657|Homo sapiens BRCA1 protein protein. 29 7.1 AY751490-1|AAU93634.1| 1841|Homo sapiens breast and ovarian canc... 29 7.1 AY354539-1|AAQ92977.1| 1399|Homo sapiens IRIS protein. 29 7.1 AY304547-1|AAP70031.1| 1141|Homo sapiens breast and ovarian canc... 29 7.1 AY273801-1|AAP12647.1| 1863|Homo sapiens breast cancer 1, early ... 29 7.1 AF005068-1|AAB61673.1| 1792|Homo sapiens breast and ovarian canc... 29 7.1 BX641077-1|CAE46038.1| 615|Homo sapiens hypothetical protein pr... 28 9.3 BC032456-1|AAH32456.1| 412|Homo sapiens ZCCHC6 protein protein. 28 9.3 AL353678-6|CAH71518.1| 1495|Homo sapiens zinc finger, CCHC domai... 28 9.3 AL353678-5|CAH71519.1| 1259|Homo sapiens zinc finger, CCHC domai... 28 9.3 AL137849-4|CAI14920.1| 1495|Homo sapiens zinc finger, CCHC domai... 28 9.3 AL137849-3|CAI14921.1| 1259|Homo sapiens zinc finger, CCHC domai... 28 9.3 AK055546-1|BAB70951.1| 750|Homo sapiens protein ( Homo sapiens ... 28 9.3 >U58682-1|AAB07066.1| 69|Homo sapiens ribosomal protein S28 protein. Length = 69 Score = 87.4 bits (207), Expect = 1e-17 Identities = 40/51 (78%), Positives = 46/51 (90%) Frame = +2 Query: 59 KPNVLARVVKVLGRTGSQGQCTQVKVEFIGETSRQIIRNVKGPVRDGDILT 211 +P LARV KVLGRTGSQGQCTQV+VEF+ +TSR IIRNVKGPVR+GD+LT Sbjct: 7 QPIKLARVTKVLGRTGSQGQCTQVRVEFMDDTSRSIIRNVKGPVREGDVLT 57 >L05091-1|AAC15855.1| 69|Homo sapiens ribosomal protein S28 protein. Length = 69 Score = 87.4 bits (207), Expect = 1e-17 Identities = 40/51 (78%), Positives = 46/51 (90%) Frame = +2 Query: 59 KPNVLARVVKVLGRTGSQGQCTQVKVEFIGETSRQIIRNVKGPVRDGDILT 211 +P LARV KVLGRTGSQGQCTQV+VEF+ +TSR IIRNVKGPVR+GD+LT Sbjct: 7 QPIKLARVTKVLGRTGSQGQCTQVRVEFMDDTSRSIIRNVKGPVREGDVLT 57 >CR457055-1|CAG33336.1| 69|Homo sapiens RPS28 protein. Length = 69 Score = 87.4 bits (207), Expect = 1e-17 Identities = 40/51 (78%), Positives = 46/51 (90%) Frame = +2 Query: 59 KPNVLARVVKVLGRTGSQGQCTQVKVEFIGETSRQIIRNVKGPVRDGDILT 211 +P LARV KVLGRTGSQGQCTQV+VEF+ +TSR IIRNVKGPVR+GD+LT Sbjct: 7 QPIKLARVTKVLGRTGSQGQCTQVRVEFMDDTSRSIIRNVKGPVREGDVLT 57 >BC070218-1|AAH70218.1| 69|Homo sapiens ribosomal protein S28 protein. Length = 69 Score = 87.4 bits (207), Expect = 1e-17 Identities = 40/51 (78%), Positives = 46/51 (90%) Frame = +2 Query: 59 KPNVLARVVKVLGRTGSQGQCTQVKVEFIGETSRQIIRNVKGPVRDGDILT 211 +P LARV KVLGRTGSQGQCTQV+VEF+ +TSR IIRNVKGPVR+GD+LT Sbjct: 7 QPIKLARVTKVLGRTGSQGQCTQVRVEFMDDTSRSIIRNVKGPVREGDVLT 57 >BC070217-1|AAH70217.1| 69|Homo sapiens ribosomal protein S28 protein. Length = 69 Score = 87.4 bits (207), Expect = 1e-17 Identities = 40/51 (78%), Positives = 46/51 (90%) Frame = +2 Query: 59 KPNVLARVVKVLGRTGSQGQCTQVKVEFIGETSRQIIRNVKGPVRDGDILT 211 +P LARV KVLGRTGSQGQCTQV+VEF+ +TSR IIRNVKGPVR+GD+LT Sbjct: 7 QPIKLARVTKVLGRTGSQGQCTQVRVEFMDDTSRSIIRNVKGPVREGDVLT 57 >BC021239-1|AAH21239.1| 69|Homo sapiens ribosomal protein S28 protein. Length = 69 Score = 87.4 bits (207), Expect = 1e-17 Identities = 40/51 (78%), Positives = 46/51 (90%) Frame = +2 Query: 59 KPNVLARVVKVLGRTGSQGQCTQVKVEFIGETSRQIIRNVKGPVRDGDILT 211 +P LARV KVLGRTGSQGQCTQV+VEF+ +TSR IIRNVKGPVR+GD+LT Sbjct: 7 QPIKLARVTKVLGRTGSQGQCTQVRVEFMDDTSRSIIRNVKGPVREGDVLT 57 >BC000354-1|AAH00354.1| 69|Homo sapiens ribosomal protein S28 protein. Length = 69 Score = 87.4 bits (207), Expect = 1e-17 Identities = 40/51 (78%), Positives = 46/51 (90%) Frame = +2 Query: 59 KPNVLARVVKVLGRTGSQGQCTQVKVEFIGETSRQIIRNVKGPVRDGDILT 211 +P LARV KVLGRTGSQGQCTQV+VEF+ +TSR IIRNVKGPVR+GD+LT Sbjct: 7 QPIKLARVTKVLGRTGSQGQCTQVRVEFMDDTSRSIIRNVKGPVREGDVLT 57 >AB061846-1|BAB79484.1| 69|Homo sapiens ribosomal protein S28 protein. Length = 69 Score = 87.4 bits (207), Expect = 1e-17 Identities = 40/51 (78%), Positives = 46/51 (90%) Frame = +2 Query: 59 KPNVLARVVKVLGRTGSQGQCTQVKVEFIGETSRQIIRNVKGPVRDGDILT 211 +P LARV KVLGRTGSQGQCTQV+VEF+ +TSR IIRNVKGPVR+GD+LT Sbjct: 7 QPIKLARVTKVLGRTGSQGQCTQVRVEFMDDTSRSIIRNVKGPVREGDVLT 57 >AL023513-1|CAI19979.1| 57|Homo sapiens protein ( Human DNA sequence from clone RP1-268D13 on chromosome 22q11.21-12.2. ). Length = 57 Score = 42.7 bits (96), Expect = 4e-04 Identities = 20/37 (54%), Positives = 26/37 (70%) Frame = +2 Query: 62 PNVLARVVKVLGRTGSQGQCTQVKVEFIGETSRQIIR 172 P L + KVLGRT SQGQCT+V VEF+ S+++ R Sbjct: 8 PVKLVKATKVLGRTSSQGQCTRVCVEFMVSQSKRLRR 44 >U14680-1|AAA73985.1| 1863|Homo sapiens breast and ovarian cancer susceptibility protein. Length = 1863 Score = 28.7 bits (61), Expect = 7.1 Identities = 13/32 (40%), Positives = 19/32 (59%) Frame = -1 Query: 99 RPSTFTTRARTLGLSILACNIELNTINTRAPK 4 + S F T+A + SI +ELN N++APK Sbjct: 576 KESAFKTKAEPISSSISNMELELNIHNSKAPK 607 >L78833-1|AAC37594.1| 1863|Homo sapiens BRCA1 protein. Length = 1863 Score = 28.7 bits (61), Expect = 7.1 Identities = 13/32 (40%), Positives = 19/32 (59%) Frame = -1 Query: 99 RPSTFTTRARTLGLSILACNIELNTINTRAPK 4 + S F T+A + SI +ELN N++APK Sbjct: 576 KESAFKTKAEPISSSISNMELELNIHNSKAPK 607 >DQ478408-3|ABF14462.1| 1822|Homo sapiens early onset breast cancer 1 protein. Length = 1822 Score = 28.7 bits (61), Expect = 7.1 Identities = 13/32 (40%), Positives = 19/32 (59%) Frame = -1 Query: 99 RPSTFTTRARTLGLSILACNIELNTINTRAPK 4 + S F T+A + SI +ELN N++APK Sbjct: 576 KESAFKTKAEPISSSISNMELELNIHNSKAPK 607 >DQ190457-3|ABA29229.1| 1822|Homo sapiens breast cancer 1 early onset protein. Length = 1822 Score = 28.7 bits (61), Expect = 7.1 Identities = 13/32 (40%), Positives = 19/32 (59%) Frame = -1 Query: 99 RPSTFTTRARTLGLSILACNIELNTINTRAPK 4 + S F T+A + SI +ELN N++APK Sbjct: 576 KESAFKTKAEPISSSISNMELELNIHNSKAPK 607 >DQ190456-3|ABA29226.1| 1863|Homo sapiens breast cancer 1 early onset protein. Length = 1863 Score = 28.7 bits (61), Expect = 7.1 Identities = 13/32 (40%), Positives = 19/32 (59%) Frame = -1 Query: 99 RPSTFTTRARTLGLSILACNIELNTINTRAPK 4 + S F T+A + SI +ELN N++APK Sbjct: 576 KESAFKTKAEPISSSISNMELELNIHNSKAPK 607 >DQ190455-3|ABA29223.1| 1863|Homo sapiens breast cancer 1 early onset protein. Length = 1863 Score = 28.7 bits (61), Expect = 7.1 Identities = 13/32 (40%), Positives = 19/32 (59%) Frame = -1 Query: 99 RPSTFTTRARTLGLSILACNIELNTINTRAPK 4 + S F T+A + SI +ELN N++APK Sbjct: 576 KESAFKTKAEPISSSISNMELELNIHNSKAPK 607 >DQ190454-3|ABA29220.1| 1863|Homo sapiens breast cancer 1 early onset protein. Length = 1863 Score = 28.7 bits (61), Expect = 7.1 Identities = 13/32 (40%), Positives = 19/32 (59%) Frame = -1 Query: 99 RPSTFTTRARTLGLSILACNIELNTINTRAPK 4 + S F T+A + SI +ELN N++APK Sbjct: 576 KESAFKTKAEPISSSISNMELELNIHNSKAPK 607 >DQ190453-3|ABA29217.1| 1863|Homo sapiens breast cancer 1 early onset protein. Length = 1863 Score = 28.7 bits (61), Expect = 7.1 Identities = 13/32 (40%), Positives = 19/32 (59%) Frame = -1 Query: 99 RPSTFTTRARTLGLSILACNIELNTINTRAPK 4 + S F T+A + SI +ELN N++APK Sbjct: 576 KESAFKTKAEPISSSISNMELELNIHNSKAPK 607 >DQ190452-3|ABA29214.1| 1863|Homo sapiens breast cancer 1 early onset protein. Length = 1863 Score = 28.7 bits (61), Expect = 7.1 Identities = 13/32 (40%), Positives = 19/32 (59%) Frame = -1 Query: 99 RPSTFTTRARTLGLSILACNIELNTINTRAPK 4 + S F T+A + SI +ELN N++APK Sbjct: 576 KESAFKTKAEPISSSISNMELELNIHNSKAPK 607 >DQ190451-3|ABA29211.1| 1863|Homo sapiens breast cancer 1 early onset protein. Length = 1863 Score = 28.7 bits (61), Expect = 7.1 Identities = 13/32 (40%), Positives = 19/32 (59%) Frame = -1 Query: 99 RPSTFTTRARTLGLSILACNIELNTINTRAPK 4 + S F T+A + SI +ELN N++APK Sbjct: 576 KESAFKTKAEPISSSISNMELELNIHNSKAPK 607 >DQ190450-3|ABA29208.1| 1863|Homo sapiens breast cancer 1 early onset protein. Length = 1863 Score = 28.7 bits (61), Expect = 7.1 Identities = 13/32 (40%), Positives = 19/32 (59%) Frame = -1 Query: 99 RPSTFTTRARTLGLSILACNIELNTINTRAPK 4 + S F T+A + SI +ELN N++APK Sbjct: 576 KESAFKTKAEPISSSISNMELELNIHNSKAPK 607 >BC115037-1|AAI15038.1| 1354|Homo sapiens BRCA1 protein protein. Length = 1354 Score = 28.7 bits (61), Expect = 7.1 Identities = 13/32 (40%), Positives = 19/32 (59%) Frame = -1 Query: 99 RPSTFTTRARTLGLSILACNIELNTINTRAPK 4 + S F T+A + SI +ELN N++APK Sbjct: 46 KESAFKTKAEPISSSISNMELELNIHNSKAPK 77 >BC062429-1|AAH62429.1| 440|Homo sapiens BRCA1 protein protein. Length = 440 Score = 28.7 bits (61), Expect = 7.1 Identities = 13/32 (40%), Positives = 19/32 (59%) Frame = -1 Query: 99 RPSTFTTRARTLGLSILACNIELNTINTRAPK 4 + S F T+A + SI +ELN N++APK Sbjct: 360 KESAFKTKAEPISSSISNMELELNIHNSKAPK 391 >BC030969-1|AAH30969.1| 657|Homo sapiens BRCA1 protein protein. Length = 657 Score = 28.7 bits (61), Expect = 7.1 Identities = 13/32 (40%), Positives = 19/32 (59%) Frame = -1 Query: 99 RPSTFTTRARTLGLSILACNIELNTINTRAPK 4 + S F T+A + SI +ELN N++APK Sbjct: 576 KESAFKTKAEPISSSISNMELELNIHNSKAPK 607 >AY751490-1|AAU93634.1| 1841|Homo sapiens breast and ovarian cancer susceptibility protein protein. Length = 1841 Score = 28.7 bits (61), Expect = 7.1 Identities = 13/32 (40%), Positives = 19/32 (59%) Frame = -1 Query: 99 RPSTFTTRARTLGLSILACNIELNTINTRAPK 4 + S F T+A + SI +ELN N++APK Sbjct: 576 KESAFKTKAEPISSSISNMELELNIHNSKAPK 607 >AY354539-1|AAQ92977.1| 1399|Homo sapiens IRIS protein. Length = 1399 Score = 28.7 bits (61), Expect = 7.1 Identities = 13/32 (40%), Positives = 19/32 (59%) Frame = -1 Query: 99 RPSTFTTRARTLGLSILACNIELNTINTRAPK 4 + S F T+A + SI +ELN N++APK Sbjct: 576 KESAFKTKAEPISSSISNMELELNIHNSKAPK 607 >AY304547-1|AAP70031.1| 1141|Homo sapiens breast and ovarian cancer susceptibility protein protein. Length = 1141 Score = 28.7 bits (61), Expect = 7.1 Identities = 13/32 (40%), Positives = 19/32 (59%) Frame = -1 Query: 99 RPSTFTTRARTLGLSILACNIELNTINTRAPK 4 + S F T+A + SI +ELN N++APK Sbjct: 352 KESAFKTKAEPISSSISNMELELNIHNSKAPK 383 >AY273801-1|AAP12647.1| 1863|Homo sapiens breast cancer 1, early onset protein. Length = 1863 Score = 28.7 bits (61), Expect = 7.1 Identities = 13/32 (40%), Positives = 19/32 (59%) Frame = -1 Query: 99 RPSTFTTRARTLGLSILACNIELNTINTRAPK 4 + S F T+A + SI +ELN N++APK Sbjct: 576 KESAFKTKAEPISSSISNMELELNIHNSKAPK 607 >AF005068-1|AAB61673.1| 1792|Homo sapiens breast and ovarian cancer susceptibility protein splice variant protein. Length = 1792 Score = 28.7 bits (61), Expect = 7.1 Identities = 13/32 (40%), Positives = 19/32 (59%) Frame = -1 Query: 99 RPSTFTTRARTLGLSILACNIELNTINTRAPK 4 + S F T+A + SI +ELN N++APK Sbjct: 505 KESAFKTKAEPISSSISNMELELNIHNSKAPK 536 >BX641077-1|CAE46038.1| 615|Homo sapiens hypothetical protein protein. Length = 615 Score = 28.3 bits (60), Expect = 9.3 Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 1/50 (2%) Frame = +1 Query: 31 KLDITSQN-G*TQRSCSCRESTRPYWFSGPVYSSEGRVHWGDQPSDHQER 177 K IT N G T R C S+ PY F P+YS ++ D D +R Sbjct: 53 KKKITPGNYGNTPRKGPCAVSSNPYAFKNPIYSQPAWMN--DSHKDQSKR 100 >BC032456-1|AAH32456.1| 412|Homo sapiens ZCCHC6 protein protein. Length = 412 Score = 28.3 bits (60), Expect = 9.3 Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 1/50 (2%) Frame = +1 Query: 31 KLDITSQN-G*TQRSCSCRESTRPYWFSGPVYSSEGRVHWGDQPSDHQER 177 K IT N G T R C S+ PY F P+YS ++ D D +R Sbjct: 53 KKKITPGNYGNTPRKGPCAVSSNPYAFKNPIYSQPAWMN--DSHKDQSKR 100 >AL353678-6|CAH71518.1| 1495|Homo sapiens zinc finger, CCHC domain containing 6 protein. Length = 1495 Score = 28.3 bits (60), Expect = 9.3 Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 1/50 (2%) Frame = +1 Query: 31 KLDITSQN-G*TQRSCSCRESTRPYWFSGPVYSSEGRVHWGDQPSDHQER 177 K IT N G T R C S+ PY F P+YS ++ D D +R Sbjct: 53 KKKITPGNYGNTPRKGPCAVSSNPYAFKNPIYSQPAWMN--DSHKDQSKR 100 >AL353678-5|CAH71519.1| 1259|Homo sapiens zinc finger, CCHC domain containing 6 protein. Length = 1259 Score = 28.3 bits (60), Expect = 9.3 Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 1/50 (2%) Frame = +1 Query: 31 KLDITSQN-G*TQRSCSCRESTRPYWFSGPVYSSEGRVHWGDQPSDHQER 177 K IT N G T R C S+ PY F P+YS ++ D D +R Sbjct: 53 KKKITPGNYGNTPRKGPCAVSSNPYAFKNPIYSQPAWMN--DSHKDQSKR 100 >AL137849-4|CAI14920.1| 1495|Homo sapiens zinc finger, CCHC domain containing 6 protein. Length = 1495 Score = 28.3 bits (60), Expect = 9.3 Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 1/50 (2%) Frame = +1 Query: 31 KLDITSQN-G*TQRSCSCRESTRPYWFSGPVYSSEGRVHWGDQPSDHQER 177 K IT N G T R C S+ PY F P+YS ++ D D +R Sbjct: 53 KKKITPGNYGNTPRKGPCAVSSNPYAFKNPIYSQPAWMN--DSHKDQSKR 100 >AL137849-3|CAI14921.1| 1259|Homo sapiens zinc finger, CCHC domain containing 6 protein. Length = 1259 Score = 28.3 bits (60), Expect = 9.3 Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 1/50 (2%) Frame = +1 Query: 31 KLDITSQN-G*TQRSCSCRESTRPYWFSGPVYSSEGRVHWGDQPSDHQER 177 K IT N G T R C S+ PY F P+YS ++ D D +R Sbjct: 53 KKKITPGNYGNTPRKGPCAVSSNPYAFKNPIYSQPAWMN--DSHKDQSKR 100 >AK055546-1|BAB70951.1| 750|Homo sapiens protein ( Homo sapiens cDNA FLJ30984 fis, clone HHDPC2000456. ). Length = 750 Score = 28.3 bits (60), Expect = 9.3 Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 1/50 (2%) Frame = +1 Query: 31 KLDITSQN-G*TQRSCSCRESTRPYWFSGPVYSSEGRVHWGDQPSDHQER 177 K IT N G T R C S+ PY F P+YS ++ D D +R Sbjct: 53 KKKITPGNYGNTPRKGPCAVSSNPYAFKNPIYSQPAWMN--DSHKDQSKR 100 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 54,918,998 Number of Sequences: 237096 Number of extensions: 982734 Number of successful extensions: 1969 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 1943 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1969 length of database: 76,859,062 effective HSP length: 82 effective length of database: 57,417,190 effective search space used: 2698607930 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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