Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc9p19
         (690 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    29   0.10 
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            29   0.18 
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    27   0.42 
AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    23   6.9  
DQ974163-1|ABJ52803.1|  595|Anopheles gambiae serpin 4B protein.       23   9.1  
DQ004401-1|AAY21240.1|  153|Anopheles gambiae lysozyme c-7 protein.    23   9.1  

>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 29.5 bits (63), Expect = 0.10
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = +1

Query: 382  NENEDDMRRLSMETDTDEAVQRSDPD 459
            N+NED+++ + +E + DE V   DP+
Sbjct: 1351 NQNEDEVQPMEVEEERDEGVAADDPE 1376


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 28.7 bits (61), Expect = 0.18
 Identities = 30/126 (23%), Positives = 57/126 (45%), Gaps = 6/126 (4%)
 Frame = +1

Query: 124 ISCNNIMTSQA-LASLTATYTDSEGEEDMEDQTPEKEEPKEAHSVPTSPRKVEESNKPAS 300
           ++ NN++ S + + + TA   + +GEE+ ED   E+E P       + P ++  S    +
Sbjct: 23  LAANNVLPSTSNITNTTAPLDEVDGEEE-ED---EEEGPGVRQKQSSPPARLSSSASSTA 78

Query: 301 APVSPKKSLVSYVDDT---IVSDEEPTS--PVNENEDDMRRLSMETDTDEAVQRSDPDDS 465
           A +   KS  S +  +   +  DE  TS      +E  ++R +  +        S PD +
Sbjct: 79  AALLKTKSKQSALIGSGHYLARDEPSTSLAVAGGSERRVQRDATSSGGRPGQSGSPPDPT 138

Query: 466 EDGITI 483
            +GI +
Sbjct: 139 RNGIVL 144


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/proton
            exchanger 3 protein.
          Length = 1221

 Score = 27.5 bits (58), Expect = 0.42
 Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
 Frame = +1

Query: 250  SVPTSPRKVEESNKPASAPVSPKKS--LVSYVDDTIVSDEEPTSPVNENEDDM-RRLSME 420
            S   +P+     +     PV+P+ +  L +   D+   DEE  S      DD  RRL+  
Sbjct: 1134 SSTNTPKSAGRRSGGGGGPVNPQTTALLSASSTDSDEDDEEEGSGDRHRADDATRRLNGA 1193

Query: 421  TDTDEAVQRSDPDDSED 471
             + D+  +  D DD ++
Sbjct: 1194 GNNDDEDEDDDEDDDDE 1210


>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +1

Query: 184 DSEGEEDMEDQTPEKE 231
           D EGEED ED+  E E
Sbjct: 477 DYEGEEDEEDEEDEYE 492


>DQ974163-1|ABJ52803.1|  595|Anopheles gambiae serpin 4B protein.
          Length = 595

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +3

Query: 471 RHHNPT*TIRKVSQRTTRIYSKILQPHVNRRT 566
           R H PT   +KVS   T + +KI     N+++
Sbjct: 16  RLHAPTANTKKVSDSVTNLAAKIANALSNQKS 47


>DQ004401-1|AAY21240.1|  153|Anopheles gambiae lysozyme c-7 protein.
          Length = 153

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +1

Query: 82  KESCHILLKQPLCNISCNNIMT 147
           KE C +  K   CN+ C +++T
Sbjct: 88  KEWCRVGYKGGKCNMKCEDLVT 109


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 666,006
Number of Sequences: 2352
Number of extensions: 13622
Number of successful extensions: 40
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69831885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)