Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc9o24
         (145 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    23   0.21 
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    20   2.0  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    19   6.0  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    18   8.0  

>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 23.4 bits (48), Expect = 0.21
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +3

Query: 9   FVIVFIVILFLYCMV 53
           F+I  I++L LYC++
Sbjct: 246 FIIPLIILLILYCII 260


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 20.2 bits (40), Expect = 2.0
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +2

Query: 23  YCNFIFVLY 49
           YCNFI + Y
Sbjct: 321 YCNFIILFY 329


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 18.6 bits (36), Expect = 6.0
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +3

Query: 9   FVIVFIVILFLYCMVRNRNSRQY 77
           +V V   +LF Y + RN+  + Y
Sbjct: 140 YVFVTSYLLFDYFVQRNQEYKYY 162


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 18.2 bits (35), Expect = 8.0
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +3

Query: 9   FVIVFIVILFLYCM 50
           F+I  + +LFL C+
Sbjct: 120 FIIFTVHLLFLLCI 133



 Score = 18.2 bits (35), Expect = 8.0
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +3

Query: 9   FVIVFIVILFLYCM 50
           F+I  + +LFL C+
Sbjct: 153 FIIFTVHLLFLLCI 166


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,835
Number of Sequences: 336
Number of extensions: 181
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 28
effective length of database: 113,177
effective search space used:  2150363
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)