Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc9o21
(703 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 33 0.003
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 27 0.17
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 26 0.40
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 24 1.6
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 24 1.6
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 24 1.6
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 24 1.6
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 24 1.6
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 24 1.6
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 24 1.6
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 24 1.6
AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cycl... 24 1.6
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 23 3.7
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 23 3.7
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 23 3.7
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 22 4.9
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 22 4.9
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 22 4.9
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 22 4.9
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 22 4.9
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 22 4.9
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 22 4.9
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 22 4.9
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 22 6.5
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 21 8.6
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 32.7 bits (71), Expect = 0.003
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +2
Query: 98 EQGKAGIDGLPGWPGPMGQKGAPGEYGVDGPEGTPG-QPGLTYEGAKGDRGM 250
+QG G+ G G G +G G GV G +G PG G+ +G +GM
Sbjct: 841 QQGVQGVQTAQGVQGVQGVQGVQGVQGVQGVQGVPGLLQGVQQVFGQGVQGM 892
Score = 32.3 bits (70), Expect = 0.005
Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +2
Query: 452 IGIYG-EQGLVGVKGETGDEGEAGFIGPPGLQGIEGDKG 565
+G+ G +QG+ GV+ G +G G G G+QG++G +G
Sbjct: 835 LGVQGVQQGVQGVQTAQGVQGVQGVQGVQGVQGVQGVQG 873
Score = 30.3 bits (65), Expect = 0.018
Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Frame = +2
Query: 464 GEQGLVGVKGETGDEGEAGFIGPPG-LQGIEGDKGDTLLPSDILPG-QPGDVGLPGFDGR 637
G QG+ GV+G G +G G G PG LQG++ G + ++ G Q G G +
Sbjct: 852 GVQGVQGVQGVQGVQGVQGVQGVPGLLQGVQQVFGQGVQGMNVPYGMQRGQSGGQTWSNS 911
Query: 638 --DGVAGIPGS 664
GVA +PGS
Sbjct: 912 QVQGVA-VPGS 921
Score = 28.3 bits (60), Expect = 0.075
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 464 GEQGLVGVKGETGDEGEAGFIGPPGLQGIEGDKG 565
G QG+ +G G +G G G G+QG++G G
Sbjct: 843 GVQGVQTAQGVQGVQGVQGVQGVQGVQGVQGVPG 876
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 27.1 bits (57), Expect = 0.17
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Frame = -1
Query: 301 PPRSWYP*VSSASRKTRHTTITFRSFIC*---SRLTWCAFRTIYSIFSWSSFLTHGTRPS 131
PPR P + R+ R T + S SR+ + F ++F W ++L+ R +
Sbjct: 395 PPRQTPPSRKESGRRRRRRTPRYNSVSKIDRASRIVFPLFFLAINVFYWFAYLSRSERIN 454
Query: 130 W*SVNS 113
+ +VNS
Sbjct: 455 YYNVNS 460
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 25.8 bits (54), Expect = 0.40
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = -3
Query: 683 GNHFDQKTLGFLLHHPVHQILAIQHHQVVQVKYLMEA 573
GNH T+G HH HQ ++QH Q L E+
Sbjct: 339 GNHTMGPTMGPPHHHHHHQTQSLQHLHYRQPPTLSES 375
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.8 bits (49), Expect = 1.6
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = -2
Query: 69 PGKPRGPWSPLSPMKP 22
P +P GPW P+ P
Sbjct: 133 PSRPMGPWVPMQEQIP 148
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.8 bits (49), Expect = 1.6
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = -2
Query: 69 PGKPRGPWSPLSPMKP 22
P +P GPW P+ P
Sbjct: 133 PSRPMGPWVPMQEQIP 148
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.8 bits (49), Expect = 1.6
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = -2
Query: 69 PGKPRGPWSPLSPMKP 22
P +P GPW P+ P
Sbjct: 133 PSRPMGPWVPMQEQIP 148
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.8 bits (49), Expect = 1.6
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = -2
Query: 69 PGKPRGPWSPLSPMKP 22
P +P GPW P+ P
Sbjct: 133 PSRPMGPWVPMQEQIP 148
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.8 bits (49), Expect = 1.6
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = -2
Query: 69 PGKPRGPWSPLSPMKP 22
P +P GPW P+ P
Sbjct: 133 PSRPMGPWVPMQEQIP 148
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.8 bits (49), Expect = 1.6
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = -2
Query: 69 PGKPRGPWSPLSPMKP 22
P +P GPW P+ P
Sbjct: 133 PSRPMGPWVPMQEQIP 148
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.8 bits (49), Expect = 1.6
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = -2
Query: 69 PGKPRGPWSPLSPMKP 22
P +P GPW P+ P
Sbjct: 133 PSRPMGPWVPMQEQIP 148
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 23.8 bits (49), Expect = 1.6
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = -2
Query: 69 PGKPRGPWSPLSPMKP 22
P +P GPW P+ P
Sbjct: 136 PSRPMGPWVPMQEQIP 151
>AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cyclase
alpha 1 subunit protein.
Length = 699
Score = 23.8 bits (49), Expect = 1.6
Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +2
Query: 521 FIGPPGLQGIEGDKGDTLLPSDI-LPGQPGDVGLPGFDGR 637
F+ P L G+EG G L SDI L DV L G R
Sbjct: 391 FVSSPFLNGLEGLTGRGLFISDIPLHDATRDVILVGEQAR 430
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 22.6 bits (46), Expect = 3.7
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +2
Query: 8 NEGLPGFIGERGDQGPR 58
N G PG G+ GD P+
Sbjct: 331 NPGPPGVPGDHGDHAPK 347
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 22.6 bits (46), Expect = 3.7
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +2
Query: 8 NEGLPGFIGERGDQGPR 58
N G PG G+ GD P+
Sbjct: 331 NPGPPGVPGDHGDHAPK 347
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 22.6 bits (46), Expect = 3.7
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +2
Query: 8 NEGLPGFIGERGDQGPR 58
N G PG G+ GD P+
Sbjct: 270 NPGPPGVPGDHGDHAPK 286
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 22.2 bits (45), Expect = 4.9
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = -2
Query: 621 GNPTSPGCPGKISDGSRVSPLS 556
G P S G P + D S PLS
Sbjct: 371 GTPISTGRPATVEDTSASLPLS 392
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 22.2 bits (45), Expect = 4.9
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = -2
Query: 621 GNPTSPGCPGKISDGSRVSPLS 556
G P S G P + D S PLS
Sbjct: 371 GTPISTGRPATVEDTSASLPLS 392
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 22.2 bits (45), Expect = 4.9
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = -2
Query: 621 GNPTSPGCPGKISDGSRVSPLS 556
G P S G P + D S PLS
Sbjct: 371 GTPISTGRPATVEDTSASLPLS 392
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 22.2 bits (45), Expect = 4.9
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = -2
Query: 621 GNPTSPGCPGKISDGSRVSPLS 556
G P S G P + D S PLS
Sbjct: 371 GTPISTGRPATVEDTSASLPLS 392
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 22.2 bits (45), Expect = 4.9
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = -2
Query: 621 GNPTSPGCPGKISDGSRVSPLS 556
G P S G P + D S PLS
Sbjct: 371 GTPISTGRPATVEDTSASLPLS 392
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 22.2 bits (45), Expect = 4.9
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = -2
Query: 621 GNPTSPGCPGKISDGSRVSPLS 556
G P S G P + D S PLS
Sbjct: 371 GTPISTGRPATVEDTSASLPLS 392
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.2 bits (45), Expect = 4.9
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = -2
Query: 621 GNPTSPGCPGKISDGSRVSPLS 556
G P S G P + D S PLS
Sbjct: 439 GTPISTGRPATVEDTSASLPLS 460
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.2 bits (45), Expect = 4.9
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = -2
Query: 621 GNPTSPGCPGKISDGSRVSPLS 556
G P S G P + D S PLS
Sbjct: 439 GTPISTGRPATVEDTSASLPLS 460
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 21.8 bits (44), Expect = 6.5
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -2
Query: 633 PSNPGNPTSPGCPGKISDGSRV 568
PS G PT PG SDG R+
Sbjct: 368 PSCGGGPTILTTPGLDSDGIRL 389
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.4 bits (43), Expect = 8.6
Identities = 10/33 (30%), Positives = 15/33 (45%)
Frame = +2
Query: 41 GDQGPRGLPGRNGEFPERGEQGKAGIDGLPGWP 139
G GP+ P ++ + P+RG PG P
Sbjct: 19 GAPGPQPSPHQSPQAPQRGSPPNPSQGPPPGGP 51
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,950
Number of Sequences: 438
Number of extensions: 4789
Number of successful extensions: 36
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21561255
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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